BAC Information

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BAC

Clone NameB6Ng01-069F21
Chromosome3 (Build37)
Map Location 149,879,853 - 150,026,868
singlet/doubletdoublet
Overlap genenone
Upstream geneEG381483, LOC100040620, LOC100040633
Downstream geneLOC100040455, LOC100040463, LOC623554
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069F21.bB6Ng01-069F21.g
ACCDH887699DH887700
length7141,071
definitionDH887699|Mus musculus domesticus DNA, BAC clone: B6Ng01-069F21, 5' end.DH887700|Mus musculus domesticus DNA, BAC clone: B6Ng01-069F21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,026,158 - 150,026,868)(149,879,853 - 149,880,941)
sequence
gaattctcggttatataaataaataaataaataaataaataaataaataa
ataaataaactgattctaatttagaaaataaacagaatttgaaaagcttc
tattatatatgttaagcaatcctttagtagaaaaagtctcccaagttaga
gcccagacaaggggacaagaagacaaggggaggaagaggaaaaagaagag
caggaggaagaagagcaggaggaggaggaggagaaagaagaaaaaagaag
gaggaggagaaggagaaggaaggagaagaaagaagaaaatgaagaggaag
aggaggaagaggaagaggaggaggagaaggaaaaaagaagaaggaagaag
aagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaaaagaggaattcaatccaaag
ttgtctcccacatttctctagatacatttattgtgtaaggtgagtaacac
tatatgaaacattagcaaatgtctttgtcacaaacctctattccctcttc
aggagacatagcctaagccctgatgtcaggctggtgtcttgtgtgagttg
tttcctattctctgtctcccgtggcctcctattcccatcctttaacccaa
gggctgcctcatgtctgatcgacagtagagcttctttttcctttctctgt
gcattggtttactc
gaattctgttacctttgggataagaacctttgtcttccagtctgtcttag
gaaattactagttttgtcatttttagctaagcagtagccttgcacctagt
gcctggacccatttccagaagttagaatgtcatcatgtagtgaatcaaat
aatgattcccaaaagacatttgcattccactactcccctgtatgaataca
gtaccactcatgaaggaacagaggtgctcctgtcatttcattaaggtcct
tgaagtagtagatacaccttgtttatctgggggtctgcatatatgtttct
tacaagaggaggttttggtgattagagagaaaagagttagcacaggacaa
gcatcagcagtattgacaagggctggtgaaggcagaaagctcatgagcaa
ggaatttcaggatgtgagaaaacttaagagttatctctaattaccataag
gttctgccaaggtggagtagattgtggtctacaagacctgtgttaggcat
ggaagaagggcaatttgcatcatgggaagtcactagattgttgtaattct
ccacatcttctgagagaagcagtgcttagctcatcaccatccagtgggtc
catgatgtctctcccctcccaagcagcagtggattgtgggaatgataaca
agcttcaggatatttggttctgatatactaagattcttactcttattcca
aaattatttccataaaaagaattttatttaagtttttttaattgaccatc
aaccacaacaaaacatgagttaaaaacatcatacataagaatagctaatt
tctaagctaatttaaaattttcagaagtttcgattgtcaagatttgttaa
gaattgtaaaatttgtttttatgatagcataagtcaggctttctttgtgt
aaatttaaatgacagaaacaatgaattatgtgtgattagaaaaaaacatt
atttctagagtaaagcctgcaataaattttgattcttactggatattttt
actaaatatgctcctacttgcgtagagatgagatgacttgcaatgatata
tatatatataatatatatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_150026158_150026868
seq2: B6Ng01-069F21.b_46_759 (reverse)

seq1  GAGTAAGCAAATGCACAGAGAA--GGAAAAGAAGCTCTACTGTCTGATCT  48
      |||||| | |||||||||||||  | |||||||||||||||||| |||| 
seq2  GAGTAAACCAATGCACAGAGAAAGGAAAAAGAAGCTCTACTGTC-GATCA  49

