BAC Information

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BAC

Clone NameB6Ng01-072M03
Chromosome3 (Build37)
Map Location 66,209,734 - 66,210,879
singlet/doubletsinglet
Overlap genenone
Upstream geneEG667093, LOC100041083, 4931440P22Rik, Tiparp, LOC545530, LOC100040978, EG624866, Ccnl1, LOC625048, Veph1, Tpi-rs2, Ptx3
Downstream geneLOC625115, Shox2, Rsrc1, Mlf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072M03.bB6Ng01-072M03.g
ACCDH890082DH890083
length1,136321
definitionDH890082|Mus musculus domesticus DNA, BAC clone: B6Ng01-072M03, 5' end.DH890083|Mus musculus domesticus DNA, BAC clone: B6Ng01-072M03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgcttgtgggtgggcctggctggctgcccagtactatgctga
atgggttgtgttttctgcctaggtgttgggtggcagcttgccagtcctcg
gaaacttccaggtgaatcacgatgagaaaggaaccacaaacatggctgtt
tctaacccgccttcccacctctctgcacatgtgcgaacatgaaattttct
gataagatatttctcatgacaaatgtccactctcgcttctctgaactctg
aggttgagccctggttgtgttgcttcaagtaaatcaatgaaggtttgggg
gcacagagttctctgttctgtttttattaaaaacacatgccactgtcctg
cacagagtcacacacgtctaataagaaaggaactaaactaatgagttttg
ttttgtttgtttgttcgataacatttattatgactgtctctgaaaacaaa
ttccctaagagtcatagggctttctgctgccttctggggtcaaatacaga
gaagaggcatcagattccctgatgaggccctcaaagatttagcggctacc
atccgttcctcacgaagtcttcactgtagctcaggtgtggtgaggggcag
ctcctggcatcttgggaacccattttcttgattagcggttttcttttcat
ggtctccattttcttggattcatcagtggaagcaaaatttagggactaaa
acaaaaatcaacactgtgactgccctacactcgtcttttctgtctgtaag
gcggtcccagatcccatcactatacagatgaagaaattagaaccgggaag
gtggctgactaatagaaagttcccaccagggtctccagggatagtcttcc
cagccctgtctcatggctttgccaatgctatgctacacagcatcacagct
ccgttctttggttgtttcaaacagaaataaggaggattgtaggatggggt
cttgggtgatcacctggctctcctatgcttagagctaggactcctgtatt
gaatgaaaccttttgtttctaagggaaataactagtacttgggaatgact
aagatgtcgtcatggtcgttgggcgtttataattgatggcctcaactggt
gattatgcaaccgaagttactttccactattgcgga

acaccagttggggttacatacacaagatctgtataagaccaaggcaagca
aactctcacacagattgttagaggacctccaggccttgtctcatccctga
ggaattgttggcaattgatagttcctgggaggagagattcattattcttt
tgaggatgcatgcattgataggattcccatgctactatgcatggcccatg
gatgtgtcctgatgtcacatatggacagtgtgtaacaaatattaatttaa
aaaagatatgaagatggaaggaaaatgtgttgaggggagtatagaataaa
ttaattgggagtgggatggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_66209734_66210879
seq2: B6Ng01-072M03.b_43_1178

seq1  GAATTCTCTGCTTGTGGGTGGGCCTGGCTGGCTGCCCAGTACTATGCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCTTGTGGGTGGGCCTGGCTGGCTGCCCAGTACTATGCTGA  50

seq1  ATGGGTTGTGTTTTCTGCCTAGGTGTTGGGTGGCAGCTTGCCAGTCCTCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTTGTGTTTTCTGCCTAGGTGTTGGGTGGCAGCTTGCCAGTCCTCG  100

seq1  GAAACTTCCAGGTGAATCACGATGAGAAAGGAACCACAAACATGGCTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTCCAGGTGAATCACGATGAGAAAGGAACCACAAACATGGCTGTT  150

seq1  TCTAACCCGCCTTCCCACCTCTCTGCACATGTGCGAACATGAAATTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACCCGCCTTCCCACCTCTCTGCACATGTGCGAACATGAAATTTTCT  200

seq1  GATAAGATATTTCTCATGACAAATGTCCACTCTCGCTTCTCTGAACTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGATATTTCTCATGACAAATGTCCACTCTCGCTTCTCTGAACTCTG  250

seq1  AGGTTGAGCCCTGGTTGTGTTGCTTCAAGTAAATCAATGAAGGTTTGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGAGCCCTGGTTGTGTTGCTTCAAGTAAATCAATGAAGGTTTGGGG  300

