BAC Information

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BAC

Clone NameB6Ng01-051B07
Chromosome3 (Build37)
Map Location 63,013,933 - 63,150,373
singlet/doubletdoublet
Overlap geneMme
Upstream gene4631416L12Rik, Dhx36, Gpr149, LOC676984, LOC666967
Downstream genePlch1, LOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032, EG56544, 4930518C23Rik, LOC380739, EG637004, EG667031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051B07.bB6Ng01-051B07.g
ACCDH874830DH874831
length1,1451,146
definitionDH874830|Mus musculus domesticus DNA, BAC clone: B6Ng01-051B07, 5' end.DH874831|Mus musculus domesticus DNA, BAC clone: B6Ng01-051B07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,013,933 - 63,015,086)(63,149,213 - 63,150,373)
sequence
gaattcctttaactgtcttcagatcctcctcatccctgccatcctctcat
ctgagatattgtgagatgagaatggggtaccacgttccatctcatccttt
ctcttctctttcagttccctctttttttatttccctcattctgtatgaca
tcattaccttcccagatcccagacagcttatacaggtttccttacagcca
atacaaaagggccagtacaaagggaccatcacaaaatacatgactttgat
gaattggccattcaaagaacttcctgatctttcttttgttgttttgggtt
tgtaagttgtttaaatcaacactgcattgtttttcacacagttcttcagg
tcatgggatgctcttattcaataggtttcataacctgtgacaagagacac
ccaaaggcctctttactcagatgtctgctgtatgaatgagaaaatgggag
agagagggaaagagacatgctgggggcagatgtactatctttcttcctcc
tcatccttggtcacggtttcttcctcttctccctttattacttccccatc
attgagcttctccatatggctagcttgggtttcctcatacttcttgccac
ttcaggataatgaagcttcttacatggtcattgatgtcccaaggaaacgg
aaactttcaactttgcctgaatggaaaccggaagatgttccaaaattcaa
ctagaatgtaaatcatttgcatcctattgggtattctggtgcttgggact
aataaaagggcaattagacttcagtttcttttaattttctatttattcat
tcattcactcgttcattcattcactatatatccatatcacagtcacccct
tttcctggtaccccccttcacatcccttcctcccatccattctcttctaa
atgggtattgctgtaccctggcacatcaattcattgaaggaataggcaca
tcctctcccactgaggccagaaaagcagcccagttagggaaccaggatcc
acatacctgcaacagatttaggcagagcccctgctccagtttttggggac
tcacatgaagaccagttgccactctgcaaatatggtgtttgggagactag
tcagtcatgcttgccttggtgttggagttcagtccttgggacccc
gaattcactagctggctggctagtgagcttcaatgatatactcatctcta
ccttctcagcacttgaactcagatctgtcccaccgtgcctacttgttttt
attgtttttgttgttgttgttttgtttttaaacatgagtttagagattaa
actcaggttgaactcaggtcatgcttacaaggcaagcctttaccaactga
gcttttaggcaattttttattatattttttcctatatatttttgaagttg
acctttgcctatagattgatttgctccaatggctctgactggtctttacc
ttttcttcagctttcttttttgtctcagcatccatccaagtaaggtcatc
caaagtctgaataaaaacttcccggatttgtgcaatcaagtcttcaacct
caaaacaaaaggttattaatagtctaatatagtccatgagttctttcttc
attacaggttttaaaacgaaggtgcatgctgcccttgtagatgcaacagt
aagctaagaaatataaatttacagatgaattctgacctccctgcaaaatg
gatgtaaatgggcatataggatcagtgtgttttaaagcaatattgttgtt
atcaaaatttgtcagttaaatacatcgtattacatacagaaagccgaagt
tatcttcagaatgtcctagttcttgctgtccttttagaagaataccatat
tagctctcaatgtcaccattggttcaattaagcaagaagtagcatttcaa
taagttgttttactatgccattacactgcattgccttaatttcagtagca
attagaaaatagtatacctttctcacatttcaaataaactgtggcttaca
tttttggtacttaatgaaatggtcagttgggaaatagacaactttataag
tctaatacatgacagtgtacattaaagtcactgtttctggaaaatagaca
cgtgctttcaattaaacatcatgagcagaacacagctagacttctgtgga
aagcagaaacataactagacttttaagaagcccaagtgaaatctgttgag
aacatgggtacattatgatccccagattctgcttaattataaaattaagc
aaaaatgtacgactgtactgctatcaaccacatgaactgctagggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_63013933_63015086
seq2: B6Ng01-051B07.b_44_1188

