BAC Information

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BAC

Clone NameB6Ng01-048M16
Chromosome3 (Build37)
Map Location 81,879,619 - 81,879,972
singlet/doubletsinglet
Overlap genenone
Upstream genePdgfc, LOC229443, LOC100041901, Ctso, Tdo2, Accn5, Gucy1b3
Downstream geneGucy1a3, Mtap9, Npy2r, LOC100041940, EG633285, Lrat, Fgg, Fga, Fgb, Plrg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048M16.bB6Ng01-048M16.g
ACCDH873246DH873247
length333971
definitionDH873246|Mus musculus domesticus DNA, BAC clone: B6Ng01-048M16, 5' end.DH873247|Mus musculus domesticus DNA, BAC clone: B6Ng01-048M16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
cagaagttttagatttgtcttgtatttctgttttgtctgtttgtctgtct
gtccatcagtccacccacccacccacccatccatccatccatccatccat
ccatccaagggcccattacaaatgtgtgaacatttcatccctctccagta
tgtctttctccctccctccctccttccctccttccctttctccttccctc
tttctttctttctttctttctttctttctttctttctttctttctttctt
tctttctctcttccttccttcctccccctctctctctttctctcttcctt
cctctctctctctctctctctctctctctctct
gaattcagcattggtgctaaggcaacttcatttggatagttttagtagtt
cgtcattatacttttgttttattagaaaaatgttctcagaacaggacttt
ctctgaaagccaaagtttaggcctctacttgcacaacaaatgtgtacaaa
acccacctgtttctaggttactattcatctatctttcaagacaaacgatt
taaaaaataatcaaaacaaaataaaaaggtaggataacgttttcattttt
atggatatttttgtcttaatataaatggaacttttaattaatctgatctt
catttttattaattattgtatttatttacatttcaaatattatccctctt
cctggtctctgctctgcaaaagctcctcccatctcccctccctttggcct
ctaagagggtgctcccccacccacccacttcacccctctagcatccccct
tctctgtggcaacaagcgcctcccatgcaattgataccagataaggcagt
cttctgctacatacacagcaggagccatggatcaacccatgtatactctt
tggttggggatttagtccctgggaactctgaggggtccagttagttgatg
gttattcttcctatggggttgtaatgcccttttagcttcttctgtacttc
ccctaactcttccattggggtcctggcttagtccagtggttgactctgag
tatctgcaccttgcctaagtgttggcagagcctcctcagaggacatctat
accaggctcctgtctgcagctcttctagcatcagtaatacttgtcaggtt
gtttgagtaagggatggatcccagtgtctcagatggcctttcttcagtct
ggtgctccatcccccccccccccgtgttcctttacaagaacaattctggt
caaggttggaaagtaagtgtcccatccctcacctggcatctatttataag
gaagtctcttcagtggaaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_81879619_81879972
seq2: B6Ng01-048M16.b_45_383

seq1  GAATTCCAGAAGTTTTAGATTTGTCTTGTATTTCTGTTTTGTCTGTTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAAGTTTTAGATTTGTCTTGTATTTCTGTTTTGTCTGTTTGT  50

seq1  CTGTCTGTCCATCAGTCCACCCACCCACCCACCCATCCATCCATCCATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTCCATCAGTCCACCCACCCACCCACCCATCCATCCATCCATCC  100

seq1  ATCCATCCATCCAAGGGCCCATTACAAATGTGTGAACATTTCATCCCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCCATCCAAGGGCCCATTACAAATGTGTGAACATTTCATCCCTCT  150

seq1  CCAGTATGTCTTTCTCCCTCCCTCCCTCCTTCCCTCCTTCCCTTTCTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTATGTCTTTCTCCCTCCCTCCCTCCTTCCCTCCTTCCCTTTCTCCT  200

seq1  TCCC----TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  246
      ||||    ||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  250

seq1  TTTCTTTCTTTCTCTCTTCCTTCCTTCCTCCCCCTCTCTCTCTTTCTCTC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTCTCTTCCTTCCTTCCTCCCCCTCTCTCTCTTTCTCTC  300

seq1  TTCCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  346
      |||||||||||||||||||||||||||||||||||||||           
seq2  TTCCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT-----------  339

seq1  TCTCCTCT  354
              
seq2  --------  339