BAC Information

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BAC

Clone NameB6Ng01-067C06
Chromosome3 (Build37)
Map Location 129,062,376 - 129,169,362
singlet/doubletdoublet
Overlap geneLOC100043415, LOC435755, LOC668840
Upstream geneLOC100043393, EG668831, Pitx2, Enpep
Downstream geneElovl6, LOC100043758, Egf, Gm421, Rrh, Nola1, Cfi, Pla2g12a, Casp6, Ccdc109b, Sec24b, EG668844, EG668845, Col25a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067C06.bB6Ng01-067C06.g
ACCDH886121DH886122
length1231,098
definitionDH886121|Mus musculus domesticus DNA, BAC clone: B6Ng01-067C06, 5' end.DH886122|Mus musculus domesticus DNA, BAC clone: B6Ng01-067C06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,169,240 - 129,169,362)(129,062,376 - 129,063,511)
sequence
gaattctttgtcttgaaactatagatccttgccagatgtggtggtttgct
gttgtattgggtatttgtttctttcttgagaaacaacttaaagttggctg
ggtgtgtgtgtgttgggggaggg
gaattcctgtgtgcctggtgttatttttcccattacaaaaatagccacac
acacacacacacacacacacacacacacacacacacacacacacacacac
acacgttttccttttaattgttagagtgtcttcaagaacagaaataagtt
ttgtggaaaatgtgaaggctactattttgatacattgaaaatggggtttg
gccaggtgcggtaacacacacctttggccgggcgtggtgatgtacgcctt
taatcccagcactcaggagggagaagcaggcggatttctgagtttgaggc
caacctggtctacagagtgagttccaggacagccagggctatacagagaa
accctgtctcgaaaaaccaaaaaataaaaacaaaacaactcctttgatgc
cagcactcagggagcagaggcaggcagatctctgtgagttcaaggccatc
ttgatctaccttgtgagttgtagaccagccacagccacaggagaaaaaaa
ataagtttttgctaatgatatttggaataatttattttggagaaaccact
tgttgagtccattttctgctcccacgtgattctcggtgttcatttgccta
atggttaaatgtaatctcttttctcagcttgtgtgaacactgtaaaagaa
ggagggctagtgagctgtcaggaggttttctcctgttggttgtatttccc
agtcaccatcagtgtttgttcttgtctttcctattgatgcattgcttttg
agacaaagaaaaaatatacttagtgtttagggctgaattttataagtggg
cctgaagggatcaatgacctcactgaagttaaattttattcactgtcgtt
catttgtcaagtagcttttggctgtttgagaactgtgggcaatcacagag
aatcagccctgagatctgaaatatgataatgatgattctaaactgatctg
ctagatggaagactaacgtgggatgtatttcttgagatttatttgaccgc
tttataacttctacctctcagtgtataggattgaactcagctacaggcaa
gtattcagaaggcattttgtttaattatatttattaagaatcaaacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_129169240_129169362
seq2: B6Ng01-067C06.b_46_168 (reverse)

seq1  CCCTCCCCCAACACACACACACCCAGCCAACTTTAAGTTGTTTCTCAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCCAACACACACACACCCAGCCAACTTTAAGTTGTTTCTCAAGA  50

seq1  AAGAAACAAATACCCAATACAACAGCAAACCACCACATCTGGCAAGGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACAAATACCCAATACAACAGCAAACCACCACATCTGGCAAGGATC  100

seq1  TATAGTTTCAAGACAAAGAATTC  123
      |||||||||||||||||||||||
seq2  TATAGTTTCAAGACAAAGAATTC  123

seq1: chr3_129062376_129063511
seq2: B6Ng01-067C06.g_69_1166

seq1  GAATTCCTGTGTGCCTGGTGTTATTTTTCCCATTACAAAAATAGCCACAC  50
      |||||||||||||||||||||||||||||||||||||||||||||    |
seq2  GAATTCCTGTGTGCCTGGTGTTATTTTTCCCATTACAAAAATAGC----C  46

seq1  ACACACACACACACACACACACACACACACACACACACACACACACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACACACACACACAC  96

seq1  ACACACACGTTTTCCTTTTAATTGTTAGAGTGTCTTCAAGAACAGAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACGTTTTCCTTTTAATTGTTAGAGTGTCTTCAAGAACAGAAATA  146

seq1  AGTTTTGTGGAAAATGTGAAGGCTACTATTTTGATACATTGAAAATGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGTGGAAAATGTGAAGGCTACTATTTTGATACATTGAAAATGGGG  196

seq1  TTTGGCCAGGTGCGGTAACACACACCTTTGGCCGGGCGTGGTGATGTACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCCAGGTGCGGTAACACACACCTTTGGCCGGGCGTGGTGATGTACG  246