seq1  GAATTCCTTTAACTGTCTTCAGATCCTCCTCATCCCTGCCATCCTCTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTAACTGTCTTCAGATCCTCCTCATCCCTGCCATCCTCTCAT  50

seq1  CTGAGATATTGTGAGATGAGAATGGGGTACCACGTTCCATCTCATCCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATATTGTGAGATGAGAATGGGGTACCACGTTCCATCTCATCCTTT  100

seq1  CTCTTCTCTTTCAGTTCCCTCTTTTTTTATTTCCCTCATTCTGTATGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTCTTTCAGTTCCCTCTTTTTTTATTTCCCTCATTCTGTATGACA  150

seq1  TCATTACCTTCCCAGATCCCAGACAGCTTATACAGGTTTCCTTACAGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTACCTTCCCAGATCCCAGACAGCTTATACAGGTTTCCTTACAGCCA  200

seq1  ATACAAAAGGGCCAGTACAAAGGGACCATCACAAAATACATGACTTTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAAGGGCCAGTACAAAGGGACCATCACAAAATACATGACTTTGAT  250

seq1  GAATTGGCCATTCAAAGAACTTCCTGATCTTTCTTTTGTTGTTTTGGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGGCCATTCAAAGAACTTCCTGATCTTTCTTTTGTTGTTTTGGGTT  300

seq1  TGTAAGTTGTTTAAATCAACACTGCATTGTTTTTCACACAGTTCTTCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTTGTTTAAATCAACACTGCATTGTTTTTCACACAGTTCTTCAGG  350

seq1  TCATGGGATGCTCTTATTCAATAGGTTTCATAACCTGTGACAAGAGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGGATGCTCTTATTCAATAGGTTTCATAACCTGTGACAAGAGACAC  400

seq1  CCAAAGGCCTCTTTACTCAGATGTCTGCTGTATGAATGAGAAAATGGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGCCTCTTTACTCAGATGTCTGCTGTATGAATGAGAAAATGGGAG  450

seq1  AGAGAGGGAAAGAGACATGCTGGGGGCAGATGTACTATCTTTCTTCCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGGAAAGAGACATGCTGGGGGCAGATGTACTATCTTTCTTCCTCC  500

seq1  TCATCCTTGGTCACGGTTTCTTCCTCTTCTCCCTTTATTACTTCCCCATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTTGGTCACGGTTTCTTCCTCTTCTCCCTTTATTACTTCCCCATC  550

seq1  ATTGAGCTTCTCCATATGGCTAGCTTGGGTTTCCTCATACTTCTTGCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGCTTCTCCATATGGCTAGCTTGGGTTTCCTCATACTTCTTGCCAC  600

seq1  TTCAGGATAATGAAGCTTCTTACATGGTCATTGATGTCCCAAGGAAACGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGATAATGAAGCTTCTTACATGGTCATTGATGTCCCAAGGAAACGG  650

seq1  AAACTTTCAACTTTGCCTGAATGGAAACCGGAAGATGTTCCAAAATTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTCAACTTTGCCTGAATGGAAACCGGAAGATGTTCCAAAATTCAA  700

seq1  CTAGAATGTAAATCATTTGCATCCTATTGGGTATTCTGGTGCTTGGGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAATGTAAATCATTTGCATCCTATTGGGTATTCTGGTGCTTGGGACT  750

