BAC Information

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BAC

Clone NameB6Ng01-045J14
Chromosome3 (Build37)
Map Location 28,964,306 - 29,062,660
singlet/doubletdoublet
Overlap gene6130401L20Rik
Upstream genePld1, Tnik, Slc2a2, EG624446, Eif5a2, Rpl22l1, Gm1527
Downstream geneLOC100040676, Evi1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045J14.bB6Ng01-045J14.g
ACCDH871007DH871008
length1,1341,011
definitionDH871007|Mus musculus domesticus DNA, BAC clone: B6Ng01-045J14, 5' end.DH871008|Mus musculus domesticus DNA, BAC clone: B6Ng01-045J14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,061,497 - 29,062,660)(28,964,306 - 28,965,345)
sequence
gaattcaggaaaagaagccttcacagcacccttagagttagccctcagca
cacccagatcatgcatcagcaactttttgctgactaccagaccagacctc
cattgccatcaatttctgtattctcagaagtctgttaaagtgctaataga
ttatcatgaagcaatcatggattctttgtttaaccttgcttaatgaaaca
atggaaataatctgattggaagaaaagaaaatgtgaattataaaaaccac
aatgagtatccaaaataacaaaggaaacctgttgtatagaaacttcctct
agaatgaaaaccctctatcttggatagaagctcattaagacgcaggatgc
tcacaggggtagcagattgaataatagaatgttctaagggagacagaaca
ttccaccttacaaggaagtttgctaaatacagaagtactcaaagtctcag
gaagtccctgaaactgacaaaaagcccttgtcctctcaagcacatataag
cctggactgctgagagacattcttgggacaagcaagctgcctataagaag
cagagggcagcctagatggcacctgaaagtggcagaaagcaacagaccta
ccaggagaggacattttctgatctgttgagctgcctgcaagttcattgtg
ttccaagttttcagcttccatgagccatcacccatgctggggaaagttat
tggtgatgcaactggttggaggatcattctgcttttggcaaaacccccaa
tacaactcactggtgttatctatccatacttctgtctgtctgtctgtctg
tctgtctgtcgtgcgtgggtgtgtcatgtttgctcacatttcaacctctc
gtctacatccccctcagtacacactgtagtaaaataaataagactgaaga
tatggctcagtggttaaagcaccaactactctttcagagtcctagaaacc
acatgttggctcacactatctgcaatggaactgttgcctcttctggtgta
tctgaagcagtgacagtatactcacatatataaaaataataagtttttat
attaataaataagaaagaaaagctgttaaaaatctaaacaaccacgaaat
gccacgaccctgtgctgcagcctaatagccaatt
gaattcattgataagtggttggagaatgctgatttttactttactttcgt
tgttagtgtaaggaggctgttggaaaggggtttgcgttgtgggagaaaat
tgtgagggcaagtgaagaactaaccttcccttagaggttaacactaacta
actaactaactaactaactaactacacacacacacacacacacacacaca
cacacacatatatatatatatatacatatatatatatatatatatacttt
aatatgtgtacataccatacatactacagatatatatctttatattacct
ctttatattttcaggttgcatgctctattagtcagggttctctagagtca
cagaccttatatggaatgtctctctatattaagggaatttattgtgatga
cttacagtctacagtccaactaacccaacaatgaacagccattaatggga
agtccaagcatgtagtattttcttcgtctccccaaggctaggtatttcgg
ctggctttctgtattagctggaaccctaaagaagtaagttccaacagatg
tgctggcaagtagcaagcaggtgaagaaaagcgagccttcctcttccatt
gtccttatgtaggtctcctgcagaatgtatggcccagattcaaggggtgc
accaccacgcctggatttggaacttgctctgtcccaggctgggcttgcat
gcagagatctgcttgcctgtctcctgggattaaagacctgtacttgcttg
ggcctatgctttccatggccactatgcctcagatctggatcaacagcatg
tattatcccatgtcagatccagatcagaagcctgtgtcttcagcttcaga
tctggagctcaagtttgccctcatttctgtatgtagtcatttcagatgtc
atcagatgtcaacgaatagctttcacacatacttaaatatgtacagtgag
ttgtttcttttaaaactttttattgatcttgggatcacattatgtaccat
ccctcattccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_29061497_29062660
seq2: B6Ng01-045J14.b_43_1176 (reverse)

