BAC Information

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BAC

Clone NameB6Ng01-040P05
Chromosome3 (Build37)
Map Location 64,805,912 - 64,807,034
singlet/doubletsinglet
Overlap genenone
Upstream geneGmps, LOC670032, EG56544, 4930518C23Rik, LOC380739, EG637004, EG667031, EG637053, LOC672951, EG639869, EG667060, EG667069, LOC100040918, 4933425M15Rik, LOC670110
Downstream geneKcnab1, Ssr3, EG433604, EG667093, LOC100041083, 4931440P22Rik, Tiparp, LOC545530, LOC100040978, EG624866, Ccnl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-040P05.bB6Ng01-040P05.g
ACCDH867761DH867762
length9991,104
definitionDH867761|Mus musculus domesticus DNA, BAC clone: B6Ng01-040P05, 5' end.DH867762|Mus musculus domesticus DNA, BAC clone: B6Ng01-040P05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatatctggtactgttaatatagttaaaactcatgattaaggagc
tcatagaccctagggaggaatctactgtcattgttttgtgaaatagtcat
gtcatcaaacttccttctaaataactgtgcttatacctacagatgggggt
gtctctcaactttggccatagatttctttttgcagtgggcaacagtaaag
gcaaagatgaataacttctcaaaagttgagaataagagactgagatattt
gtatgagtctaactcctaccaagacccaggggccatcatggaagagtggg
tggaaagattataagaacagggtgatggtgaaggtgctgtgaaaggccat
cttccagacatgacatggctgtggcacacatgcactaactccaggagtgg
gtccctcacaagacatacacatgatcgagccagttaaaaattccaccctg
gatggaagatggtctaccaaggtcacatctgtagctaaggagctattagc
atatgatgaatacttgggcagtgggtgtcaattttctttggatagtagcc
actggaaggttgcctattccctgctggaagaccctccacccatgtgtaca
tggaaaacactaactggatttatttgattaaaattaatgaaaatttaaaa
gattttaaagaatgccataaacttggggagttctgggaataactggaagg
gataagttgggattcaaccaagattcattgaatacctgtgtgaaatctca
aaaagcaaaaaaaaaaaaatgtttaaaacatttctgtacattctcttgaa
atctcgccccttgcctgaccttcttctgcactatttgtcttcatgacaag
tgacgccccctgatatgctaagcacttatctgtttggtttctttctccct
attctaattctaagcttcaaaggcaaaggctctgtttttcttcatgtcct
tatcatcagtacccagacagtacctggcaagagctggtgcccaggagtg
gaattctttaaagaatttccttgaggaaaattggtctagcaagaaagaaa
aagatttgtgtttttcatttagcagcaattttattttaagaaaaatttac
atcactaggactaataaagggcaagaatgtgaaatatgccccaccaaaga
cagttcttcatgtctgcataacatttgccactaataaaccaacaaaggag
aactgagtgtgcatctgttctagtgctctgagagtctatttcaagggctc
tccattttccctatacctacagaaagctgaaaatgtgtttttaaattgat
gatcaaatgcccaacataatactagattctaatttgtaaaccatagacca
ggatctctataaatcctcaatgtgacatggaatttctgtgatggagaatg
catctgaaaatgtatatttttggcaaggagagcttttataagtcattttc
tcactttccaaacatatttaacttggatatagtgagctagatgttctatt
tcttggcaatgctcattacaacatagttttatacaccagcactgccacca
ctaccaccaccaccaccaccaccaccaccaacaacaacaacaacaacaac
aacaacaacaacaacaaaaggaagctaaggaaagaaagatctatgacctg
tgaacaaggtaaatgtgattcccagtatattcatatacagcctagtgaat
ttcctggaatctgaattcatcagaagctatgaatattatgacaaacactc
taattccctctagtggagaatgacagaagcattattcatcatagttctgt
tacttaattctaatacatcctcttttttggtttggttttggtttttcaag
acaagggctctctgtgtagccctggctgttctggaactcaattggtagac
caggatagccttgaaatcagagaactccatgcctctcttccaaatgctgg
gattaaagtgtgtaccactatgcctagagacaatacaatttcctaaatgg
gattgaggacacctattgttgtcacttatttgaggtctgtgatcaatagg
agtgtgctaggtacccattctagagcacctggggaccgttttgtgcatct
agaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_64805912_64807034
seq2: B6Ng01-040P05.g_70_1173

seq1  GAATTCTTTAAAGAATTTCCTTGAGGAAAATTGGTCTAGCAAGAAAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAAGAATTTCCTTGAGGAAAATTGGTCTAGCAAGAAAGAAA  50

seq1  AAGATTTGTGTTTTTCATTTAGCAGCAATTTTATTTTAAGAAAAATTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTGTGTTTTTCATTTAGCAGCAATTTTATTTTAAGAAAAATTTAC  100

