BAC Information

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BAC

Clone NameB6Ng01-061O06
Chromosome3 (Build37)
Map Location 56,940,378 - 56,941,514
singlet/doubletsinglet
Overlap geneLOC666585
Upstream geneLOC100040139
Downstream geneTm4sf1, LOC383862, Tm4sf4, Wwtr1, Commd2, Gm410, EG623114, Rnf13, LOC675537, Pfn2, EG433594, LOC100040216
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061O06.bB6Ng01-061O06.g
ACCDH882448DH882449
length1,131996
definitionDH882448|Mus musculus domesticus DNA, BAC clone: B6Ng01-061O06, 5' end.DH882449|Mus musculus domesticus DNA, BAC clone: B6Ng01-061O06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaactgttttttcagacattcttttaaatcttctgtagaaattg
ttgaactgctttctccagaaacttcatatagttggtaactcaggtcttca
ggtcctaagatcattccatcagctgacttttcaatgcctgcagtatttct
tgtggtttcacaagatggagaatacattacttcacattccttacacatat
cttctaaaagttctgtattgccctcagggtgagatccagatgtggctgca
gtttcatgccaagagggttcagttacaggagtgccatccggatttccaga
aggaatttcttgccatactttggcattaggatttaaaccagtgcctttag
atgtcacctgctcaacgaagagcaacatgtctgcttccgctcgtcccaat
cgttcccgctgctgcctctactccaactggctcccaggcccgggcctgtc
ggtaggataaggacaattgccttgcccctccacccagcagtggacccggc
tcctcccccgctgtcagccgctgtgccctgacccgcccagtcccgcctcc
tgggaagcaacaactgcttcccgttttggaggcaaactgcttcctggggc
gaagggacgcccgacccccacccccaccccaccccctagcgtgcttcgat
ctggctggctcttctctggcggtgatggcgaaagtgtgtggtctgtgtca
ggtgtgggtcgatgctcaggaggccgcgctgggctgtgcaaaacgctcac
tgacgcatttgtactttctaccaaaaagctgaccaccgcactctagaggt
attttctaagaaatgtaatttaacaagaaatcatttatgatcagagtatt
ctgtggtacaaagaatatttaaataaagtcaaacaatagcctatcatcag
gaagcagccatcctatcagagagagacaaaactaacacatgttatctatg
gctaactaagaaaaagatgatagagtaaaaagtaatatggatgggttggt
aaaccgtctatattcgtctgttacaaataccataacaaaatgcccggggc
gagctatgtatgaggaaagggcttaatttggttcccatttgggttattag
aatacctcagggcttacgatgaggggcctga
gaattctattgagtatttttgcatcaatattcataagcaagattggtttg
aagttctctttttcgattgggtccttgtgtagtttaggtatgttggacct
tcattttcattaaattctaaaaagtctttaatttctttctttcttttttt
ccctgatcaagttatcactaagtagagagttgttcagtttccacatgttt
gtgggttttttgttgttattgaagatcagccttaggctacagtgatctga
tagaatggatgggattatttcaatcttgtattagataagggttattttgt
gaccaattatacggtcaattctggagaaggtatcatgaggtgtgagaaga
aggtgtattcatttttttttagggtgaaatgttctgtagatatctgttaa
acccattgggttcataacctctattagtttcactgtgtctatatttagtt
tctgtttcagtgacctgtctattggtgaaagtggggtgttgaaatctcct
actattattgtgtgaggttcaatgtgtgtttgagctttagtaaagtttct
tttatgaatgtgggtgccctggcacttggggcatagatgttcagaattaa
gactttgtcttggtggagtttccctttgatgaatatgaagtgtccttctt
catcacgtttgataacttttggttgagtctattttattggatattagtat
ggcaactccagcttgtttcctgggaccatttgcttgggaagacctttttc
catcctttatgctgagatagtgtctgtctttgtcattgaggtttattttc
ttgcatgcagcaaaatgttgtatcttgttttgtgtatccagtctgttagt
ttatatctttttataggtgagttgaatccttaatattgagagatattaaa
gaaaaatgactgttggttcctggtatgtttgattttggaggtgacttcat
gtgcttggggtctctcctttgactttgttggaaaatcttaaaaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_56940378_56941514
seq2: B6Ng01-061O06.b_49_1179

seq1  GAATTCCAACTGTTTTTTCAGACATTCTTTTAAATCTTCTGTAGAAATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACTGTTTTTTCAGACATTCTTTTAAATCTTCTGTAGAAATTG  50

seq1  TTGAACTGCTTTCTCCAGAAACTTCATATAGTTGGTAACTCAGGTCTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTGCTTTCTCCAGAAACTTCATATAGTTGGTAACTCAGGTCTTCA  100

seq1  GGTCCTAAGATCATTCCATCAGCTGACTTTTCAATGCCTGCAGTATTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTAAGATCATTCCATCAGCTGACTTTTCAATGCCTGCAGTATTTCT  150

