BAC Information

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BAC

Clone NameB6Ng01-032G02
Chromosome3 (Build37)
Map Location 43,793,013 - 43,922,849
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC677788, LOC100039264
Downstream geneLOC676484
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032G02.bB6Ng01-032G02.g
ACCDH861735DH861736
length982909
definitionDH861735|Mus musculus domesticus DNA, BAC clone: B6Ng01-032G02, 5' end.DH861736|Mus musculus domesticus DNA, BAC clone: B6Ng01-032G02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,921,865 - 43,922,849)(43,793,013 - 43,793,914)
sequence
gaattcttgataagaaattttccagtgtagatattgtaatctttgggaat
ttgtggttcacttgtaacttatatcattatggtttgttctctatggaaaa
tttatttctggttttactacctatgggctttgtgacttgaatttttgtca
tagaacatacttcttattttaactttgtatcgctttaaaataataatatg
taactctttctctattctttgcctgtcttgtatacttctagctttccagt
tcatttgttgttcaggtgtatgtatgtatattagtgttagctgtcttgcc
caataactataatattttaatcaataatttaatttttgctcatgtgaaaa
tatttagtactgttttttacaataatttagtgagaggaagtttttaaatc
aataaacagtttaaaaagaagaagtgtagccaggcatggtgacatatgcc
tttaattccagcacttgggaggcagaggcaggcagatttctgagttggag
gccaccctggtctacaaagtgagttccaggacagccagtgatacacagag
aaaccctgtctcgagccccccacccccagaaaaaaagaagtgtattgaat
agacaaacaagtgtcacttaagatgtgttatagattaatacttgtgtttt
tcaggtgtcaatatatacctgttgtgctttctgagaaaaaactggaaaat
aatctgtcttttcactaggtctttcatccaacagctttctttttagtgaa
ctcatttcaacaaacatgactcaatttactaaatcaagaagttaatcaga
aaaaataagtatctaggatatattaaaacattttataacagggttgggaa
gtgggctcaatgggtgaagtgctttatcggtaagcatgaggaacagagtt
cagcttcccagagctcataagaagcaggtggtgagcagtggcctgtaatc
ttagcactatgagtaggagaaaggggatccag
gaattcaaacatgataggtattttagatttttaatatctcttaaatcaca
catgttgctaatgaatgtttcacaaatggaccacatgaaagtaaatctca
attcaacttggcttggttatactttcatatatttgaagaagaaaaccagt
agtagagagtgaatacatttgtaactatgtggcagtctgaatgtaattgt
attgctatataaaaatcactatatgttagtaaagttttgaatctggaact
gttacatgttcatgggtgtgtaattatggtagtctccaagcacatgtatg
gaagctacacaatgtcttgctctggcaatctctggtgttaatctacaact
agaatatgtctatttttgtacttcacgagctgagatatatattcagatta
ttattattcttgcacaggtgttctgacccacagcaatcactccaattccc
acctcccaataattaattaatatagaagcatcatgttagaatcacatccc
ctaaaattcactccttaggtagtgtatattgacgaagaaatatatggtcc
tcattttcataataatttagaatcatgtttattttcatctaatggaaccc
aattagcgcagttatgattctcttgggttgttttcttttataaatcagac
atccaaatatttcaaaaagaattttcaacaaactaagatgcataattact
tgaagtttaatttagaaatccagtttacttgataaacataaactgcaaca
gagaacatatgttttctaacttcatgatgtaatatttttatgttgcactt
actttaaaattaatatttataaattttgaaagacatgtgatttttggcct
aagaaatataattaatatattatacttaatttggagatactcactttgta
taatttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_43921865_43922849
seq2: B6Ng01-032G02.b_44_1025 (reverse)

seq1  CTGGAATCCCCTGTCTCCTCCTCCTAAGTGCTAAGATTACAGGCCACCTG  50
      |||| ||||||| |||||| ||| | |||||||||||||||||||| |||
seq2  CTGG-ATCCCCTTTCTCCTACTCAT-AGTGCTAAGATTACAGGCCA-CTG  47

