BAC Information

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BAC

Clone NameB6Ng01-056D24
Chromosome3 (Build37)
Map Location 44,696,362 - 44,697,502
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC676484, LOC100039296, Pcdh10, LOC100039282, LOC433580, LOC671801
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056D24.bB6Ng01-056D24.g
ACCDH878472DH878473
length1,1391,143
definitionDH878472|Mus musculus domesticus DNA, BAC clone: B6Ng01-056D24, 5' end.DH878473|Mus musculus domesticus DNA, BAC clone: B6Ng01-056D24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttagagggactgtgtccatgaaaaaaaatatataatttttaaa
aggtatatttcatgttaatattctaggtaaaatatttatttattttcatc
aagattttttcttaccttacacaaaattcttatttaaactctactaaaaa
ttgtaggcaaaacaagtataaagaaaatctattttgtctcagcttatttc
aacaaaaatcaaaagttagtaaattaatcaatgatttctttaaatatgta
ttttatttataagtaaaatatttattatttgaaagtttaacaattcatac
aatataatattgatcatatcaactcaccaaggtctcaccccaattttctc
tacaacctcattcatccccctcatgtctatctctcaacttcatgacctca
ctgagtattcctatgtaataaacatttgaattcagttagtaatgcctgga
tgcctatatgcacattgatctatggccatttcttgggatatgaagatctc
accagtgatactgtccaaatagaagacagggtccccatccttcagcagct
attaaataccaatagatgttcaaatataggtaggacctcacagacccttg
ctgcattctggttggacttttgattgacttgatattatggagttggtgat
tgtaagcaagcaccccatatccaaaagtcaacacaccccagtactactcc
tcatgtaaaagttactagattctttcaacccttatttgcaaagaacactg
aatctggaatgataagagtctggtatatgtaacctatccacatctgaaca
ctgtatgtcattttcaattgacatatgggtcagttgcaagtttttgcatt
catcattatgcactacaaaaggaagcttctgtgacaaatacagagagcat
cacatatctatgggtatgaaataaatatttaagatgcagtttgactgcat
gaccacttagcaatacagcaaaagaagattgttaacctgagcctatgatc
tctcaggcatcatcttttttaccaggtaacctactataggatcatttgta
ttaactgtttaataaaactattaaaatatttataatattatggaggtttt
agtaataaaataagtctgactttccccaagcattcagag
gaattctcacctgaggaatactgaatggctaagaaacacctgaaaaaatg
ttcagcctccttagtcatcagggaaatgcaaatcaaaagaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgaggatatggagaaagaggaacaatcctccactgttggtg
ggattgtaagcttgtacaaccactctggaaatcagtctggcagtttctca
gaaaattggacatattactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgttccaacaagtaagaaagaagcatgctccactat
gttcatagcagccttgtttataataaccagtagctggaaagaacccagat
gttcctcaacagaggaatggacacaaaaaatgtggtacatttacacaatg
gagaactactcagctattaaaaagaatgaatttatgaaattactaggcaa
atggttggacctggaggccattatcctgagtgataacccaatcacaaaag
atctcaaatgatatgtactcactgataagtggatattagcccagaaaccc
agaatacttaagatataagttacaatttacaaaacacatgaaactcaaga
agaaagacccaagtgtggactctgccccttcttagaattgggaacaaaca
cccatggaaggagttataaagacaaagtttggagctgagacaaaaggatg
gaccatctagtaactgccatatctagagatccatcccataatcagcctcc
aaacgctgacaccattacatacactagcaagattttgctgataggaccct
gatatagctgtctctaagaagtctacaccggggcctagcaaacacataag
tggatgctcacagtcagttattgatggatcacagggccccaatgtaggag
ctagagaagtacccaagagctaaagggactgcaaccctatagtgacacat
tatgactaccagtaccctggagctctgactctagctgcatatgtatcaaa
gatgctagtcgcatcctgaagaagagcattgacttgcaactttatgcctc
agtacagggacgctcagccaaagtgggaatgacgttacgcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_44696362_44697502
seq2: B6Ng01-056D24.b_49_1187 (reverse)

seq1  CTCTGAATGCTTGGGGGAAAGTCAGACTTATTTTATTTACTAAAA-CTTC  49
      |||||||||||| |||||||||||||||||||||| ||||||||| || |
seq2  CTCTGAATGCTT-GGGGAAAGTCAGACTTATTTTA-TTACTAAAACCTCC  48

seq1  ATAATATTAT-AATATTTTAATAGTTTTTATTAAACAGTTAATACAAATG  98
      |||||||||| ||||||||||||| |||||||||||||||||||||||||
seq2  ATAATATTATAAATATTTTAATAG-TTTTATTAAACAGTTAATACAAATG  97

