BAC Information

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BAC

Clone NameB6Ng01-025B19
Chromosome3 (Build37)
Map Location 17,885,795 - 17,993,980
singlet/doubletdoublet
Overlap geneLOC545508, Bhlhb5, Cyp7b1
Upstream geneLOC100040059, EG383936, LOC622737, ENSMUSG00000074674, LOC100040120, Cypt12
Downstream geneLOC622921, LOC100040153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025B19.bB6Ng01-025B19.g
ACCDH856553DH856554
length1,1361,164
definitionDH856553|Mus musculus domesticus DNA, BAC clone: B6Ng01-025B19, 5' end.DH856554|Mus musculus domesticus DNA, BAC clone: B6Ng01-025B19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,992,832 - 17,993,980)(17,885,795 - 17,886,958)
sequence
gaattccaaagactatgtttgtagtcttcacataattattactcttaaca
atttgcttgaaattcatcaactctctgtttattgctagcaagcaactgtt
tgttattgaaataaaaaggttgtgtttaaagtgcactgttaagaaagaaa
tgcttagatttttgtcttagtccactttgtattcctgcacaaaatatcat
accaagaagcaagtttgggatgaaaggatttattcagcttgcacttccaa
actgcttttcaccaccaaaggaagtcaggactggaactcaagcatgtcag
gaagcaggcgctggtgcagaggccatggagagatgctgcttcctggattg
ctttcctggcttgctcagcttgccttgtcatagaagccaggactacttgt
cctgggatggcaccactcacaatgagcccttccacccttgatcactaatt
gagaaaatgccttacagatggttttcatggaggcatttcctcaagggaag
ctccttttttgtgataactccagcttatgtcacattgacacacaaaacaa
gtcagtacagatttattgaaccagaagaaatgtcaagttctgaacttgta
attttggtctatgaaggtcaacagctagacttagggactcttatcttgga
cccctcacagctctcccgtgcttacccaatgtatagaaacaacaaatgtt
ttatatgtaattctactcttatacattacatcccctccctccattcctca
cagtctctcaacccctgcaaccttccctttcctccatttgtcttcataaa
agagctgaccttacagggcatcagccaaatgtggcagagtaagatgcagt
gagactacacacaaaccctcaaatccaagctgcattagacaacttactaa
taagaaatagtccccacaatcaggccaaagagtcagagatatcccgatcc
tattggaatgagtcccacagaaacacaagctacacagacacatacacaca
cacacacacgtgtgtaataaattcagagagctaaacaaccctcatagctt
cgtgtgtcgccttagttcttgtggcccatgagccctgctagtgatctgtt
ggcagtgttctctggcgtccttttaacctctacctc
gaattcacccaacatctgacatattaaaaatggcacaagtccacattttg
taatgtgtatcaacattgcacagttaagaactacagaattctagattaga
caggtcttctcaaaacaaacagcatcgatcccagtccttctcagagcacc
aagctgttggaccccgtggatctccaggccaatagcagtcccctgagata
gcacagggtaaataattctacctcaggcatctaggtcattgtgtgatgcc
aatgtagaagaggaacttatagatccttatgatcaaatgtgttctatttc
tcaaaatagagtgatttactcacctcaggtctcatctttccaggaaaact
ttccatagaacatataagtatttaagctgaaatctgaaggaaaataaaga
attaagcagatgggggagtgggcgaaacctctgctgatgtgaacttatga
catattggaacattcttaccctgtatttgtatggatcatgagatacacac
tcagttttactaatatcatgctacttactagttctgcatggaaatagttc
ttcttggtgagaaagtcactgaacattttgtcttgttcactgtttatatt
aacatctctacacttttgaaaaagcttctctagcagggtaaataacttct
gtatgacacatatctatcactagggaacaggatatgtctcagtgtgagaa
tattttcctcacctttaaaaggccttgcatcccatccttagcattgaaga
attaaacaaaactaaaccagcaaccatgacaatggtaataagaagcaaga
aaatttcctattttattttttgaaaaatattgtgtgtctctggaagattt
gttcttgtgcatgtgtgtatattctcttcataatcatacaaaccaagatc
tacagggtgacatgtgacagaaaactaaactcaaaatacctggggcaaac
ataagcattgggtatcttaagtaacttgaaatggagagttctgtgctgta
ctaggatgattgcatattatcataagctgcttcctcttcagtcttggctc
tttttctgtatttttcactttaaggtatgttttctctacatggggatcac
aataggctctaggcagatccatatggactaagaaactgttatattgtccc
aaatacccaaatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_17992832_17993980
seq2: B6Ng01-025B19.b_43_1178 (reverse)