seq1  CTCACCACCTGCCTTCTTATGAGCTCTGGGAAGCTGAACTCTGTTCCTCA  100
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTCACCACCTG-CTTCTTATGAGCTCTGGGAAGCTGAACTCTGTTCCTCA  96

seq1  TGCTTACCGATAAAGCACTTCACCCATTGAGCCAACTTCCCAACCCTGTT  150
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGCTTACCGATAAAGCACTTCACCCATTGAGCCCACTTCCCAACCCTGTT  146

seq1  ATAAAATGTTTTAATATATCCTAGATACTTATTTTTTCTGATTAACTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATGTTTTAATATATCCTAGATACTTATTTTTTCTGATTAACTTCT  196

seq1  TGATTTAGTAAATTGAGTCATGTTTGTTGAAATGAGTTCACTAAAAGGAA  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGATTTAGTAAATTGAGTCATGTTTGTTGAAATGAGTTCACTAAAAAGAA  246

seq1  AGCTGTTGGATGAAAGACCTAGTG-AAAGACAGATTATTTTCCAGTTTTT  299
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGCTGTTGGATGAAAGACCTAGTGAAAAGACAGATTATTTTCCAGTTTTT  296

seq1  TCTCAGAAAGCACAACAGGTATATATTGACACCTGAAAAACACAAGTATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAAAGCACAACAGGTATATATTGACACCTGAAAAACACAAGTATT  346

seq1  AATCTATAACACATCTTAAGTGACACTTGTTTGTCTATTCAATACACTTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATAACACATCTTAAGTGACACTTGTTTGTCTATTCAATACACTTC  396

seq1  TTTTTTTCTGGGGGTGGGGGGCTCGAGACAGGGTTTCTCTGTGTATCACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCTGGGGGTGGGGGGCTCGAGACAGGGTTTCTCTGTGTATCACT  446

seq1  GGCTGTCCTGGAACTCACTTTGTAGACCAGGGTGGCCTCCAACTCAGAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTCCTGGAACTCACTTTGTAGACCAGGGTGGCCTCCAACTCAGAAA  496

seq1  TCTGCCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGCATATGTCACCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTGCCTCTGCCTCCCAAGTGCTGGAATTAAAGGCATATGTCACCA  546

seq1  TGCCTGGCTACACTTCTTCTTTTTAAACTGTTTATTGATTTAAAAACTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGCTACACTTCTTCTTTTTAAACTGTTTATTGATTTAAAAACTTC  596

seq1  CTCTCACTAAATTATTGTAAAAAACAGTACTAAATATTTTCACATGAGCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACTAAATTATTGTAAAAAACAGTACTAAATATTTTCACATGAGCA  646

seq1  AAAATTAAATTATTGATTAAAATATTATAGTTATTGGGCAAGACAGCTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAAATTATTGATTAAAATATTATAGTTATTGGGCAAGACAGCTAA  696

seq1  CACTAATATACATACATACACCTGAACAACAAATGAACTGGAAAGCTAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATATACATACATACACCTGAACAACAAATGAACTGGAAAGCTAGA  746

seq1  AGTATACAAGACAGGCAAAGAATAGAGAAAGAGTTACATATTATTATTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATACAAGACAGGCAAAGAATAGAGAAAGAGTTACATATTATTATTTT  796

seq1  AAAGCGATACAAAGTTAAAATAAGAAGTATGTTCTATGACAAAAATTCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCGATACAAAGTTAAAATAAGAAGTATGTTCTATGACAAAAATTCAA  846

seq1  GTCACAAAGCCCATAGGTAGTAAAACCAGAAATAAATTTTCCATAGAGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAAAGCCCATAGGTAGTAAAACCAGAAATAAATTTTCCATAGAGAA  896

seq1  CAAACCATAATGATATAAGTTACAAGTGAACCACAAATTCCCAAAGATTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCATAATGATATAAGTTACAAGTGAACCACAAATTCCCAAAGATTA  946

seq1  CAATATCTACACTGGAAAATTTCTTATCAAGAATTC  985
      ||||||||||||||||||||||||||||||||||||
seq2  CAATATCTACACTGGAAAATTTCTTATCAAGAATTC  982