seq1  ATCACTAGGACTAATAAAGGGCAAGAATGTGAAATATGCCCCACCAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTAGGACTAATAAAGGGCAAGAATGTGAAATATGCCCCACCAAAGA  150

seq1  CAGTTCTTCATGTCTGCATAACATTTGCCACTAATAAACCAACAAAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTTCATGTCTGCATAACATTTGCCACTAATAAACCAACAAAGGAG  200

seq1  AACTGAGTGTGCATCTGTTCTAGTGCTCTGAGAGTCTATTTCAAGGGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGTGTGCATCTGTTCTAGTGCTCTGAGAGTCTATTTCAAGGGCTC  250

seq1  TCCATTTTCCCTATACCTACAGAAAGCTGAAAATGTGTTTTTAAATTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTTCCCTATACCTACAGAAAGCTGAAAATGTGTTTTTAAATTGAT  300

seq1  GATCAAATGCCCAACATAATACTAGATTCTAATTTGTAAACCATAGACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAATGCCCAACATAATACTAGATTCTAATTTGTAAACCATAGACCA  350

seq1  GGATCTCTATAAATCCTCAATGTGACATGGAATTTCTGTGATGGAGAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTCTATAAATCCTCAATGTGACATGGAATTTCTGTGATGGAGAATG  400

seq1  CATCTGAAAATGTATATTTTTGGCAAGGAGAGCTTTTATAAGTCATTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGAAAATGTATATTTTTGGCAAGGAGAGCTTTTATAAGTCATTTTC  450

seq1  TCACTTTCCAAACATATTTAACTTGGATATAGTGAGCTAGATGTTCTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTCCAAACATATTTAACTTGGATATAGTGAGCTAGATGTTCTATT  500

seq1  TCTTGGCAATGCTCATTACAACATAGTTTTATACACCAGCACTGCCACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGCAATGCTCATTACAACATAGTTTTATACACCAGCACTGCCACCA  550

seq1  CTACCACCACCACCACCACCACCACCACCAACAACAACAACAACAACAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCACCACCACCACCACCACCACCACCAACAACAACAACAACAACAAC  600

seq1  AACAACAACAACAACAAAAGGAAGCTAAGGAAAGAAAGATCTATGACCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAACAACAACAAAAGGAAGCTAAGGAAAGAAAGATCTATGACCTG  650

seq1  TGAACAAGGTAAATGTGATTCCCAGTATATTCATATACAGCCTAGTGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAAGGTAAATGTGATTCCCAGTATATTCATATACAGCCTAGTGAAT  700

seq1  TTCCTGGAATCTGAATTCATCAGAAGCTATGAATATTATGACAAACACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGAATCTGAATTCATCAGAAGCTATGAATATTATGACAAACACTC  750

seq1  TAATTCCCTCTAGTGGAGAATGACAGAAGCATTATTCATCATAGTTCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCCCTCTAGTGGAGAATGACAGAAGCATTATTCATCATAGTTCTGT  800

seq1  TACTTAATTCTAATACATCCTCTTTTTTGGTTTTGGTTTTGGTTTTTCAA  850
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TACTTAATTCTAATACATCCTCTTTTTTGG-TTTGGTTTTGGTTTTTCAA  849

seq1  GACAAGGGCTCTCTGTGTAGCCCTGGCTGTTCTGGAACTCAATTGGTAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGGGCTCTCTGTGTAGCCCTGGCTGTTCTGGAACTCAATTGGTAGA  899

seq1  CCAGGATAGCCTTGAAATCAGAGAACTCCATGCCTCTCCTTCCAAATGCT  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCAGGATAGCCTTGAAATCAGAGAACTCCATGCCTCT-CTTCCAAATGCT  948

seq1  GGGATTAAAGGTGTGTACCACTATTGCCTAGGAGAACAAATACAATTTCC  1000
      ||||||||| ||||||||||||| |||||| ||||   ||||||||||||
seq2  GGGATTAAA-GTGTGTACCACTA-TGCCTA-GAGA--CAATACAATTTCC  993

seq1  TAAATGGGAATTGAGGACAACCTCATTGTTGGTCACTTATTTTGAGGTCT  1050
      |||||||| ||||||||| |||| |||||| |||||||| ||||||||||
seq2  TAAATGGG-ATTGAGGAC-ACCT-ATTGTT-GTCACTTA-TTTGAGGTCT  1038

seq1  GTGATCAATAGGAAGTGGTTGCTAAAGTAACCAATTCTAGAGCACCT-GG  1099
      |||||||||||| ||||  ||||  ||  ||| |||||||||||||| ||
seq2  GTGATCAATAGG-AGTG--TGCT--AGGTACCCATTCTAGAGCACCTGGG  1083

seq1  GACAGTTTTTGTGGCATCATAGAA  1123
      ||| | |||||| ||||| |||||
seq2  GACCG-TTTTGT-GCATC-TAGAA  1104