BAC Information

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BAC

Clone NameB6Ng01-051F17
Chromosome3 (Build37)
Map Location 41,968,209 - 41,969,202
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
Downstream geneLOC100039204, LOC100039219
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051F17.bB6Ng01-051F17.g
ACCDH875026DH875027
length9931,162
definitionDH875026|Mus musculus domesticus DNA, BAC clone: B6Ng01-051F17, 5' end.DH875027|Mus musculus domesticus DNA, BAC clone: B6Ng01-051F17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccttttcctgagccttacttagttttgtcttaaaatccatcctc
agctttggtaccttggctttttgggtaagctgccttttcttgttctcaag
gagccatagcttgttactgtgctgtatggtggtagaggcaattaatcctc
ttcattatcactgattctcctttttcaccaatgatgctaatagagtaact
actaaagatgtattggtgcgtctgaagtcagtcataccaatattcctgca
aaccaagacttgccttacttttaataaatactcttaatgtatctgcttgt
ctcccatttgacttagtgcaaataagaagtgattgaaaattacggcacta
tattttagcaaagattcgactaagtcattatcaagaccattttgtattac
cagaaaactcctgtgcatttctagcaatcaggtttttgcagtagcctgca
tctcaaacaaaaggttggtctactaaacctttactcaaagtcagacaata
tcaatttattttctggtagactttcaagcagccaagtcttttcttgatat
tatttttatatgaaatgtttaaacttaggcacctgaatcatctatttttt
cttttttggggggagggttgtagccatgagcatatgtgatgatgccttct
gaaatattaacctctactttctttaaccctttcttcacaaaacctttact
ctattcaatcacagataccaactttgcctctggagacatgaaggattgtt
tcataagactcagaaaagaaagaagcaataagtcagtggtctccttatcc
ccaaacaggtttttgagaaacaaaagggaaaacccaatggttggcaatac
agagtctttacatcacaagagcttcaggaagatagaggtccctcttctgc
ctcttatattggctaggatagctacaaagaggaaaggagggaagatggct
cattatggtgttgagaggaagtcaaatggggagaggggggatg

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcaaaa
ggacccagatgtagctgtctcttggtgagactatgcccggggcctagcaa
acacagaagtggatgctcacagtcagctaatggatggatcacaggctccc
tatggaggagctagagaagtacccaaggagctaaagggatctcaacccta
taggtggaacaacattatgactaaccagtaccctgagctctgactctagc
tgctatgtatcaaagatgctagtcgcatcactgcaagagagcccattgga
ccccaaactttgtgtgccccgtaccaggaaacgccaggccaagatgagaa
ttgttggctggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41968209_41969202
seq2: B6Ng01-051F17.b_44_1036

seq1  GAATTCCCTTTTCCTGAGCCTTACTTAGTTTTGTCTTAAAATCCATCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTTTCCTGAGCCTTACTTAGTTTTGTCTTAAAATCCATCCTC  50

seq1  AGCTTTGGTACCTTGGCTTTTTGGGTAAGCTGCCTTTTCTTGTTCTCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGGTACCTTGGCTTTTTGGGTAAGCTGCCTTTTCTTGTTCTCAAG  100

seq1  GAGCCATAGCTTGTTACTGTGCTGTATGGTGGTAGAGGCAATTAATCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATAGCTTGTTACTGTGCTGTATGGTGGTAGAGGCAATTAATCCTC  150

seq1  TTCATTATCACTGATTCTCCTTTTTCACCAATGATGCTAATAGAGTAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTATCACTGATTCTCCTTTTTCACCAATGATGCTAATAGAGTAACT  200

seq1  ACTAAAGATGTATTGGTGCGTCTGAAGTCAGTCATACCAATATTCCTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAGATGTATTGGTGCGTCTGAAGTCAGTCATACCAATATTCCTGCA  250

seq1  AACCAAGACTTGCCTTACTTTTAATAAATACTCTTAATGTATCTGCTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAGACTTGCCTTACTTTTAATAAATACTCTTAATGTATCTGCTTGT  300

seq1  CTCCCATTTGACTTAGTGCAAATAAGAAGTGATTGAAAATTACGGCACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCATTTGACTTAGTGCAAATAAGAAGTGATTGAAAATTACGGCACTA  350

seq1  TATTTTAGCAAAGATTCGACTAAGTCATTATCAAGACCATTTTGTATTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAGCAAAGATTCGACTAAGTCATTATCAAGACCATTTTGTATTAC  400

seq1  CAGAAAACTCCTGTGCATTTCTAGCAATCAGGTTTTTGCAGTAGCCTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAACTCCTGTGCATTTCTAGCAATCAGGTTTTTGCAGTAGCCTGCA  450

seq1  TCTCAAACAAAAGGTTGGTCTACTAAACCTTTACTCAAAGTCAGACAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAACAAAAGGTTGGTCTACTAAACCTTTACTCAAAGTCAGACAATA  500

seq1  TCAATTTATTTTCTGGTAGACTTTCAAGCAGCCAAGTCTTTTCTTGATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTATTTTCTGGTAGACTTTCAAGCAGCCAAGTCTTTTCTTGATAT  550

seq1  TATTTTTATATGAAATGTTTAAACTTAGGCACCTGAATCATCTATTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTATATGAAATGTTTAAACTTAGGCACCTGAATCATCTATTTTTT  600

seq1  CTTTTTTGGGGGGAGGGTTGTAGCCATGAGCATATGTGATGATGCCTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTGGGGGGAGGGTTGTAGCCATGAGCATATGTGATGATGCCTTCT  650

seq1  GAAATATTAACCTCTACTTTCTTTAACCCTTTCTTCACAAAACCTTTACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATTAACCTCTACTTTCTTTAACCCTTTCTTCACAAAACCTTTACT  700

seq1  CTATTCAATCACAGATACCAACTTTGCCTCTGGAGACATGAAGGATTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCAATCACAGATACCAACTTTGCCTCTGGAGACATGAAGGATTGTT  750

seq1  TCATAAGACTCAGAAAAGAAAGAAGCAATAAGTCAGTGGTCTCCTTATCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGACTCAGAAAAGAAAGAAGCAATAAGTCAGTGGTCTCCTTATCC  800

seq1  CCAAACAGGTTTTTGAGAAACAAAAGGGAAAACCCAATGGTTGGCAATAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACAGGTTTTTGAGAAACAAAAGGGAAAACCCAATGGTTGGCAATAC  850

seq1  AGAGTCTATTACATCACAAGAGCTTCAGGAAGAATAGAGGTCCCTCTTCT  900
      ||||||| |||||||||||||||||||||||| |||||||||||||||||
seq2  AGAGTCT-TTACATCACAAGAGCTTCAGGAAG-ATAGAGGTCCCTCTTCT  898

seq1  GCCTCTTATATTGGCTAGGATAGCTACAAAGAGGAAAGGAGGGAAGATGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTATATTGGCTAGGATAGCTACAAAGAGGAAAGGAGGGAAGATGG  948

seq1  CTCAATATGGTG-TGAGAGGAAGTCAAATGGGGAGAGGGGGGATG  994
      |||| ||||||| ||||||||||||||||||||||||||||||||
seq2  CTCATTATGGTGTTGAGAGGAAGTCAAATGGGGAGAGGGGGGATG  993


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