seq1  AATAAAAGGGCAATTAGACTTCAGTTTCTTTTAATTTTCTATTTATTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAGGGCAATTAGACTTCAGTTTCTTTTAATTTTCTATTTATTCAT  800

seq1  TCATTCACTCGTTCATTCATTCACTATATATCCATATCACAGTCACCCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCACTCGTTCATTCATTCACTATATATCCATATCACAGTCACCCCT  850

seq1  TTTCCTGGTACCCCCCTTCACATCCCTTCCTCCCATCCATTCTCTTCTAA  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTTCCTGGTACCCCCCTTCACATCCCTTCCTCCCATCCATTCTCTTCT-A  899

seq1  AATGGGTATTGCTGTACCCTGGCACATCAATTCATTGAAGGAATAGGCAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTATTGCTGTACCCTGGCACATCAATTCATTGAAGGAATAGGCAC  949

seq1  ATCCTCTCCCACTGAGGCCAGAAAAAGCAGCCCAGTTAGGGAACCAGGAT  1000
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATCCTCTCCCACTGAGGCCAG-AAAAGCAGCCCAGTTAGGGAACCAGGAT  998

seq1  CCACATACCTGCAACAGATTTAGGCAGAGCCCCTGCTCCAGTTTTTGGGG  1050
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCACATACCTGCAACAGATTTAGGCAGAGCCCCTGCTCCAGTTTTT-GGG  1047

seq1  GACTCACATGAAGACCAAGTTGCACTTCTGCAACATAT-GTGTATGGGAG  1099
      |||||||||||||||| ||||||   ||||||| |||| |||| ||||||
seq2  GACTCACATGAAGACC-AGTTGCCACTCTGCAA-ATATGGTGTTTGGGAG  1095

seq1  ACTAGGTCCAGTCCATGCTTGCTTTGTGGTTGGTGGTTCAGTCCCTGGGA  1149
      |||||   |||| ||||||||| |||  |||||  ||||||||| |||||
seq2  ACTAG--TCAGT-CATGCTTGCCTTGGTGTTGG-AGTTCAGTCCTTGGGA  1141

seq1  GCCCC  1154
       ||| 
seq2  CCCC-  1145

seq1: chr3_63149213_63150373
seq2: B6Ng01-051B07.g_67_1212 (reverse)

seq1  ACCCTAGCAGTTCATGTGGTTGATAAGCAGTTACAGTCGTTCACATTTTT  50
      |||||||||||||||||||||||| ||||| |||||||||  ||||||||
seq2  ACCCTAGCAGTTCATGTGGTTGAT-AGCAG-TACAGTCGT--ACATTTTT  46

seq1  GCTTAATTTTTATTAATTAAGCAAAGAATCTGTGAATCATAATGTACCAT  100
      ||||||||||   |||||||||  |||||||| | |||||||||||||  
seq2  GCTTAATTTT--ATAATTAAGC--AGAATCTGGGGATCATAATGTACCCA  92

seq1  TGTTCTCAACAGATTTCACCTTGGGCTTCTTAAAAAGTCTAGTTATGTTT  150
      |||||||||||||||||| |||||||||||| ||||||||||||||||||
seq2  TGTTCTCAACAGATTTCA-CTTGGGCTTCTT-AAAAGTCTAGTTATGTTT  140

seq1  CTGCCTTTCCCACAGAAGTCTAGCTGTGTTTCTGCCTTCATGATGTTTAA  200
      ||||  || ||||||||||||||||||| ||||||  |||||||||||||
seq2  CTGC--TTTCCACAGAAGTCTAGCTGTG-TTCTGC--TCATGATGTTTAA  185

seq1  TTGAAAGCACGTGTCTATTTTCCAGAAACAGTGACTTTAATGTACACTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGCACGTGTCTATTTTCCAGAAACAGTGACTTTAATGTACACTGT  235

seq1  CATGTATTAGACTTATAAAGTTGTCTATTTCCCAACTGACCATTTCATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATTAGACTTATAAAGTTGTCTATTTCCCAACTGACCATTTCATTA  285