seq1  TGTGGTTTCACAAGATGGAGAATACATTACTTCACATTCCTTACACATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTTCACAAGATGGAGAATACATTACTTCACATTCCTTACACATAT  200

seq1  CTTCTAAAAGTTCTGTATTGCCCTCAGGGTGAGATCCAGATGTGGCTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAAAAGTTCTGTATTGCCCTCAGGGTGAGATCCAGATGTGGCTGCA  250

seq1  GTTTCATGCCAAGAGGGTTCAGTTACAGGAGTGCCATCCGGATTTCCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATGCCAAGAGGGTTCAGTTACAGGAGTGCCATCCGGATTTCCAGA  300

seq1  AGGAATTTCTTGCCATACTTTGGCATTAGGATTTAAACCAGTGCCTTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTTCTTGCCATACTTTGGCATTAGGATTTAAACCAGTGCCTTTAG  350

seq1  ATGTCACCTGCTCAACGAAGAGCAACATGTCTGCTTCCGCTCGTCCCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACCTGCTCAACGAAGAGCAACATGTCTGCTTCCGCTCGTCCCAAT  400

seq1  CGTTCCCGCTGCTGCCTCTACTCCAACTGGCTCCCAGGCCCGGGCCTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCCCGCTGCTGCCTCTACTCCAACTGGCTCCCAGGCCCGGGCCTGTC  450

seq1  GGTAGGATAAGGACAATTGCCTTGCCCCTCCACCCAGCAGTGGACCCGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGATAAGGACAATTGCCTTGCCCCTCCACCCAGCAGTGGACCCGGC  500

seq1  TCCTCCCCCGCTGTCAGCCGCTGTGCCCTGACCCGCCCAGTCCCGCCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCCCGCTGTCAGCCGCTGTGCCCTGACCCGCCCAGTCCCGCCTCC  550

seq1  TGGGAAGCAACAACTGCTTCCCGTTTTGGAGGCAAACTGCTTCCTGGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGCAACAACTGCTTCCCGTTTTGGAGGCAAACTGCTTCCTGGGGC  600

seq1  GAAGGGACGCCCGACCCCCACCCCCACCCCACCCCCTAGCGTGCTTCGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGACGCCCGACCCCCACCCCCACCCCACCCCCTAGCGTGCTTCGAT  650

seq1  CTGGCTGGCTCTTCTCTGGCGGTGATGGCGAAAGTGTGTGGTCTGTGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGGCTCTTCTCTGGCGGTGATGGCGAAAGTGTGTGGTCTGTGTCA  700

seq1  GGTGTGGGTCGATGCTCAGGAGGCCGCGCTGGGCTGTGCAAAACGCTCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGGGTCGATGCTCAGGAGGCCGCGCTGGGCTGTGCAAAACGCTCAC  750

seq1  TGACGCATTTGTACTTTCTACCAAAAAGCTGACCACCGCACTCTAGAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGCATTTGTACTTTCTACCAAAAAGCTGACCACCGCACTCTAGAGGT  800

seq1  ATTTTCTAAGAAATGTAATTTAACAAGAAATCATTTATGATCAGAGTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTAAGAAATGTAATTTAACAAGAAATCATTTATGATCAGAGTATT  850

seq1  CTGTGGTACAAAGAATATTTAAATAAAGTCAAAACAATAGCCTATCATCA  900
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTGTGGTACAAAGAATATTTAAATAAAGTC-AAACAATAGCCTATCATCA  899

seq1  GGAAGCAGCCATCCTATCAGAGAGAGACAAAACTAAACACATGTTATCTA  950
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GGAAGCAGCCATCCTATCAGAGAGAGACAAAACT-AACACATGTTATCTA  948

seq1  TGGCTAACTAAGAAAAAAGATGATAGAGTAAAAAAGTAATATGGATGGTT  1000
      |||||||||||| |||||||||||||||| |||||||||||||||||| |
seq2  TGGCTAACTAAG-AAAAAGATGATAGAGT-AAAAAGTAATATGGATGGGT  996

seq1  TGGTAAACCGTCTATATTCGTCTGTTTACAAATACCATAACAAAATGCCC  1050
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGGTAAACCGTCTATATTCGTCTG-TTACAAATACCATAACAAAATGCCC  1045

seq1  GGGGCGAGCTATGTATAGAGGAAAAGGGCTT-ATTTGGTTCACATTTGGT  1099
      |||||||||||||||| |||| ||||||||| ||||||||| ||||||| 
seq2  GGGGCGAGCTATGTAT-GAGG-AAAGGGCTTAATTTGGTTCCCATTTGGG  1093

seq1  TTATTAGAATA-CTCAGGGTTTACGATGAGGTGGCCTGA  1137
      ||||||||||| ||||||| ||||||||||| |||||||
seq2  TTATTAGAATACCTCAGGGCTTACGATGAGG-GGCCTGA  1131