BAC Information

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BAC

Clone NameB6Ng01-027N02
Chromosome3 (Build37)
Map Location 7,220,380 - 7,220,941
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041214, LOC383818, 1700008P02Rik, LOC100039349, Olfr289-ps1, EG667801
Downstream genePkia, LOC667807, 3110050N22Rik, Il7, LOC620822, LOC633072
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027N02.bB6Ng01-027N02.g
ACCDH858461DH858462
length1,064947
definitionDH858461|Mus musculus domesticus DNA, BAC clone: B6Ng01-027N02, 5' end.DH858462|Mus musculus domesticus DNA, BAC clone: B6Ng01-027N02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttaattttatctgcacttattttatgctgaatttattcccat
gccataagttattgtttcttctgggatatttcttgtttatttatttatta
taacccaaatgttgcctctttcctggttctctcctcacagagtctctctc
ctcacctccccttcggtggaatcccttccatgtactgcctactcttgccc
atcaaatcaatgtaggattagtcacatcatttcttacggaggccagacaa
ggcagatttgttgtagaatagattaaacaatcaggcaatagctttagggc
atcctccacttcaactgttggggaatctacatggagcctgagctgcactt
ctgttgtatatgtgctgggggagttggtacagcctgtgtattttctttgg
ttggtgcctcagtctctgagaactcccagagatccaggttagtggactgt
gttggttttcctgtggtgttctcattcccttcattgccttcaatctttcc
cctaacacttctataagagtcctcaagttccttccaatgtttggctgaag
gtatctgcatctttttcagtcagttgctgggtggagactctcagaggaca
gttatgctagacttctgtctccaaacataacagagtatcatgaagagtgt
cagggattagtgcttgcccatgggatggggctcaagttgggcctgttatt
gatggccattccttcagtctctgttccatctctgtccctgcatttctttt
agacaggacacattttgggttggaatttttcagtgtgggttggggtcctt
atcttttcactggggtcctgcaaggctacaggagatgacctcttcagatt
ctatattccccacttttaggtgtcttgactaaagtcacatgaatttgacc
cctggtagcctctctcatctcaagcctctgggactcctagagattccctc
aaatcttcccacccatggcaactgcagatttccattcattctcttgaccc
ttggggatgctttattctagaagaaggaataaaatttcataggatgggtg
ggaggagggatatg
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaagaatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcatccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgttgggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttccctgccgtctactcctcttgggtgatttgcttctttttttctagagc
tttagatgtgttgtcagctgctagtatggtgctcctcccctgttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_7220380_7220941
seq2: B6Ng01-027N02.g_453_1013 (reverse)

seq1  AAAAACGGGAGA-GAGCA-CATACTAGCAGCTTGACAACACATCTAAAAG  48
      |||||| || || ||||| |||||||||||| ||||||||||||| ||||
seq2  AAAAACAGGGGAGGAGCACCATACTAGCAGC-TGACAACACATCT-AAAG  48

seq1  CTCTAGAAAAAAAGGAAGCAAATTCACCCAAGAGGAGTAGACGGCA-GGA  97
      ||||||||||||| |||||||| ||||||||||||||||||||||| |||
seq2  CTCTAGAAAAAAA-GAAGCAAA-TCACCCAAGAGGAGTAGACGGCAGGGA  96

seq1  AATAATCAAACTCAGGGGTGAAATCAACCAAGTGGAAACAAGAAGAACTA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCAAACTCAGGGGTGAAATCAACCAAGTGGAAACAAGAAGAACTA  146

seq1  TTCAAAGAATTAACCAAACGAGGAGTTGGTTCTTTGAGAAAATCAACAAG  197
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTCAAAGAATTAACCCAACGAGGAGTTGGTTCTTTGAGAAAATCAACAAG  196

seq1  ATAGATAAACCCTTAGCTAGACTCACTAAAGGGCACAGGGACAAAATCCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAAACCCTTAGCTAGACTCACTAAAGGGCACAGGGACAAAATCCT  246

seq1  AATTAACAAAATCAGAAATGAAAAGGGAGACATAACAACAGATCCTGAAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAACAAAATCAGAAATGAAAAGGGAGACATAACAACAGATCCTGAAG  296

seq1  AAATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAAAA  346

seq1  CTGGAAAACCTGGATGAAATGGACAAATTTCTGGACAGATACCAGGTACC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAACCTGGATGAAATGGACAAATTTCTGGACAGATACCAGGTACC  396

seq1  AAAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCATATCCCCTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCATATCCCCTA  446

seq1  AAGAAATAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGGA  496

seq1  CCAGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAAC  546

seq1  TCCAGTTCTGCACAA  562
      |||||||||||||||
seq2  TCCAGTTCTGCACAA  561