seq1  GAGGTAGAGGTAAAGAGGACGCCAGGAGAACACTGCCCACAGAATCAACT  50
      ||||||||||| || ||||||||| |||||||||||| |||| ||| |||
seq2  GAGGTAGAGGTTAAAAGGACGCCA-GAGAACACTGCCAACAG-ATC-ACT  47

seq1  AAGCAGGGCTCATGGGGCCCACAGAAACTAAGGCGACAACCACGGAGCCT  100
       |||||||||||||||  |||||  |||||||||||||  |||| || ||
seq2  -AGCAGGGCTCATGGG--CCACAAGAACTAAGGCGACA--CACGAAG-CT  91

seq1  ATGAGGGTTTGTGTTAGGCTCTCTGAATTTATTACACACGTGTGTGTGTG  150
      ||||||||   ||||  |||||||||||||||||||||||||||||||||
seq2  ATGAGGGT---TGTTTAGCTCTCTGAATTTATTACACACGTGTGTGTGTG  138

seq1  TGTGTATGTGTCTGTGTAGCTTGGTGTTTCTGTGGGACTCATTCCAATAG  200
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGTGTATGTGTCTGTGTAGCTT-GTGTTTCTGTGGGACTCATTCCAATAG  187

seq1  GATCGGGATATCTCTGACTCTTTGGCCTGATTGT-GGGACTATTTTCTTA  249
      |||||||||||||||||||||||||||||||||| ||||||| |||||||
seq2  GATCGGGATATCTCTGACTCTTTGGCCTGATTGTGGGGACTA-TTTCTTA  236

seq1  TTAGTAAGTTGTCTAATGCAGCTTGGATTTGAGGGTTTGTGTGTAGTCTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAAGTTGTCTAATGCAGCTTGGATTTGAGGGTTTGTGTGTAGTCTC  286

seq1  ACTGCATCTTACTCTGCCACATTTGGCTGATGCCCTGTAAGGTCAGCTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATCTTACTCTGCCACATTTGGCTGATGCCCTGTAAGGTCAGCTCT  336

seq1  TTTATGAAGACAAATGGAGGAAAGGGAAGGTTGCAGGGGTTGAGAGACTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAAGACAAATGGAGGAAAGGGAAGGTTGCAGGGGTTGAGAGACTG  386

seq1  TGAGGAATGGAGGGAGGGGATGTAATGTATAAGAGTAGAATTACATATAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAATGGAGGGAGGGGATGTAATGTATAAGAGTAGAATTACATATAA  436

seq1  AACATTTGTTGTTTCTATACATTGGGTAAGCACGGGAGAGCTGTGAGGGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AACATTTGTTGTTTCTATACATTGGGTAAGCACGGGAGAGCTGTGAGGGG  486

seq1  TCCAAGATAAGAGTCCCTAAGTCTAGCTGTTGACCTTCATAGACCAAAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGATAAGAGTCCCTAAGTCTAGCTGTTGACCTTCATAGACCAAAAT  536

seq1  TACAAGTTCAGAACTTGACATTTCTTCTGGTTCAATAAATCTGTACTGAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGTTCAGAACTTGACATTTCTTCTGGTTCAATAAATCTGTACTGAC  586

