BAC Information

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BAC

Clone NameB6Ng01-036B15
Chromosome3 (Build37)
Map Location 41,058,856 - 41,059,397
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036B15.bB6Ng01-036B15.g
ACCDH864387DH864388
length1,191810
definitionDH864387|Mus musculus domesticus DNA, BAC clone: B6Ng01-036B15, 5' end.DH864388|Mus musculus domesticus DNA, BAC clone: B6Ng01-036B15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactcctagtcactcccattctcggggtgtaatagtggggtgatg
ggcaagcaacgaattgggagctgtcacgccatatcaggtgctgaaacgtc
acgctgcgggttataaaagcagtgccattttcccggtttgggatcttact
gagaagcaagcaataaagctcttgccgcggaagattctggtttgttgcgt
ctttcttgccggtcgagcgggacgcaataggtttggtctcagctgtttct
tgggctaaacagcctatggcctcctctgggataagacttcacagagctga
gagtgacatgcctacccatttcaattaatgtctagacttcaacccttata
gtctcatgaccacagaaaatgggacagactttgctattttgttgtatttc
ttcacaaacaaacaaatgcttctccctgaagcctgattacatgtctttat
ggtaaactccagataaatgcatgctctagattagtgtgtttatgtgtatg
cttctgatagatatacagcccatcctttcatccagatgagcagttctctg
tagatttctttttctatttattagatattttcttcatttacatttcaaat
gctataccctttcctagtttcctctctgaaaatcccctatacactccctc
tacctcctgctccccaactcacccagtcccttaagtcttagttctgaact
ttgtctctgtaaatcctttcatgggtattttgtccccccttgtagtggct
attcctggttgtcaacttgactatatctacatgaattacagtccagaatt
ggaaggctcaccagtgaccctaatctggaggctgtgagatagaagtttct
gatctggatcttggtatggagatcttgaggcatagttgatatggattccc
gagattagatagggagatctttgagtcagtcagtgcacacacatttatct
ggctacactactgagacatatacgcattgagagagccttctctctctctc
tatgctgctgcatgtggactgagcactgctagatctgacttcattcagct
acatctgacattgtgactgactgcaacgtagtgtcatttcttcatagaga
tctaagtctatgatctagactgcatgaccccttagcagtccaatgtctct
tctagtcagtttgcaatgcatactgcagctgcgaggcgtcg
gaattccttgatccatttagatttgaccttagtacaaggagataggaatg
gatcaattcgcattcttctacatattaactgccagttgtgccagcacaat
ttgttgaaaatgctatcttttttccaagggatggttttagctcccttgtc
aaagatcaagtgaccataggtgtgtgggttcatttctgggtcttcaattc
taatccactggtctacgtgtctgtcactataacagtaccatgcagttttt
atcacaattgctctgtagtaaagctttaggtcaggcatggtgattccacc
agagggtcttttatccttgagaagagtttttgctatcctaggttttttgt
tattccagatgaatttgcagatttctctttctaattcgttgaagaattga
gttggaattttgatggggattgcattgaatctgtagattgcttttggcaa
gatggccatttttacaatgttgatcctgccaatccatgagcatgggagat
ctttccgtcttctgagatcgtctttaatttctttcttcagagacttgaag
ctctttccatacagatctttcacttccttagttagagtcatgccaagata
tttaatattatttgtgactattgagaacgggtgttgtatccctaatttct
ttctcagcctgtttattctttgtgtagagaaaggcaactgacttgtttga
gttaattttatatccagccacttcaccgaagctgtttatcaagtttagga
gttttctggtgggatttttagggtcacttatatatactatcatattatct
gcaaatagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41058856_41059397
seq2: B6Ng01-036B15.g_70_611 (reverse)

seq1  AGTCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAGATCTC  50
      ||||||||||||||||||||||||| |||||||||||| |||||||||||
seq2  AGTCTCTGAAGAAAGAAATTAAAGACGATCTCAGAAGACGGAAAGATCTC  50

seq1  CCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCC  100
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGGCCATCTTGCC  100

seq1  AAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAAT  150

seq1  TCTTCAACGAATTTGAAAGAGCAATCTGCAAATTCATCTGGAATAACAAA  200
      ||||||||||||| ||||||| ||||||||||||||||||||||||||||
seq2  TCTTCAACGAATTAGAAAGAGAAATCTGCAAATTCATCTGGAATAACAAA  200

seq1  AAACCTAGGATAGCAAAAACTCTTCTCAAGGATAACAGAACCTCTGGTGG  250
      ||||||||||||||||||||||||||||||||||| ||| ||||||||||
seq2  AAACCTAGGATAGCAAAAACTCTTCTCAAGGATAAAAGACCCTCTGGTGG  250

seq1  AATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAA  300

seq1  CTGCATGGTACTGGTATAGTGACAGACAAGCAGACCAATGGAATAGAATT  350
      ||||||||||||| |||||||||||||| | |||||| |||| |||||||
seq2  CTGCATGGTACTGTTATAGTGACAGACACGTAGACCAGTGGATTAGAATT  350

seq1  GAAGACTCAGAAACGAATCCACACACCTATGGTCACTTGATCTTCGACAA  400
      |||||| |||||| ||| |||||||||||||||||||||||||| |||||
seq2  GAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTTGACAA  400

seq1  GGGAGCTAAAACCATCCAGTGGAAAAAAGACAGCATTTTCAACAAATGGT  450
      |||||||||||||||||  ||||||||||| |||||||||||||||| ||
seq2  GGGAGCTAAAACCATCCCTTGGAAAAAAGATAGCATTTTCAACAAATTGT  450

seq1  GCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATTGATCCACTC  500
      ||||||||||||||  ||||  ||||||||||||||||||||||||| ||
seq2  GCTGGCACAACTGGCAGTTAATATGTAGAAGAATGCGAATTGATCCATTC  500

seq1  CTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAA  542
      ||||||||||||||||||||||||||||| ||||||||||||
seq2  CTATCTCCTTGTACTAAGGTCAAATCTAAATGGATCAAGGAA  542