BAC Information

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BAC

Clone NameB6Ng01-036H21
Chromosome3 (Build37)
Map Location 41,059,311 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036H21.bB6Ng01-036H21.g
ACCDH864650DH864651
length951491
definitionDH864650|Mus musculus domesticus DNA, BAC clone: B6Ng01-036H21, 5' end.DH864651|Mus musculus domesticus DNA, BAC clone: B6Ng01-036H21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttatggagtccaccttcttgagttctttatatatattggatattagtccc
ctatccgatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttggagaagctttgcaatttta
tgaggtcccatttattgattcttgatcttacagcacaagccactgctgtt
ctattcaggaatttttcccctgtacccatatcttcgaggcttttccctac
tttctcctctataagtttcagtgtcactggttttatgtggagttccttaa
tccacttagatttgaccttagtacaaggagaaagtaatggatcaatttgt
aatcttctacatgacaaccgccagttgtgtctaaggcatattgttaatga
tggatggggaggaccaatctcatcttgggttgggccactcctgtgcttgt
gatccttttctattaagaaagcagactgagtaagccatgagggaaaaagc
cagcaagcggcattgctcggtgtgctctgcatcagctcctgcagccaatt
tgagaccatttggatttcctgtcctgctttccttcattaatgtactatga
tgaggaagtatatcccaaataaagccttttgtcccctgcttacttttggc
catagtgtttctttgcaacaagaaattcaactaaggcaaagtcatttgag
gcttttctttgagccgattttgagtgcatgtctattgttaggaacactct
gagtcatgagggcacatacaaataaaattcagccatgtccattgcctcac
aacaacaatgctaccgggatgaatgttgagcagagatttctagagttgga
tataaactaagtagcaatgagaagactgttctcatcaaattaaccaaact
g

tctgctctaaatatagagagaaagtgtagagcagagactgaaggaaaggc
catatagaggctgtcccacctggggattcatcccatatacagttgccaaa
cccaaacactattgtggatgccaagaagtgcatgctgaagggagcctgat
atcgctgtctcctgagataccctgccagaggccttacaaatacagaggca
aatgttcacagcaaaccattggactgagcaccaggtccccagtggaggag
ttaaaggaccaaaggaggtgaaggggtttgcaatcccatagaaagagcaa
cagtatcaaccaaccagatcccccagagctcctaggggctaagccatcaa
ccaaggagtacaatgctccagctgtatatgtagcaaagaatggtcttgtc
aggcatgaatggaaggagaggtctttggtcctatgaagcctccatatgcc
ccagtgtaagggaattgagggctggaggtgggagtgggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059311_41059737
seq2: B6Ng01-036H21.b_45_472 (reverse)

seq1  CACAACTGGTTGTTATCATGTAGAAGAATGCGAATTGATCCACTCCTATC  50
      |||||||||  ||| |||||||||||| | | |||||||||| | || ||
seq2  CACAACTGGCGGTTGTCATGTAGAAGATTACAAATTGATCCATTACTTTC  50

seq1  TCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACGCCACATAAAAC  100
      |||||||||||||||||||||||||||||| ||||||| |||||||||||
seq2  TCCTTGTACTAAGGTCAAATCTAAGTGGATTAAGGAACTCCACATAAAAC  100

seq1  CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGAT  150
      ||| ||||||||||||||||||||||||||| ||||||||||| ||||||
seq2  CAGTGACACTGAAACTTATAGAGGAGAAAGTAGGGAAAAGCCTCGAAGAT  150

seq1  ATGGTCACAGGGGAAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGT  200
      ||||  |||||||||||||||||| ||||||||||| |||||||||||||
seq2  ATGGGTACAGGGGAAAAATTCCTGAATAGAACAGCAGTGGCTTGTGCTGT  200

seq1  AAGATTGAGAATAGACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCA  250
      |||||  |||||  | |||||||||||||| ||| |||||||||||| ||
seq2  AAGATCAAGAATCAATAAATGGGACCTCATAAAATTGCAAAGCTTCTCCA  250

seq1  AGGCAAAAGACACCGTCAATAAGACAAAAAGG-CACCAACAGATTGGGAA  299
      | |||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAGCAAAAGACACCGTCAATAAGACAAAAAGGCCACCAACAGATTGGGAA  300

seq1  AGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAATATATA  349
      ||||||||||||||||| ||||| ||||||||||||||||||||||||||
seq2  AGGATCTTTACCTATCCCAAATCGGATAGGGGACTAATATCCAATATATA  350

seq1  TCAAGAACTCAAGAAGGTGGATTCCAGAAAATCAAATAACCCCATTAAAA  399
      | ||||||||||||||||||| |||| |||||||||||||||||||||||
seq2  TAAAGAACTCAAGAAGGTGGACTCCATAAAATCAAATAACCCCATTAAAA  400

seq1  AATGGGGCTCAGAGCTAAACAAAGAATT  427
      |||||||||||||||| |||||||||||
seq2  AATGGGGCTCAGAGCTGAACAAAGAATT  428


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