seq1  AATTGGCATATTAGGCTTGCAGCACAGTGGGTCCTGTGTGCATTTTCTGT  50
      ||||||| |||||||| |||||||||  ||||| ||   ||||||     
seq2  AATTGGC-TATTAGGC-TGCAGCACA--GGGTCGTG---GCATTT----C  39

seq1  GTGTTTGTTTTAGATTTTTTTTACAGTTTTTTCTTTCTTATTTATTTAAT  100
      ||| ||| ||||||  ||||| ||||  ||||||||||||||||||    
seq2  GTGGTTG-TTTAGA--TTTTTAACAG-CTTTTCTTTCTTATTTATT----  81

seq1  TAATTAAAAAAACTTATTTATTTTATATATGTGAGTATACTGTCACTGCC  150
        | || |||||||||||  |||||||||||||||||||||||||||| |
seq2  --AATATAAAAACTTATTATTTTTATATATGTGAGTATACTGTCACTG-C  128

seq1  TTCAGATACACCAGAAGAGGGCAACAGTTCCCATTGCAGATAGTTGTGAG  200
      |||||||||||||||||| |||||||||| ||||||||||||| ||||||
seq2  TTCAGATACACCAGAAGA-GGCAACAGTT-CCATTGCAGATAG-TGTGAG  175

seq1  CCAACATGTGGTTTCTAGGACCTCTGAAAGAGTAGTTGGTGCTTTTAACC  250
      |||||||||||||||||||| ||||||||||||||||||||| |||||||
seq2  CCAACATGTGGTTTCTAGGA-CTCTGAAAGAGTAGTTGGTGC-TTTAACC  223

seq1  ACTGAGCCATATCTTCAGTCCTTATTTTATTTTACTACAGTGTGTACTTG  300
      ||||||||||||||||||| |||| |||||||||||||||||||||| ||
seq2  ACTGAGCCATATCTTCAGT-CTTA-TTTATTTTACTACAGTGTGTAC-TG  270

seq1  AGGGGGATGTAGACGAGAGGTTGAAATGTGAGCAAACATGACACACCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGATGTAGACGAGAGGTTGAAATGTGAGCAAACATGACACACCCAC  320

seq1  GCACGACAGACAGACAGACAGACAGACAGACAGAAGTATGGATAGATAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGACAGACAGACAGACAGACAGACAGACAGAAGTATGGATAGATAAC  370

seq1  ACCAGTGAGTTGTATTGGGGGTTTTGCCAAAAGCAGAATGATCCTCCAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTGAGTTGTATTGGGGGTTTTGCCAAAAGCAGAATGATCCTCCAAC  420

seq1  CAGTTGCATCACCAATAACTTTCCCCAGCATGGGTGATGGCTCATGGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGCATCACCAATAACTTTCCCCAGCATGGGTGATGGCTCATGGAAG  470

seq1  CTGAAAACTTGGAACACAATGAACTTGCAGGCAGCTCAACAGATCAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAACTTGGAACACAATGAACTTGCAGGCAGCTCAACAGATCAGAAA  520

seq1  ATGTCCTCTCCTGGTAGGTCTGTTGCTTTCTGCCACTTTCAGGTGCCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTCTCCTGGTAGGTCTGTTGCTTTCTGCCACTTTCAGGTGCCATC  570

seq1  TAGGCTGCCCTCTGCTTCTTATAGGCAGCTTGCTTGTCCCAAGAATGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTGCCCTCTGCTTCTTATAGGCAGCTTGCTTGTCCCAAGAATGTCT  620