seq1  CCTTTAATCCCAGCACTCAGGAGGGAGAAGCAGGCGGATTTCTGAGTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAATCCCAGCACTCAGGAGGGAGAAGCAGGCGGATTTCTGAGTTTG  296

seq1  AGGCCAACCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTATACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAACCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTATACAG  346

seq1  AGAAACCCTGTCTCGAAAAACCAAAAAATAAAAACAAAACAACTCCTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCCTGTCTCGAAAAACCAAAAAATAAAAACAAAACAACTCCTTTG  396

seq1  ATGCCAGCACTCAGGGAGCAGAGGCAGGCAGATCTCTGTGAGTTCAAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGCACTCAGGGAGCAGAGGCAGGCAGATCTCTGTGAGTTCAAGGC  446

seq1  CATCTTGATCTACCTTGTGAGTTGTAGACCAGCCACAGCCACAGGAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGATCTACCTTGTGAGTTGTAGACCAGCCACAGCCACAGGAGAAA  496

seq1  AAAAATAAGTTTTTGCTAATGATATTTGGAATAATTTATTTTGGAGAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAGTTTTTGCTAATGATATTTGGAATAATTTATTTTGGAGAAAC  546

seq1  CACTTGTTGAGTCCATTTTCTGCTCCCACGTGATTCTCGGTGTTCATTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTTGAGTCCATTTTCTGCTCCCACGTGATTCTCGGTGTTCATTTG  596

seq1  CCTAATGGTTAAATGTAATCTCTTTTCTCAGCTTGTGTGAACACTGTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATGGTTAAATGTAATCTCTTTTCTCAGCTTGTGTGAACACTGTAAA  646

seq1  AGAAGGAGGGCTAGTGAGCTGTCAGGAGGTTTTCTCCTGTTGGTTGTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAGGGCTAGTGAGCTGTCAGGAGGTTTTCTCCTGTTGGTTGTATT  696

seq1  TCCCAGTCACCATCAGTGTTTGTTCTTGTCTTTCCTATTGATGCATTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTCACCATCAGTGTTTGTTCTTGTCTTTCCTATTGATGCATTGCT  746

seq1  TTTGAGACAAAGAAAAAATATACTTAGTGTTTTAGGGCTGAATTTTAATA  800
      ||||||||||||||||||||||||||||| |||||||||||||||| |||
seq2  TTTGAGACAAAGAAAAAATATACTTAGTG-TTTAGGGCTGAATTTT-ATA  794

seq1  AGT-GGCCTGAAAGGATCAATGACCTCACTGAAGTTAAATTTTATTCACT  849
      ||| |||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGTGGGCCTGAAGGGATCAATGACCTCACTGAAGTTAAATTTTATTCACT  844

seq1  GTCGTTCATTTGTCTAAGTAGCTTTTGGCTGTTTTGAGAACTGTGGGCAA  899
      |||||||||||||| |||||||||||||||| |||||||||||||||| |
seq2  GTCGTTCATTTGTC-AAGTAGCTTTTGGCTG-TTTGAGAACTGTGGGC-A  891

seq1  ATCACAGAGAAGTCAGCCCTGAGATCTGAAATATGATAATGATGATTTCA  949
      ||||||||||| |||||||||||||||||||||||||||||||||||   
seq2  ATCACAGAGAA-TCAGCCCTGAGATCTGAAATATGATAATGATGATT---  937

seq1  TAAAACTGATCTGCATAGATGGAAAGACTAACAGTGGGTATGTAATTTCT  999
        |||||||||||| ||||||| ||||||||| ||||| |||| ||||||
seq2  CTAAACTGATCTGC-TAGATGG-AAGACTAAC-GTGGG-ATGT-ATTTCT  982

seq1  TGAGGATTTTATTTTTGACCGCATTTTTATAAACTTCTATCTCTCAAGTG  1049
      ||| ||||   | |||||||||   ||||| |||||||| ||||| ||||
seq2  TGA-GATT---TATTTGACCGC---TTTAT-AACTTCTACCTCTC-AGTG  1023

seq1  TATTATGATTTGAAACTCAGCCTAGAAGCCAAGTAATTCAAGAAAGGCAT  1099
      || || ||||   ||||||| |||  || ||||| |||||   |||||||
seq2  TA-TAGGATT--GAACTCAG-CTA-CAGGCAAGT-ATTCA--GAAGGCAT  1065

seq1  TTTGTTTAAAATTATAGTTCATAAAGAATCAGAACAC  1136
      |||||||  ||||||| || || |||||||| |||||
seq2  TTTGTTT--AATTATA-TTTATTAAGAATCA-AACAC  1098