seq1  GCACAGAGTTCTCTGTTCTGTTTTTATTAAAAACACATGCCACTGTCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGAGTTCTCTGTTCTGTTTTTATTAAAAACACATGCCACTGTCCTG  350

seq1  CACAGAGTCACACACGTCTAATAAGAAAGGAACTAAACTAATGAGTTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGTCACACACGTCTAATAAGAAAGGAACTAAACTAATGAGTTTTG  400

seq1  TTTTGTTTGTTTGTTCGATAACATTTATTATGACTGTCTCTGAAAACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTGTTTGTTCGATAACATTTATTATGACTGTCTCTGAAAACAAA  450

seq1  TTCCCTAAGAGTCATAGGGCTTTCTGCTGCCTTCTGGGGTCAAATACAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTAAGAGTCATAGGGCTTTCTGCTGCCTTCTGGGGTCAAATACAGA  500

seq1  GAAGAGGCATCAGATTCCCTGATGAGGCCCTCAAAGATTTAGCGGCTACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGCATCAGATTCCCTGATGAGGCCCTCAAAGATTTAGCGGCTACC  550

seq1  ATCCGTTCCTCACGAAGTCTTCACTGTAGCTCAGGTGTGGTGAGGGGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGTTCCTCACGAAGTCTTCACTGTAGCTCAGGTGTGGTGAGGGGCAG  600

seq1  CTCCTGGCATCTTGGGAACCCATTTTCTTGATTAGCGGTTTTCTTTTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGCATCTTGGGAACCCATTTTCTTGATTAGCGGTTTTCTTTTCAT  650

seq1  GGTCTCCATTTTCTTGGATTCATCAGTGGAAGCAAAATTTAGGGACTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCCATTTTCTTGGATTCATCAGTGGAAGCAAAATTTAGGGACTAAA  700

seq1  ACAAAAATCAACACTGTGACTGCCCTACACTCGTCTTTTCTGTCTGTAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATCAACACTGTGACTGCCCTACACTCGTCTTTTCTGTCTGTAAG  750

seq1  GCGGTCCCAGATCCCATCACTATACAGATGAAGAAATTAGAACCGGGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTCCCAGATCCCATCACTATACAGATGAAGAAATTAGAACCGGGAAG  800

seq1  GTGGCTGACTAATAGAAGGTTCCCACCAGGGTCTCCAGGGATAGTCTTCC  850
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTGGCTGACTAATAGAAAGTTCCCACCAGGGTCTCCAGGGATAGTCTTCC  850

seq1  CAGCCCTGTCTCATGGCTTTGCCAATGCTATGCTACACAGCATCACAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTGTCTCATGGCTTTGCCAATGCTATGCTACACAGCATCACAGCT  900

seq1  CCGTTCTTTGGTTGTTTCAAACAGAAATAAGGGAGGATTGTAGGAAGGGG  950
      |||||||||||||||||||||||||||||| ||||||||||||| | |||
seq2  CCGTTCTTTGGTTGTTTCAAACAGAAATAA-GGAGGATTGTAGG-ATGGG  948

seq1  GTCTTGGGTGATCA-CTGGCTCTCCTATGCTTAGAGCTAGGAACTCTGTA  999
      |||||||||||||| |||||||||||||||||||||||||||   |||||
seq2  GTCTTGGGTGATCACCTGGCTCTCCTATGCTTAGAGCTAGGACTCCTGTA  998

seq1  TTGAATGAAACCTTTTGTTTCTAAGGGGAAATTAACTAGTACTTGGGAAT  1049
      |||||||||||||||||||||||||||  || ||||||||||||||||||
seq2  TTGAATGAAACCTTTTGTTTCTAAGGG--AAATAACTAGTACTTGGGAAT  1046

seq1  GACTACGATGGTCGTCATGGTCGTTTGGGCGTTTATAATTGAATGCCTCA  1099
      ||||| ||| ||||||||||||| ||||||||||||||||||  ||||||
seq2  GACTAAGAT-GTCGTCATGGTCG-TTGGGCGTTTATAATTGATGGCCTCA  1094

seq1  GACTGGTGATTTATTGCAAACAGAAGTTTACTTCCAACTATTGCGGA  1146
       ||||||||||   ||| ||| |||| |||||| | |||||||||||
seq2  -ACTGGTGATT--ATGC-AACCGAAG-TTACTTTCCACTATTGCGGA  1136


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