seq1  G-CATGTGGCAG-CCTTGGGTTAAAGGATGGGAATAGGAGGCCATGGGAG  96
      | |||| ||||| ||||||||||||||||||||||||||||||| |||||
seq2  GACATGAGGCAGCCCTTGGGTTAAAGGATGGGAATAGGAGGCCACGGGAG  99

seq1  ACAGAGAATAGGAAACAACTCACACAAGACACCAGCCTGACATCAGGGCT  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAATAGGAAACAACTCACACAAGACACCAGCCTGACATCAGGGCT  149

seq1  TAGGCTATGTCTCCTGAAGAGGGAATGGAGGTTTGTGACAAAGACATTTG  196
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TAGGCTATGTCTCCTGAAGAGGGAATAGAGGTTTGTGACAAAGACATTTG  199

seq1  CTAATGTTTCATATAGTGTTACTCACCTTACACAATAAATGTATCTAGAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTTTCATATAGTGTTACTCACCTTACACAATAAATGTATCTAGAG  249

seq1  AAATGTGGGAGACAACTTTGGATTGAATTCCTCTTTTCTTCTTCTTCTTC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGGGAGACAACTTTGGATTGAATTCCTCTTTTCTTCTTCTTCTTC  299

seq1  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  349

seq1  CTTCTTCTTCTTCTTCTTCTTCCTTCTTCTTTTTTCCTTCTCCTCCTCCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTTCTTCTTCTTCTTCCTTCTTCTTTTTTCCTTCTCCTCCTCCT  399

seq1  CTTCCTCTTCCTCCTCTTCCTCTTCATTTTCTTCTTTCTTCTCCTTCCTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCTTCCTCCTCTTCCTCTTCATTTTCTTCTTTCTTCTCCTTCCTT  449

seq1  CTCCTTCTCCTCCTCCTTCTTTTTTCTTCTTTCTCCTCCTCCTCCTCCTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCTCCTCCTCCTTCTTTTTTCTTCTTTCTCCTCCTCCTCCTCCTG  499

seq1  CTCTTCTTCCTCCTGCTCTTCTTTTTCCTCTTCCTCCCCTTGTCTTCTTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTTCCTCCTGCTCTTCTTTTTCCTCTTCCTCCCCTTGTCTTCTTG  549

seq1  TCCCCTTGTCTGGGCTCTAACTTGGGAGACTTTTTCTACTAAAGGATTGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTGTCTGGGCTCTAACTTGGGAGACTTTTTCTACTAAAGGATTGC  599

seq1  TTAACATATATAATAGAAGCTTTTCAAATTCTGTTTATTTTCTAAATTAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATATATAATAGAAGCTTTTCAAATTCTGTTTATTTTCTAAATTAG  649

seq1  AATCAGTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA  699

seq1  TATAACCGAGAATTC  711
      |||||||||||||||
seq2  TATAACCGAGAATTC  714

seq1: chr3_149879853_149880941
seq2: B6Ng01-069F21.g_67_1137

seq1  GAATTCTGTTACCTTTGGGATAAGAACCTTTGTCTTCCAGTCTGTCTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTACCTTTGGGATAAGAACCTTTGTCTTCCAGTCTGTCTTAG  50

seq1  GAAATTACTAGTTTTGTCATTTTTAGCTAAGCAGTAGCCTTGCACCTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTACTAGTTTTGTCATTTTTAGCTAAGCAGTAGCCTTGCACCTAGT  100

seq1  GCCTGGACCCATTTCCAGAAGTTAGAATGTCATCATGTAGTGAATCAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGACCCATTTCCAGAAGTTAGAATGTCATCATGTAGTGAATCAAAT  150

seq1  AATGATTCCCAAAAGACATTTGCATTCCACTACTCCCCTGTATGAATACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTCCCAAAAGACATTTGCATTCCACTACTCCCCTGTATGAATACA  200

seq1  GTACCACTCATGAAGGAACAGAGGTGCTCCTGTCATTTCATTAAGGTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCACTCATGAAGGAACAGAGGTGCTCCTGTCATTTCATTAAGGTCCT  250