seq1  TTGTTTTGTGTGTCAATGTGACATAAGCTGGAGTTATCACAAAAAAGGAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGTGTGTCAATGTGACATAAGCTGGAGTTATCACAAAAAAGGAG  636

seq1  CTTCCCTTGAGGAAATGCCTCCATGAAAACCATCTGTAAGGCATTTTCTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTTGAGGAAATGCCTCCATGAAAACCATCTGTAAGGCATTTTCTC  686

seq1  AATTAGTGATCAAGGGTGGAAGGGCTCATTGTGAGTGGTGCCATCCCAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTGATCAAGGGTGGAAGGGCTCATTGTGAGTGGTGCCATCCCAGG  736

seq1  ACAAGTAGTCCTGGCTTCTATGAGAAGGCAAGCTGAGCAAGCCAGGAAAG  799
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACAAGTAGTCCTGGCTTCTATGACAAGGCAAGCTGAGCAAGCCAGGAAAG  786

seq1  CAATCCAGGAAGCAGCATCTCTCCATGGCCTCTGCACCAGCGCCTGCTTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCAGGAAGCAGCATCTCTCCATGGCCTCTGCACCAGCGCCTGCTTC  836

seq1  CTGACATGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGGTGAAAAGCAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGGTGAAAAGCAGT  886

seq1  TTGGAAGTGCAAGCTGAATAAATCCTTTCATCCCAAACTTGCTTCTTGGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGTGCAAGCTGAATAAATCCTTTCATCCCAAACTTGCTTCTTGGT  936

seq1  ATGATATTTTGTGCAGGAATACAAAGTGGACTAAGACAAAAATCTAAGCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATTTTGTGCAGGAATACAAAGTGGACTAAGACAAAAATCTAAGCA  986

seq1  TTTCTTTCTTAACAGTGCACTTTAAACACAACCTTTTTATTTCAATAACA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTAACAGTGCACTTTAAACACAACCTTTTTATTTCAATAACA  1036

seq1  AACAGTTGCTTGCTAGCAATAAACAGAGAGTTGATGAATTTCAAGCAAAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTGCTTGCTAGCAATAAACAGAGAGTTGATGAATTTCAAGCAAAT  1086

seq1  TGTTAAGAGTAATAATTATGTGAAGACTACAAACATAGTCTTTGGAATTC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGAGTAATAATTATGTGAAGACTACAAACATAGTCTTTGGAATTC  1136

seq1: chr3_17885795_17886958
seq2: B6Ng01-025B19.g_66_1229

seq1  GAATTCACCCAACATCTGACATATTAAAAATGGCACAAGTCCACATTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCAACATCTGACATATTAAAAATGGCACAAGTCCACATTTTG  50

seq1  TAATGTGTATCAACATTGCACAGTTAAGAACTACAGAATTCTAGATTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGTATCAACATTGCACAGTTAAGAACTACAGAATTCTAGATTAGA  100

seq1  CAGGTCTTCTCAAAACAAACAGCATCGATCCCAGTCCTTCTCAGAGCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCTTCTCAAAACAAACAGCATCGATCCCAGTCCTTCTCAGAGCACC  150

seq1  AAGCTGTTGGACCCCGTGGATCTCCAGGCCAATAGCAGTCCCCTGAGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTTGGACCCCGTGGATCTCCAGGCCAATAGCAGTCCCCTGAGATA  200

seq1  GCACAGGGTAAATAATTCTACCTCAGGCATCTAGGTCATTGTGTGATGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGGGTAAATAATTCTACCTCAGGCATCTAGGTCATTGTGTGATGCC  250

seq1  AATGTAGAAGAGGAACTTATAGATCCTTATGATCAAATGTGTTCTATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGAAGAGGAACTTATAGATCCTTATGATCAAATGTGTTCTATTTC  300

seq1  TCAAAATAGAGTGATTTACTCACCTCAGGTCTCATCTTTCCAGGAAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATAGAGTGATTTACTCACCTCAGGTCTCATCTTTCCAGGAAAACT  350

