BAC Information

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BAC

Clone NameB6Ng01-032G06
Chromosome3 (Build37)
Map Location 61,666,950 - 61,668,036
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666853, P2ry1, Rap2b, LOC666891
Downstream geneLOC669910, LOC676965, 4631416L12Rik, Dhx36, Gpr149
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032G06.bB6Ng01-032G06.g
ACCDH861743DH861744
length1,0821,156
definitionDH861743|Mus musculus domesticus DNA, BAC clone: B6Ng01-032G06, 5' end.DH861744|Mus musculus domesticus DNA, BAC clone: B6Ng01-032G06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctggcttgaatatgaaccggtggaaataggcagacatatgagaa
tgctcaatggaactcaaaggtaggatatgctactcataaaatccagtgca
gatactctagggaatacaatggtttttacatctatttacctgtctgatgt
tttatcttataaaattggtttccagattacagtagagtagtatatggaat
taaattagtgaaggagggaaatattacataactaaaggatccttggtgca
ggaaggatttttgactttgctttctacactgtttctgggtgagaatgtca
cacagtattgttagatttttccagtgactgaaacctttcagtgaggcatt
ggatttgtttgtgagttgtcagggcactaaggaacatttgatcttttgtg
gaatacttcactttagcaggatcttcctcagttattcaaaacagtaacat
ctttttcactctgttatcaaagtaacacatcatatgtgatagtctcagtt
ctatttccaagttaaatgtcctatcatatgaaaactttccctccatgttc
agaagtctgttttgacagtcttcattggacataagaaacataattgcaag
aagcagtgagaaatagaggccaaattggctactttagggtctctgaaagt
ttgtcaaatgtttcacataaactctgtacaatgctgttaattttcagaaa
cagcctttgtatattcaaaaaattttcatgaaaggtaaaagctatatgag
aatattggttgaatgggaactattctgtacttggttaactgaacacacaa
tttttctgaaaacaaactaggaatcatattttaacagtttaactcaaagt
acagttaagcagctttagatgagttagcacaacactatttctcttgtcaa
actcagttgagagcatgagaccaagaatcggtctgaatggtaaatgacat
taggatgtagacttagcatctataatttctgttactcttcaagctgaaga
gagtactctgtaatcagtgaggaaactgctgcatcacatctacactactg
acactttgagcatggatgctaattgacgtgat
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtcagaatggctaagagcaaaaagtcaggtgacagc
aattgctggcgaggatgtggagaaaggggaacactcctccattgttgttg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccagtaagaaggacacatgctccactat
gttcatagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatgcagaaaatgtggtacatttacacaatg
gaatactactctgatattaaaaaaatgaatttatgaaattcctaggcaaa
tggatggacctggagggtatcatcctgagtgaggtaacccaatcacaaag
gaactcgcacaatatgtactcactgataagtggatattatcccagaaact
taggatacccaagatataagatacaacttgccaaacgcatgaaattcaag
aagaacgaagaccaaagtgtggacactttaccctttcttagatttgggaa
caaaacacccatggaaggagttacagagacaaaatttggagctgtgatga
aaggatggaccatctagtgattgccatatgcagggatccatctcataatc
agcttccaaatgctgacaccattgcatacactagcaagattttgctgaaa
ggacccagatatagctctctcttgtgagactatgctggggcctagcaaac
acagaagtggatgatcacagtcagtaattgtatgggtcacacggccctta
ttgagaactagagaattacccaaggagctaatgggactgcactcttatag
ttggacacatatgactagcgtacctcgaatctcgtctctagctgcatatg
tatcaagatggcctagtgcatcattgcaagagagccatggtactgcaact
tatatgcccagaacggtacgctgaactaaatgtggagatgtgtgtgggat
agtgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_61666950_61668036
seq2: B6Ng01-032G06.b_43_1120

seq1  GGAATTCCTGGCTTGAATATGAACCGGTGGAAATAGGCAGACATATGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCCTGGCTTGAATATGAACCGGTGGAAATAGGCAGACATATGAGA  50

seq1  ATGCTCAATGGAACTCAAAGGTAGGATATGCTACTCATAAAATCCAGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCAATGGAACTCAAAGGTAGGATATGCTACTCATAAAATCCAGTGC  100

seq1  AGATACTCTAGGGAATACAATGGTTTTTACATCTATTTACCTGTCTGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACTCTAGGGAATACAATGGTTTTTACATCTATTTACCTGTCTGATG  150