seq1  ATCCTATAGTAGGTTAACCTGGT-AAAAAGATGATGCCTGAAGAGATCAT  147
      ||||||||||||||| ||||||| |||||||||||||||| |||||||||
seq2  ATCCTATAGTAGGTT-ACCTGGTAAAAAAGATGATGCCTG-AGAGATCAT  145

seq1  AGGCTCAGGTTAACAATCTTCTTTTGCTGTATTGCTAAGTGGTCATGCAG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCAGGTTAACAATCTTCTTTTGCTGTATTGCTAAGTGGTCATGCAG  195

seq1  TCAAACTGCATCTTAAATATTTATTTCATACCCATAGATATGTGATGCTC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTGCATCTTAAATATTTATTTCATACCCATAGATATGTGATGCTC  245

seq1  TCTGTATTTGTCACAGAAGCTTCCTTTTGTAGTGCATAATGATGAATGCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATTTGTCACAGAAGCTTCCTTTTGTAGTGCATAATGATGAATGCA  295

seq1  AAAACTTGCAACTGACCCATATGTCAATTGAAAATGACATACAGTGTTCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTGCAACTGACCCATATGTCAATTGAAAATGACATACAGTGTTCA  345

seq1  GATGTGGATAGGTTACATATACCAGACTCTTATCATTCCAGATTCAGTGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGATAGGTTACATATACCAGACTCTTATCATTCCAGATTCAGTGT  395

seq1  TCTTTGCAAATAAGGGTTGAAAGAATCTAGTAACTTTTACATGAGGAGTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCAAATAAGGGTTGAAAGAATCTAGTAACTTTTACATGAGGAGTA  445

seq1  GTACTGGGGTGTGTTGACTTTTGGATATGGGGTGCTTGCTTACAATCACC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGGGGTGTGTTGACTTTTGGATATGGGGTGCTTGCTTACAATCACC  495

seq1  AACTCCATAATATCAAGTCAATCAAAAGTCCAACCAGAATGCAGCAAGGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCATAATATCAAGTCAATCAAAAGTCCAACCAGAATGCAGCAAGGG  545

seq1  TCTGTGAGGTCCTACCTATATTTGAACATCTATTGGTATTTAATAGCTGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGAGGTCCTACCTATATTTGAACATCTATTGGTATTTAATAGCTGC  595

seq1  TGAAGGATGGGGACCCTGTCTTCTATTTGGACAGTATCACTGGTGAGATC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGATGGGGACCCTGTCTTCTATTTGGACAGTATCACTGGTGAGATC  645

seq1  TTCATATCCCAAGAAATGGCCATAGATCAATGTGCATATAGGCATCCAGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATCCCAAGAAATGGCCATAGATCAATGTGCATATAGGCATCCAGG  695

seq1  CATTACTAACTGAATTCAAATGTTTATTACATAGGAATACTCAGTGAGGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACTAACTGAATTCAAATGTTTATTACATAGGAATACTCAGTGAGGT  745

seq1  CATGAAGTTGAGAGATAGACATGAGGGGGATGAATGAGGTTGTAGAGAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGTTGAGAGATAGACATGAGGGGGATGAATGAGGTTGTAGAGAAA  795

seq1  ATTGGGGTGAGACCTTGGTGAGTTGATATGATCAATATTATATTGTATGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGGTGAGACCTTGGTGAGTTGATATGATCAATATTATATTGTATGA  845

seq1  ATTGTTAAACTTTCAAATAATAAATATTTTACTTATAAATAAAATACATA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTAAACTTTCAAATAATAAATATTTTACTTATAAATAAAATACATA  895

seq1  TTTAAAGAAATCATTGATTAATTTACTAACTTTTGATTTTTGTTGAAATA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGAAATCATTGATTAATTTACTAACTTTTGATTTTTGTTGAAATA  945

seq1  AGCTGAGACAAAATAGATTTTCTTTATACTTGTTTTGCCTACAATTTTTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGACAAAATAGATTTTCTTTATACTTGTTTTGCCTACAATTTTTA  995

seq1  GTAGAGTTTAAATAAGAATTTTGTGTAAGGTAAGAAAAAATCTTGATGAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGTTTAAATAAGAATTTTGTGTAAGGTAAGAAAAAATCTTGATGAA  1045

seq1  AATAAATAAATATTTTACCTAGAATATTAACATGAAATATACCTTTTAAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAATATTTTACCTAGAATATTAACATGAAATATACCTTTTAAA  1095

seq1  AATTATATATTTTTTTTCATGGACACAGTCCCTCTAAAGAATTC  1141
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATATATTTTTTTTCATGGACACAGTCCCTCTAAAGAATTC  1139