BAC Information

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BAC

Clone NameB6Ng01-029C09
Chromosome3 (Build37)
Map Location 12,131,286 - 12,131,819
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667999
Downstream geneEG621965, LOC100039798, EG668033, LOC668037
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029C09.bB6Ng01-029C09.g
ACCDH859431DH859432
length967129
definitionDH859431|Mus musculus domesticus DNA, BAC clone: B6Ng01-029C09, 5' end.DH859432|Mus musculus domesticus DNA, BAC clone: B6Ng01-029C09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgacttaattatttagacatcactgctggctacagtcacaatc
atgcacaagctagaactgggaagataactaaagaaaaatttcagagtgtg
tctcaggatacatttattatagcacatatgaaagaaagccctggaacctg
aactgtgcctcaagcattccatgactgaactacattgctaccctatttat
tatttttatttgcttgttataaaaactctttcagtgaggttatatgtgat
tgacttagttctacaaagcctaacctagttatcaggttttttcttattta
tttatggtgacgttacttcaaaatttctgtatatcaataactgattttat
ttgctgttctttacaataccagcagtaattctaagtttctttcttttttt
ttttcaatttttattaggtatttagctcatttacatttccaatgctatat
caaaagtcccccatacccacccacccccactcccctacccacccactccc
cctttttggccctggcgttcccctgtactggggcatatgaagtttgcaag
tccaatgggcctctctttccagtgatggctgactaggccatcttttgata
catatgcagctagagtcaagagctcctgggtactggatagttcataatgt
tgttccacctatagggttgcagatccctttagctccttgggtactttctc
tagctcctcctttgggagccctgtgatccatccattagctgtctgtgagc
atccacttctgtgtttgctaggccccggcataatctcacaagagacagct
acatctgggtcctttcaataaaatcttgctagtgcatgcaatggtgtcag
cgattggatgctgattatggggtgaatccctggatatggcagtctctaca
tggtccattctttcatctcagctcaaactttgtctctgtactccttccat
gggtgtatgttcccact
ctggcccctgaatggacatcattgtctgtcctcagttagagaggatgttc
cttgtcccgcaagaatttgatgtgctttgtgggctgggaaaggtgtggga
ctaaggtggaagggtgtgggagtgggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_12131286_12131819
seq2: B6Ng01-029C09.b_47_580 (reverse)

seq1  GCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGGAGTGGGTGGGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGGAGTGGGTGGGTAG  50

seq1  GGGAGTGGGGGTGGGTGGGTATGGGGGACTTTTGATATAGCATTGGAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTGGGGGTGGGTGGGTATGGGGGACTTTTGATATAGCATTGGAAAT  100

seq1  GTAAATGAGCTAAATACCTAATAAAAATTGAAAAAAAAAAAGAAAGAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGAGCTAAATACCTAATAAAAATTGAAAAAAAAAAAGAAAGAAAC  150

seq1  TTAGAATTACTGCTGGTATTGTAAAGAACAGCAAATAAAATCAGTTATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATTACTGCTGGTATTGTAAAGAACAGCAAATAAAATCAGTTATTG  200

seq1  ATATACAGAAATTTTGAAGTAACGTCACCATAAATAAATAAGAAAAAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAGAAATTTTGAAGTAACGTCACCATAAATAAATAAGAAAAAACC  250

seq1  TGATAACTAGGTTAGGCTTTGTAGAACTAAGTCAATCACATATAACCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAACTAGGTTAGGCTTTGTAGAACTAAGTCAATCACATATAACCTCA  300

seq1  CTGAAAGAGTTTTTATAACAAGCAAATAAAAATAATAAATAGGGTAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGAGTTTTTATAACAAGCAAATAAAAATAATAAATAGGGTAGCAA  350

seq1  TGTAGTTCAGTCATGGAATGCTTGAGGCACAGTTCAGGTTCCAGGGCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTCAGTCATGGAATGCTTGAGGCACAGTTCAGGTTCCAGGGCTTT  400

seq1  CTTTCATATGTGCTATAATAAATGTATCCTGAGACACACTCTGAAATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATATGTGCTATAATAAATGTATCCTGAGACACACTCTGAAATTTT  450

seq1  TCTTTAGTTATCTTCCCAGTTCTAGCTTGTGCATGATTGTGACTGTAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAGTTATCTTCCCAGTTCTAGCTTGTGCATGATTGTGACTGTAGCC  500

seq1  AGCAGTGATGTCTAAATAATTAAGTCATGAATTC  534
      ||||||||||||||||||||||||||||||||||
seq2  AGCAGTGATGTCTAAATAATTAAGTCATGAATTC  534