BAC Information

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BAC

Clone NameB6Ng01-045H09
Chromosome3 (Build37)
Map Location 41,059,201 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045H09.bB6Ng01-045H09.g
ACCDH870911DH870912
length9111,016
definitionDH870911|Mus musculus domesticus DNA, BAC clone: B6Ng01-045H09, 5' end.DH870912|Mus musculus domesticus DNA, BAC clone: B6Ng01-045H09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgttt
ttctggagtccaccttcttgacatatttatatatattggatattagtccc
ctatctgatataggatagataaacatcctttcccaatctgttggtgtcct
ttttgtcttattgacggtgtcttttgccttgcagaagctttgcaatttta
tgaggtcccatttgttgattcttgatcttacagcacaagccattgctgtt
ctagtcaggaatttttcccctgtacccatatcttggagggttttccctac
tttctcctctataagtttcactgtctctggttttatgtggagttccttga
tccacttagatttgatcttagtacaaggagataggaatggatcaattcac
attcctctacatgataagagccagttgtgccagcaccatttgttgaaaat
gctggtttttttttttaaactggatggtttctgctcccttgacaaagatc
aagtgaccataggtgtgtgggttcatttctgtgtcttcaattctattcca
tttttctacttgtctgttgctataccagtaccatgcagtttttatcacaa
ttgctctgtagtacagctttaggtccagcatggtgattccaccaaaggtt
cttttatccttgagaagagtttttgctatcctaggttttttgttattcca
gatgaatttacagatttccctttctaattcgttgaagaattgagttggaa
ttttgatggggattgcactgaatctgtacattgctttcagcaagataacc
atttttactacattgatcctgccaatccatgagcatgggagatctttcca
tcttctgaggtcttctttaatttctttcttcagagacttgaagttctatc
atacgtatttt
gaattcattggcacaagagaaaaattatatatatatatatatatatatat
atatatatatatatatatatatatatatatattacagagcactaatagta
caagggctaagataaatagttaataaatagtaccttatgaaactgaaaag
cttctgtaaggcaaaggaaaccatcaatgggatagtggcagcctacagaa
tgggaaaacatgtttaaaaattgacatttaaaagaggtctaaaatctttg
acttataaggaaatcaaaaacatacctacacacacattacaatttaaaaa
tggcatacatatctaattagataaatctcaatataggtgtagagagaaca
tcttgtttattgtatggatgcatcacctgtcgatttaaaagcctatggac
tatggcttagggaacaaatagatagtgtacattgaaggagaaagcattct
ggaacaaatggaggtagggggaggattcaccaggaaattatcatgagtta
gacgcacagtacctgagcccaggtaaccagaagtgtggcagaatgtaggc
taaaataaatgggatattttaagtagtatgtagtcagagatgagcctagc
tatttggccaaggtattttgtaaatagattttaaatctgaaccttattgg
tggagtatggaactgaaaggaagaagcagggccaagggtcaacatagagg
aatctcacatggctgagaatacttaaagaaatgtccagtatccttacctt
tgaaaatgcaagtcaaaatcattgagattctttttttccaatttttatag
atattttcttcattacatttcaaatgctatcccgaaagtcacccataccc
cacaaccgctctcctacccacccactcccacttctggccctggttttgcc
tgtactgggcatataaagttgggagaccacggtctcttctcccaatgatg
gccgactagctatcttctgcaatatgcagctagaacatgagctctggggg
tactgttagtaatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059201_41059737
seq2: B6Ng01-045H09.b_43_584 (reverse)

seq1  GAATTGAAGACTCAGAAACGAATCCACACACCTATGGTCACTTGATCTTC  50
      ||||||||||| |||||| ||| |||||||||||||||||||||||||| 
seq2  GAATTGAAGACACAGAAATGAACCCACACACCTATGGTCACTTGATCTTT  50

seq1  GACAAGGGAGCTAAAACCATCCAGTGGAAAAAAGA----CAGCATTTTCA  96
      | |||||||||  ||||||||||||  |||||| |    |||||||||||
seq2  GTCAAGGGAGCAGAAACCATCCAGTTTAAAAAAAAAAACCAGCATTTTCA  100

seq1  ACAAATGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATT  146
      ||||||||||||||||||||||| | |||||||||||| ||||| |||||
seq2  ACAAATGGTGCTGGCACAACTGGCTCTTATCATGTAGAGGAATGTGAATT  150

seq1  GATCCACTCCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGA  196
      |||||| |||||||||||||||||||| ||||||||||||||||||||||
seq2  GATCCATTCCTATCTCCTTGTACTAAGATCAAATCTAAGTGGATCAAGGA  200

seq1  ACGCCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGA  246
      || ||||||||||||||||||| |||||||||||||||||||||| ||||
seq2  ACTCCACATAAAACCAGAGACAGTGAAACTTATAGAGGAGAAAGTAGGGA  250

seq1  AAAGCCTTGAAGATATGGTCACAGGGGAAAAATTCCTGCATAGAACAGCA  296
      ||| |||  |||||||||  ||||||||||||||||||  ||||||||||
seq2  AAACCCTCCAAGATATGGGTACAGGGGAAAAATTCCTGACTAGAACAGCA  300

seq1  ATGGCTTGTGCTGTAAGATTGAGAATAGACAAATGGGACCTCATGAAACT  346
      |||||||||||||||||||  |||||  |||||||||||||||| ||| |
seq2  ATGGCTTGTGCTGTAAGATCAAGAATCAACAAATGGGACCTCATAAAATT  350

seq1  GCAAAGCTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGG-CAC  395
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GCAAAGCTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGGACAC  400

seq1  CAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTA  445
      ||||||||||||||||||| |||| |||||||| ||||||||||||||||
seq2  CAACAGATTGGGAAAGGATGTTTATCTATCCTATATCAGATAGGGGACTA  450

seq1  ATATCCAATATATATCAAGAACTCAAGAAGGTGGATTCCAGAAAATCAAA  495
      ||||||||||||||| || |  ||||||||||||| ||||||||| ||||
seq2  ATATCCAATATATATAAATATGTCAAGAAGGTGGACTCCAGAAAAACAAA  500

seq1  TAACCCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAATT  537
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAATT  542