seq1  AGTACCAAAAATGTAAGCCACAGTTTATTTGAAATGTGAGAAAGGTATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCAAAAATGTAAGCCACAGTTTATTTGAAATGTGAGAAAGGTATAC  335

seq1  TATTTTCTAATTGCTACTGAAATTAAGGCAATGCAGTGTAATGGCATAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTAATTGCTACTGAAATTAAGGCAATGCAGTGTAATGGCATAGT  385

seq1  AAAACAACTTATTGAAATGCTACTTCTTGCTTAATTGAACCAATGGTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAACTTATTGAAATGCTACTTCTTGCTTAATTGAACCAATGGTGAC  435

seq1  ATTGAGAGCTAATATGGTATTCTTCTAAAAGGACAGCAAGAACTAGGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAGCTAATATGGTATTCTTCTAAAAGGACAGCAAGAACTAGGACA  485

seq1  TTCTGAAGATAACTTCGGCTTTCTGTATGTAATACGATGTATTTAACTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGATAACTTCGGCTTTCTGTATGTAATACGATGTATTTAACTGA  535

seq1  CAAATTTTGATAACAACAATATTGCTTTAAAACACACTGATCCTATATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTTGATAACAACAATATTGCTTTAAAACACACTGATCCTATATGC  585

seq1  CCATTTACATCCATTTTGCAGGGAGGTCAGAATTCATCTGTAAATTTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTACATCCATTTTGCAGGGAGGTCAGAATTCATCTGTAAATTTATA  635

seq1  TTTCTTAGCTTACTGTTGCATCTACAAGGGCAGCATGCACCTTCGTTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTAGCTTACTGTTGCATCTACAAGGGCAGCATGCACCTTCGTTTTA  685

seq1  AAACCTGTAATGAAGAAAGAACTCATGGACTATATTAGACTATTAATAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTGTAATGAAGAAAGAACTCATGGACTATATTAGACTATTAATAAC  735

seq1  CTTTTGTTTTGAGGTTGAAGACTTGATTGCACAAATCCGGGAAGTTTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTTTTGAGGTTGAAGACTTGATTGCACAAATCCGGGAAGTTTTTA  785

seq1  TTCAGACTTTGGATGACCTTACTTGGATGGATGCTGAGACAAAAAAGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGACTTTGGATGACCTTACTTGGATGGATGCTGAGACAAAAAAGAAA  835

seq1  GCTGAAGAAAAGGTAAAGACCAGTCAGAGCCATTGGAGCAAATCAATCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGAAAAGGTAAAGACCAGTCAGAGCCATTGGAGCAAATCAATCTA  885

seq1  TAGGCAAAGGTCAACTTCAAAAATATATAGGAAAAAATATAATAAAAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAAAGGTCAACTTCAAAAATATATAGGAAAAAATATAATAAAAAAT  935

seq1  TGCCTAAAAGCTCAGTTGGTAAAGGCTTGCCTTGTAAGCATGACCTGAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAAAAGCTCAGTTGGTAAAGGCTTGCCTTGTAAGCATGACCTGAGT  985

seq1  TCAACCTGAGTTTAATCTCTAAACTCATGTTTAAAAACAAAACAACAACA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTGAGTTTAATCTCTAAACTCATGTTTAAAAACAAAACAACAACA  1035

seq1  ACAAAAACAATAAAAACAAGTAGGCACGGTGGGACAGATCTGAGTTCAAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACAATAAAAACAAGTAGGCACGGTGGGACAGATCTGAGTTCAAG  1085

seq1  TGCTGAGAAGGTAGAGATGAGTATATCATTGAAGCTCACTAGCCAGCCAG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGAAGGTAGAGATGAGTATATCATTGAAGCTCACTAGCCAGCCAG  1135

seq1  CTAGTGAATTC  1161
      |||||||||||
seq2  CTAGTGAATTC  1146