BAC Information

Click to search

BAC

Clone NameB6Ng01-044P23
Chromosome3 (Build37)
Map Location 10,286,157 - 10,286,721
singlet/doubletsinglet
Overlap gene1700008G05Rik
Upstream geneZfp704, Pag1, LOC621504, Fabp5, LOC100041480, Pmp2, Fabp9, Fabp4
Downstream geneImpa1, Slc10a5, Zfand1, Chmp4c, Snx16, LOC670564, LOC383826, EG667978
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044P23.bB6Ng01-044P23.g
ACCDH870586DH870587
length6541,197
definitionDH870586|Mus musculus domesticus DNA, BAC clone: B6Ng01-044P23, 5' end.DH870587|Mus musculus domesticus DNA, BAC clone: B6Ng01-044P23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttcttcccaccccaacccccaccccaagtttcttgcctggaaa
ttctaaaagttctgcctctttcactctgcccagccactggacattgctct
ttattgattaatcaaaaatcagttggggacacggaccctcagcatctgca
catgaaaattcccatgtcatttgaggaggtaaattaagataaagttttac
aaccagtgccctggttttgggttctataagaaagagcactgagcacgcta
gtaagcagcacctttccatggcctctgcatcagctcctgcctccaggcca
ggttcctgttaagttcctgccctgatttcctttgatgaagtgcaagacta
ataaaacttctctccagcttccttattggccatagtgtctcatcgcagca
atagaaaccctaactaagacacatagacagatgtctaactaagacacaaa
atacagaaaaaaattcttttaaggtaaagagtaatagaagagccacattt
taactatagaatatgatgttgctctagttggtactaattggcagtatcaa
gtgtgataacacatgtgtgtgacccaagcactttggagagcagagcacaa
gggacaagggtcatgaatgtgaggtcagactgagtgacatggtgatgaga
gaga
gaattcactaaataatatgcacggggatataattcccccttctttgtctt
ttaagaagttaaagttttaaacttccacaatatcctgtcctttacaatta
ataacttgttgacaaaacatctcaaatacttgactgttatagtcagtatt
catgtaacatgggcagtgactaattgcactttcaattgtttctcttaagg
agcggttgtaactaaaaagcttgaaaggttattaatagtcacatgtgcat
aatttatttatttattaaaagaaataagagtatttaattacagcaattta
ttaagtattattaagtcctcaagaattaacactattatgtgggaacaagt
agtaactgaggacactaatagcaaagaaattgacatatacaatttccaag
aatattaaaatattatcttaaatcataactgttttgaatatataaagaac
gagattatatatccaatctatcttatatataggacctatagattgcctga
gatataaatctagcatggcattgctttaagatgatcaggcaatccataac
aatttattaaatgtctaaaaaccaccttcttaaaaggacagcactttttc
tatgagttgtatatgcataagcaattgcaaatttgagaattaatagcatc
tgaaggatgaacaatcttaagcaattgtgagctctgagatataatattga
ctattaatatacaaattaaggtttgattgttcagcattttaaaataccat
ccacagtgagcacacaacttaattttctgtgctgaaacaggggaaactca
aaagaataagtgtgtgatctaattcacatgtacttacttcccatagaggg
gttgtttttagacacaataattggtatgtatgcatgcatgaatttataga
agatacagaagcatgcataaaacaatttttaacttatctttgggatattg
attgtcatcttatttaaaatgatggtatgtatagatcatattaatatctg
taataccaaattaaatgttgattggagcagacagacattcttgtcagtct
taagaacacatttgtttttggtttccaaaaatacgaattattcttacatt
ctttatagcacacaagtagtttaatactctggaacctgtctgtaggtgag
gctatctgccaccattgcttgatacgccttaaggatcttggctctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_10286157_10286721
seq2: B6Ng01-044P23.b_135_699 (reverse)

seq1  TCTCTCTCATCACCATGTCACTCAGTCTGACCTCACATTCATGACCCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCATCACCATGTCACTCAGTCTGACCTCACATTCATGACCCTTG  50

seq1  TCCCTTGTGCTCTGCTCTCCAAAGTGCTTGGGTCACACACATGTGTTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTGTGCTCTGCTCTCCAAAGTGCTTGGGTCACACACATGTGTTATC  100

seq1  ACACTTGATACTGCCAATTAGTACCAACTAGAGCAACATCATATTCTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTGATACTGCCAATTAGTACCAACTAGAGCAACATCATATTCTATA  150

seq1  GTTAAAATGTGGCTCTTCTATTACTCTTTACCTTAAAAGAATTTTTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAATGTGGCTCTTCTATTACTCTTTACCTTAAAAGAATTTTTTTCT  200

seq1  GTATTTTGTGTCTTAGTTAGACATCTGTCTATGTGTCTTAGTTAGGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTGTGTCTTAGTTAGACATCTGTCTATGTGTCTTAGTTAGGGTTT  250

seq1  CTATTGCTGCGATGAGACACTATGGCCAATAAGGAAGCTGGAGAGAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGCTGCGATGAGACACTATGGCCAATAAGGAAGCTGGAGAGAAGTT  300

seq1  TTATTAGTCTTGCACTTCATCAAAGGAAATCAGGGCAGGAACTTAACAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGTCTTGCACTTCATCAAAGGAAATCAGGGCAGGAACTTAACAGG  350

seq1  AACCTGGCCTGGAGGCAGGAGCTGATGCAGAGGCCATGGAAAGGTGCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGCCTGGAGGCAGGAGCTGATGCAGAGGCCATGGAAAGGTGCTGC  400

seq1  TTACTAGCGTGCTCAGTGCTCTTTCTTATAGAACCCAAAACCAGGGCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAGCGTGCTCAGTGCTCTTTCTTATAGAACCCAAAACCAGGGCACT  450

seq1  GGTTGTAAAACTTTATCTTAATTTACCTCCTCAAATGACATGGGAATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTAAAACTTTATCTTAATTTACCTCCTCAAATGACATGGGAATTTT  500

seq1  CATGTGCAGATGCTGAGGGTCCGTGTCCCCAACTGATTTTTGATTAATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCAGATGCTGAGGGTCCGTGTCCCCAACTGATTTTTGATTAATCA  550

seq1  ATAAAGAGCAATGTC  565
      |||||||||||||||
seq2  ATAAAGAGCAATGTC  565