seq1: chr3_43793013_43793914
seq2: B6Ng01-032G02.g_67_975

seq1  GAATTCAAACATGATAGGTATTTTAGATTTTTAATATCTCTTAAATCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACATGATAGGTATTTTAGATTTTTAATATCTCTTAAATCACA  50

seq1  CATGTTGCTAATGAATGTTTCACAAATGGACCACATGAAAGTAAATCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGCTAATGAATGTTTCACAAATGGACCACATGAAAGTAAATCTCA  100

seq1  ATTCAACTTGGCTTGGTTATACTTTCATATATTTGAAGAAGAAAACCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACTTGGCTTGGTTATACTTTCATATATTTGAAGAAGAAAACCAGT  150

seq1  AGTAGAGAGTGAATACATTTGTAACTATGTGGCAGTCTGAATGTAATTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGAGTGAATACATTTGTAACTATGTGGCAGTCTGAATGTAATTGT  200

seq1  ATTGCTATATAAAAATCACTATATGTTAGTAAAGTTTTGAATCTGGAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTATATAAAAATCACTATATGTTAGTAAAGTTTTGAATCTGGAACT  250

seq1  GTTACATGTTCATGGGTGTGTAATTATGGTAGTCTCCAAGCACATGTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATGTTCATGGGTGTGTAATTATGGTAGTCTCCAAGCACATGTATG  300

seq1  GAAGCTACACAATGTCTTGCTCTGGCAATCTCTGGTGTTAATCTACAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTACACAATGTCTTGCTCTGGCAATCTCTGGTGTTAATCTACAACT  350

seq1  AGAATATGTCTATTTTTGTACTTCACGAGCTGAGATATATATTCAGATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATGTCTATTTTTGTACTTCACGAGCTGAGATATATATTCAGATTA  400

seq1  TTATTATTCTTGCACAGGTGTTCTGACCCACAGCAATCACTCCAATTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTCTTGCACAGGTGTTCTGACCCACAGCAATCACTCCAATTCCC  450

seq1  ACCTCCCAATAATTAATTAATATAGAAGCATCATGTTAGAATCACATCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCCAATAATTAATTAATATAGAAGCATCATGTTAGAATCACATCCC  500

seq1  CTAAAATTCACTCCTTAGGTAGTGTATATTGACGAAGAAATATATGGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATTCACTCCTTAGGTAGTGTATATTGACGAAGAAATATATGGTCC  550

seq1  TCATTTTCATAATAATTTAGAATCATGTTTATTTTCATCTAATGGAACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTCATAATAATTTAGAATCATGTTTATTTTCATCTAATGGAACCC  600

seq1  AATTAGCGCAGTTATGATTCTCTTGGGTTGTTTTCTTTTATAAATCAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGCGCAGTTATGATTCTCTTGGGTTGTTTTCTTTTATAAATCAGAC  650

seq1  ATCCAAATATTTCAAAAAGAATTTTCAACAAACTAAGATGCATAATTACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAATATTTCAAAAAGAATTTTCAACAAACTAAGATGCATAATTACT  700

seq1  TGAAGTT--AATTAGAAATCCAGTTTACTTGATAAACATAAACTGCAACA  748
      |||||||  | |||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTTAATTTAGAAATCCAGTTTACTTGATAAACATAAACTGCAACA  750

seq1  GAGAACATATG-TTTCTAACTTCATGATGTAATATTTTTATGTTGCACTT  797
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GAGAACATATGTTTTCTAACTTCATGATGTAATATTTTTATGTTGCACTT  800

seq1  ACTTTAAAATTAATATTTATAAATTT--GAAGACATGTGATTTTTGGCCT  845
      ||||||||||||||||||||||||||   |||||||||||||||||||||
seq2  ACTTTAAAATTAATATTTATAAATTTTGAAAGACATGTGATTTTTGGCCT  850

seq1  AAGAAATATAATT-ATATATTATACTTAATTT-GTGATACTCACTTTGTA  893
      ||||||||||||| |||||||||||||||||| | |||||||||||||||
seq2  AAGAAATATAATTAATATATTATACTTAATTTGGAGATACTCACTTTGTA  900

seq1  TTATTTTTT  902
      | |||||||
seq2  TAATTTTTT  909