seq1  TTCCATAGAACATATAAGTATTTAAGCTGAAATCTGAAGGAAAATAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATAGAACATATAAGTATTTAAGCTGAAATCTGAAGGAAAATAAAGA  400

seq1  ATTAAGCAGATGGGGGAGTGGGCGAAACCTCTGCTGATGTGAACTTATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGCAGATGGGGGAGTGGGCGAAACCTCTGCTGATGTGAACTTATGA  450

seq1  CATATTGGAACATTCTTACCCTGTATTTGTATGGATCATGAGATACACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTGGAACATTCTTACCCTGTATTTGTATGGATCATGAGATACACAC  500

seq1  TCAGTTTTACTAATATCATGCTACTTACTAGTTCTGCATGGAAATAGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTTACTAATATCATGCTACTTACTAGTTCTGCATGGAAATAGTTC  550

seq1  TTCTTGGTGAGAAAGTCACTGAACATTTTGTCTTGTTCACTGTTTATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGTGAGAAAGTCACTGAACATTTTGTCTTGTTCACTGTTTATATT  600

seq1  AACATCTCTACACTTTTGAAAAAGCTTCTCTAGCAGGGTAAATAACTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTCTACACTTTTGAAAAAGCTTCTCTAGCAGGGTAAATAACTTCT  650

seq1  GTATGACACATATCTATCACTAGGGAACAGGATATGTCTCAGTGTGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGACACATATCTATCACTAGGGAACAGGATATGTCTCAGTGTGAGAA  700

seq1  TATTTTCCTCACCTTTAAAAGGCCTTGCATCCCATCCTTAGCATTGAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCCTCACCTTTAAAAGGCCTTGCATCCCATCCTTAGCATTGAAGA  750

seq1  ATTAAACAAAACTAAACCAGCAACCATGACAATGGTAATAAGAAGCAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACAAAACTAAACCAGCAACCATGACAATGGTAATAAGAAGCAAGA  800

seq1  AAATTTCCTATTTTATTTTTTGAAAAATATTGTGTGTCTCTGGAAGATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCCTATTTTATTTTTTGAAAAATATTGTGTGTCTCTGGAAGATTT  850

seq1  GTTCTTGTGCATGTGTGTATATTCTCTTCATAATCATACAAACCAAGATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGTGCATGTGTGTATATTCTCTTCATAATCATACAAACCAAGATC  900

seq1  TACAGGGTGACATGTGACAGAAAACTAAACTCAAAATACCTGGGGCAAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGGTGACATGTGACAGAAAACTAAACTCAAAATACCTGGGGCAAAC  950

seq1  ATAAGCATTGGGTATCTTAAGTAACTTGAAATGGAGAAGTTCTGTGCTGT  1000
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATAAGCATTGGGTATCTTAAGTAACTTGAAATGGAG-AGTTCTGTGCTGT  999

seq1  CACTAGGATGATTGCAATATTATCATAAGCTGTCTCCTCTTCAGTCTTTG  1050
       |||||||||||||| ||||||||||||||||  |||||||||||||| |
seq2  -ACTAGGATGATTGC-ATATTATCATAAGCTGCTTCCTCTTCAGTCTTGG  1047

seq1  CTC-TTATCTGTATTTTTTCACTTTTAGGTATGTTTTCTCTACATTGTGA  1099
      ||| || |||||| ||||||||||| ||||||||||||||||||| | ||
seq2  CTCTTTTTCTGTA-TTTTTCACTTTAAGGTATGTTTTCTCTACATGGGGA  1096

seq1  TCCACATA-GCTCTAGGCAGATCAATAT-GACT-AGAAACTGTATTATTG  1146
      ||   ||| |||||||||||||| |||| |||| |||||||||  |||||
seq2  TCACAATAGGCTCTAGGCAGATCCATATGGACTAAGAAACTGTTATATTG  1146

seq1  TCCAAAATAACAAAATTA  1164
      ||| ||||| | ||||||
seq2  TCCCAAATACCCAAATTA  1164