seq1  TGAAGTAGTAGATACACCTTGTTTATCTGGGGGTCTGCATATATGTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTAGTAGATACACCTTGTTTATCTGGGGGTCTGCATATATGTTTCT  300

seq1  TACAAGAGGAGGTTTTGGTGATTAGAGAGAAAAGAGTTAGCACAGGACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGAGGAGGTTTTGGTGATTAGAGAGAAAAGAGTTAGCACAGGACAA  350

seq1  GCATCAGCAGTATTGACAAGGGCTGGTGAAGGCAGAAAGCTCATGAGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGCAGTATTGACAAGGGCTGGTGAAGGCAGAAAGCTCATGAGCAA  400

seq1  GGAATTTCAGGATGTGAGAAAACTTAAGAGTTATCTCTAATTACCATAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTCAGGATGTGAGAAAACTTAAGAGTTATCTCTAATTACCATAAG  450

seq1  GTTCTGCCAAGGTGGAGTAGATTGTGGTCTACAAGACCTGTGTTAGGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGCCAAGGTGGAGTAGATTGTGGTCTACAAGACCTGTGTTAGGCAT  500

seq1  GGAAGAAGGGCAATTTGCATCATGGGAAGTCACTAGATTGTTGTAATTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAGGGCAATTTGCATCATGGGAAGTCACTAGATTGTTGTAATTCT  550

seq1  CCACATCTTCTGAGAGAAGCAGTGCTTAGCTCATCACCATCCAGTGGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATCTTCTGAGAGAAGCAGTGCTTAGCTCATCACCATCCAGTGGGTC  600

seq1  CATGATGTCTCTCCCCTCCCAAGCAGCAGTGGATTGTGGGAATGATAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGTCTCTCCCCTCCCAAGCAGCAGTGGATTGTGGGAATGATAACA  650

seq1  AGCTTCAGGATATTTGGTTCTGATATACTAAGATTCTTACTCTTATTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCAGGATATTTGGTTCTGATATACTAAGATTCTTACTCTTATTCCA  700

seq1  AAATTATTTCCATAAAAAGAATTTTATTTAAGTTTTTTTAATTGACCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATTTCCATAAAAAGAATTTTATTTAAGTTTTTTTAATTGACCATC  750

seq1  AACCACAACAAAACATGAGTTAAAAACATCATACATAAGAATAGCTAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACAACAAAACATGAGTTAAAAACATCATACATAAGAATAGCTAATT  800

seq1  TCTAAGCTAATTTAAAATTTTCAGAAGTTTCGATTGTCAAGATTTGTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGCTAATTTAAAATTTTCAGAAGTTTCGATTGTCAAGATTTGTTAA  850

seq1  GAATTGTTAAAATTTGTTTTTATGATAGCATAAGTCAGGCTTTCTTTGTG  900
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTG-TAAAATTTGTTTTTATGATAGCATAAGTCAGGCTTTCTTTGTG  899

seq1  TAAATTTTAAATGACAGAAACAAATGAATTATGTGGTGATTAGAAAAAAA  950
      |||| |||||||||||||||| |||||||||||| ||||||||  |||||
seq2  TAAA-TTTAAATGACAGAAAC-AATGAATTATGT-GTGATTAG--AAAAA  944

seq1  AACATTATTTCTAGAGTAAAGCCTTGCAAATATATTTTGATTCTTTACTT  1000
      ||||||||||||||||||||||| ||| |||| |||||||||| |||| |
seq2  AACATTATTTCTAGAGTAAAGCC-TGC-AATAAATTTTGATTC-TTAC-T  990

seq1  GAATATTTTTACCTAAATATGCTCCCTACCTTTCCCTTTATCTAAGATGA  1050
      | ||||||||| ||||||||||| |||||  || | |       ||||||
seq2  GGATATTTTTA-CTAAATATGCT-CCTAC--TTGCGT-----AGAGATGA  1031

seq1  GATGACTTGCATATATATATATATATAT-ATATATATATA  1089
      |||||||||||   |||||||||||||| |||||||||||
seq2  GATGACTTGCAATGATATATATATATATAATATATATATA  1071