seq1  TTTTATCTTATAAAATTGGTTTCCAGATTACAGTAGAGTAGTATATGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCTTATAAAATTGGTTTCCAGATTACAGTAGAGTAGTATATGGAA  200

seq1  TTAAATTAGTGAAGGAGGGAAATATTACATAACTAAAGGATCCTTGGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTAGTGAAGGAGGGAAATATTACATAACTAAAGGATCCTTGGTGC  250

seq1  AGGAAGGATTTTTGACTTTGCTTTCTACACTGTTTCTGGGTGAGAATGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGATTTTTGACTTTGCTTTCTACACTGTTTCTGGGTGAGAATGTC  300

seq1  ACACAGTATTGTTAGATTTTTCCAGTGACTGAAACCTTTCAGTGAGGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTATTGTTAGATTTTTCCAGTGACTGAAACCTTTCAGTGAGGCAT  350

seq1  TGGATTTGTTTGTGAGTTGTCAGGGCACTAAGGAACATTTGATCTTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTGTTTGTGAGTTGTCAGGGCACTAAGGAACATTTGATCTTTTGT  400

seq1  GGAATACTTCACTTTAGCAGGATCTTCCTCAGTTATTCAAAACAGTAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATACTTCACTTTAGCAGGATCTTCCTCAGTTATTCAAAACAGTAACA  450

seq1  TCTTTTTCACTCTGTTATCAAAGTAACACATCATATGTGATAGTCTCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTCACTCTGTTATCAAAGTAACACATCATATGTGATAGTCTCAGT  500

seq1  TCTATTTCCAAGTTAAATGTCCTATCATATGAAAACTTTCCCTCCATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTCCAAGTTAAATGTCCTATCATATGAAAACTTTCCCTCCATGTT  550

seq1  CAGAAGTCTGTTTTGACAGTCTTCATTGGACATAAGAAACATAATTGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTCTGTTTTGACAGTCTTCATTGGACATAAGAAACATAATTGCAA  600

seq1  GAAGCAGTGAGAAATAGAGGCCAAATTGGCTACTTTAGGGTCTCTGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGTGAGAAATAGAGGCCAAATTGGCTACTTTAGGGTCTCTGAAAG  650

seq1  TTTGTCAAATGTTTCACATAAACTCTGTACAATGCTGTTAATTTTCAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCAAATGTTTCACATAAACTCTGTACAATGCTGTTAATTTTCAGAA  700

seq1  ACAGCCTTTGTATATTCAAAAAATTTTCATGAAAGGTAAAAGCTATATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTTTGTATATTCAAAAAATTTTCATGAAAGGTAAAAGCTATATGA  750

seq1  GAATATTGGTTGAATGGGAACTATTCTGTACTTGGTTAACTGAACACACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTGGTTGAATGGGAACTATTCTGTACTTGGTTAACTGAACACACA  800

seq1  ATTTTACTGAAAACAAACTAGGAATCATATTTTAACAGTTTAACTCAAAG  850
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTGAAAACAAACTAGGAATCATATTTTAACAGTTTAACTCAAAG  850

seq1  TACAGTTAAGCAGCTTTAGATGAGTTAGCACAACACTATTTCTCTTGTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTAAGCAGCTTTAGATGAGTTAGCACAACACTATTTCTCTTGTCA  900

seq1  AACTCAGTTGAGAGCATGAGACCAAGAATCGGTCTGAATGGTAAATGACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGTTGAGAGCATGAGACCAAGAATCGGTCTGAATGGTAAATGACA  950

seq1  TTAAGAATGTAGACCTAGCACCTATATTTTCTGTTACTCTTCAAAGCTGA  1000
      || || |||||||| ||||| ||||| ||||||||||||||| |||||||
seq2  TT-AGGATGTAGACTTAGCATCTATAATTTCTGTTACTCTTC-AAGCTGA  998

seq1  AGAGAAGTACTCTGTAATCAGTGAAGAAAACTGCTGCATCACATCTACCA  1050
      |||| |||||||||||||||||| || |||||||||||||||||||||  
seq2  AGAG-AGTACTCTGTAATCAGTG-AGGAAACTGCTGCATCACATCTAC--  1044

seq1  CCTACTGAACACTTTTGAGCATTGGATGCTAATTGAC  1087
       |||||| |||| |||||||| |||||||||||||||
seq2  ACTACTG-ACAC-TTTGAGCA-TGGATGCTAATTGAC  1078