seq1  CTCAGCAGTCCAGGCTTATATGTGCTTGAGAGGACAAGGGCTTTTTGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCAGTCCAGGCTTATATGTGCTTGAGAGGACAAGGGCTTTTTGTCA  670

seq1  GTTTCAGGGACTTCCTGAGACTTTGAGTACTTCTGTATTTAGCAAACTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGGGACTTCCTGAGACTTTGAGTACTTCTGTATTTAGCAAACTTC  720

seq1  CTTGTAAGGTGGAATGTTCTGTCTCCCTTAGAACATTCTATTATTCAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAAGGTGGAATGTTCTGTCTCCCTTAGAACATTCTATTATTCAATC  770

seq1  TGCTACCCCTGTGAGCATCCTGCGTCTTAATGAGCTTCTATCCAAGATAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACCCCTGTGAGCATCCTGCGTCTTAATGAGCTTCTATCCAAGATAG  820

seq1  AGGGTTTTCATTCTAGAGGAAGTTTCTATACAACAGGTTTCCTTTGTTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTTCATTCTAGAGGAAGTTTCTATACAACAGGTTTCCTTTGTTAT  870

seq1  TTTGGATACTCATTGTGGTTTTTATAATTCACATTTTCTTTTCTTCCAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGATACTCATTGTGGTTTTTATAATTCACATTTTCTTTTCTTCCAAT  920

seq1  CAGATTATTTCCATTGTTTCATTAAGCAAGGTTAAACAAAGAATCCATGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTATTTCCATTGTTTCATTAAGCAAGGTTAAACAAAGAATCCATGA  970

seq1  TTGCTTCATGATAATCTATTAGCACTTTAACAGACTTCTGAGAATACAGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCATGATAATCTATTAGCACTTTAACAGACTTCTGAGAATACAGA  1020

seq1  AATTGATGGCAATGGAGGTCTGGTCTGGTAGTCAGCAAAAAGTTGCTGAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATGGCAATGGAGGTCTGGTCTGGTAGTCAGCAAAAAGTTGCTGAT  1070

seq1  GCATGATCTGGGTGTGCTGAGGGCTAACTCTAAGGGTGCTGTGAAGGCTT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGATCTGGGTGTGCTGAGGGCTAACTCTAAGGGTGCTGTGAAGGCTT  1120

seq1  CTTTTCCTGAATTC  1164
      ||||||||||||||
seq2  CTTTTCCTGAATTC  1134

seq1: chr3_28964306_28965345
seq2: B6Ng01-045J14.g_66_1076

seq1  GAATTCATTGATAAGTGGTTGGAGAATGCTGATTTTTACTTTACTTTCGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGATAAGTGGTTGGAGAATGCTGATTTTTACTTTACTTTCGT  50

seq1  TGTTAGTGTAAGGAGGCTGTTGGAAAGGGGTTTGCGTTGTGGGAGAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGTGTAAGGAGGCTGTTGGAAAGGGGTTTGCGTTGTGGGAGAAAAT  100

seq1  TGTGAGGGCAAGTGAAGAACTAACCTTCCCTTAGAGGTTAACACTAACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGGCAAGTGAAGAACTAACCTTCCCTTAGAGGTTAACACTAACTA  150

seq1  ACTAACTAACTAACTAACTAACTACACACACACACACACACACACACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACTAACTAACTAACTAACTACACACACACACACACACACACACACA  200

seq1  CACACACATATATATATATATATACATATATATATATATATATATACTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACATATATATATATATATACATATATATATATATATATATACTTT  250

seq1  AATATGTGTACATACCATACATACTACAGATATATATCTTTATATTACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTGTACATACCATACATACTACAGATATATATCTTTATATTACCT  300

seq1  CTTTATATTTTCAGGTTGCATGCTCTATTAGTCAGGGTTCTCTAGAGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATATTTTCAGGTTGCATGCTCTATTAGTCAGGGTTCTCTAGAGTCA  350

seq1  CAGACCTTATATGGAATGTCTCTCTATATTAAGGGAATTTATTGTGATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCTTATATGGAATGTCTCTCTATATTAAGGGAATTTATTGTGATGA  400

seq1  CTTACAGTCTACAGTCCAACTAACCCAACAATGAACAGCCATTAATGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGTCTACAGTCCAACTAACCCAACAATGAACAGCCATTAATGGGA  450

seq1  AGTCCAAGCATGTAGTATTTTCTTCGTCTCCCCAAGGCTAGGTATTTCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAAGCATGTAGTATTTTCTTCGTCTCCCCAAGGCTAGGTATTTCGG  500

seq1  CTGGCTTTCTGTATTAGCTGGAACCCTAAAGAAGTAAGTTCCAACAGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTTCTGTATTAGCTGGAACCCTAAAGAAGTAAGTTCCAACAGATG  550

seq1  TGCTGGCAAGTAGCAAGCAGGTGAAGAAAAGCGAGCCTTCCTCTTCCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGCAAGTAGCAAGCAGGTGAAGAAAAGCGAGCCTTCCTCTTCCATT  600

seq1  GTCCTTATGTAGGTCTCCTGCAGAAGGTATGGCCCAGATTCAAGGGGTGC  650
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GTCCTTATGTAGGTCTCCTGCAGAATGTATGGCCCAGATTCAAGGGGTGC  650

seq1  ACCACCACGCCTGGATTTGGAACTTGCTCTGTCCCAGGCTGGCCTTGCAT  700
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACCACCACGCCTGGATTTGGAACTTGCTCTGTCCCAGGCTGGGCTTGCAT  700

seq1  GCAGAGATCTGCTTGCCTGTCTCCTGGGATTAAAGACCTGTACTTGCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGATCTGCTTGCCTGTCTCCTGGGATTAAAGACCTGTACTTGCTTG  750

seq1  GGCCTATGCTTTCCATGGCCACTATGCCTCAAGATCTGGATCAACAGCAT  800
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GGCCTATGCTTTCCATGGCCACTATGCCTC-AGATCTGGATCAACAGCAT  799

seq1  GTATTATCCCATGTCAAGATCCAGATCAGAAGCCTGTGTCTTCCAGCTTC  850
      ||||||||||||||| |||||||||||||||||||||||||| |||||||
seq2  GTATTATCCCATGTC-AGATCCAGATCAGAAGCCTGTGTCTT-CAGCTTC  847

seq1  AGGATCTGGAGCTCAAGTTTGCCCTCCATTTCTGTATTGTAGTTCATTTC  900
      | ||||||||||||||||||||||| |||||||||| ||||| |||||||
seq2  A-GATCTGGAGCTCAAGTTTGCCCT-CATTTCTGTA-TGTAG-TCATTTC  893

seq1  AGATGTCATCAGATTGTCAAACAGAAATAGCTTTCACACATACCTTAAAT  950
      ||||||||||||| |||||   |  ||||||||||||||||| |||||||
seq2  AGATGTCATCAGA-TGTCA---ACGAATAGCTTTCACACATA-CTTAAAT  938

seq1  ATGTACAGTGAAGTTTGTTTTCCTTTTTAAAAACCTTTTTATTGATTCTT  1000
      |||||||||||   ||||||  |||||   ||| ||||||||||||   |
seq2  ATGTACAGTGA--GTTGTTT--CTTTT---AAAACTTTTTATTGAT--CT  979

seq1  TGTGAATTTCACATTATGTACCCCAATCCCACTCATTCCC  1040
      || ||   ||||||||||||||   ||||  |||||||||
seq2  TGGGA---TCACATTATGTACC---ATCC--CTCATTCCC  1011