BAC Information

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BAC

Clone NameB6Ng01-073I18
Chromosome3 (Build37)2 (Build37)
Map Location 41,059,021 - 41,059,540104,627,759 - 104,628,455
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073I18.bB6Ng01-073I18.g
ACCDH890642DH890643
length725696
definitionDH890642|Mus musculus domesticus DNA, BAC clone: B6Ng01-073I18, 5' end.DH890643|Mus musculus domesticus DNA, BAC clone: B6Ng01-073I18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(41,059,021 - 41,059,540)(104,627,759 - 104,628,455)
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggagtctaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacagtatcttttgccttacagaagctttgcaatttta
ttaggtcccatttgtcaattctcaatcttacagcacaagccattgctgtt
ctattcaggaattttcccactgtgcccatatctttgaggcttttccccac
tttctcctctataagtttcactgtctctggttttatgtggagttccttga
tccacttagatttgaccttagtacaaggagataggaatggatcaattcgc
attcttctacatgataactgccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtccctataccagtaccatgcagtttttatcacaactgc
tctgtagtaaagctttaggtcaggcatggtgattccaccataggttcttt
tatccttgagaaagagtttttgctatcctactaggttttttttgttattc
cagatgaatttgcagattgctcttt
gaattcacatgcctgacatttaatgactgctgataatgagacttagaatc
actactttcaatatcttgcatggtttcatttgcagctgacttggaaaagt
cagaaggtgtaaccccacaagctgctgctgtagctgctaagatgtcatct
acatttgataaaatatttctttcatcactgagaagcattgcctctgagaa
gcatattgatccaagagaaacaaactgattctttgagtcatgtggattgg
cttcactgaaggggccctttgttgttagctgttgcaatggttttgaaggt
tcagggaggtctagtttcataatatcagaattgtgaggatggagctgctg
ttgaggatgttcaccgttgctctggatgatatgaccatccatctgtagga
aaggatggactatctgttgcggactctgaacacgctgtacttgcaaggat
gcctttgcttgtcccaggctagcctggagaattccagcctgttgaagaat
ctgtaagtcacaggcagagtctaaaaggactgatgtatgagtaagagcct
gatgactctgccctaaagcaggatttggaatctgtatctgagatgaggca
ctcattatttgatcatgctgtgctgaaccttctcttcatgcatcttgtgc
atgagagaatgctgttggttgaggtctttagtattcaaccttacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059021_41059540
seq2: B6Ng01-073I18.b_230_755 (reverse)

seq1  AAAGAGCAATCTGCAAATTCATCTGGAATAAC--AAAAAACC---TAGGA  45
      ||||||||||||||||||||||||||||||||  ||||||||   |||||
seq2  AAAGAGCAATCTGCAAATTCATCTGGAATAACAAAAAAAACCTAGTAGGA  50

seq1  TAGCAAAAACTC-TTCTCAAGGATAACAGAACCTCTGGTGGAATCACCAT  94
      |||||||||||| ||||||||||||| ||||||| |||||||||||||||
seq2  TAGCAAAAACTCTTTCTCAAGGATAAAAGAACCTATGGTGGAATCACCAT  100

seq1  GCCTGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGT  144
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GCCTGACCTAAAGCTTTACTACAGAGCAGTTGTGATAAAAACTGCATGGT  150

seq1  ACTGGTATAGTGACAGACAAGCAGACCAATGGAATAGAATTGAAGACTCA  194
      |||||||||| |||||||||| ||||||||||||||||||||||||| ||
seq2  ACTGGTATAGGGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCA  200

seq1  GAAACGAATCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAA  244
      |||| ||| |||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAA  250

seq1  AACCATCCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACA  300

seq1  ACTGGTTGTTATCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCT  344
      |||||  ||||||||||||||||||||||||||||||| |||||||||||
seq2  ACTGGCAGTTATCATGTAGAAGAATGCGAATTGATCCATTCCTATCTCCT  350

seq1  TGTACTAAGGTCAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGA  394
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTCCACATAAAACCAGA  400

seq1  GACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGG  444
      |||| ||||||||||||||||||||||||||||||||||  |||||||||
seq2  GACAGTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTCAAAGATATGG  450

seq1  TCACAGGGGAAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGA  494
       ||||| || |||||||||| |||||||||||||||||||||||||||||
seq2  GCACAGTGGGAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGA  500

seq1  TTGAGAATAGACAAATGGGACCTCAT  520
      |||||||| |||||||||||||| ||
seq2  TTGAGAATTGACAAATGGGACCTAAT  526

seq1: chr2_104627759_104628455
seq2: B6Ng01-073I18.g_69_764

seq1  GAATTCACATGCCTGACATTTAATGACTGCTGATAATGAGACTTAGAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATGCCTGACATTTAATGACTGCTGATAATGAGACTTAGAATC  50

seq1  ACTACTTTCAATATCTTGCATGGTTTCATTTGCAGCTGACTTGGAAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTTCAATATCTTGCATGGTTTCATTTGCAGCTGACTTGGAAAAGT  100

seq1  CAGAAGGTGTAACCCCACAAGCTGCTGCTGTAGCTGCTAAGATGTCATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGTGTAACCCCACAAGCTGCTGCTGTAGCTGCTAAGATGTCATCT  150

seq1  ACATTTGATAAAATATTTCTTTCATCACTGAGAAGCATTGCCTCTGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGATAAAATATTTCTTTCATCACTGAGAAGCATTGCCTCTGAGAA  200

seq1  GCATATTGATCCAAGAGAAACAAACTGATTCTTTGAGTCATGTGGATTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTGATCCAAGAGAAACAAACTGATTCTTTGAGTCATGTGGATTGG  250

seq1  CTTCACTGAAGGGGCCCTTTGTTGTTAGCTGTTGCAATGGTTTTGAAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTGAAGGGGCCCTTTGTTGTTAGCTGTTGCAATGGTTTTGAAGGT  300

seq1  TCAGGGAGGTCTAGTTTCATAATATCAGAATTGTGAGGATGGAGCTGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGAGGTCTAGTTTCATAATATCAGAATTGTGAGGATGGAGCTGCTG  350

seq1  TTGAGGATGTTCACCGTTGCTCTGGATGATATGACCATCCATCTGTAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGATGTTCACCGTTGCTCTGGATGATATGACCATCCATCTGTAGGA  400

seq1  AAGGATGGACTATCTGTTGCGGACTCTGAACACGCTGTACTTGCAAGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATGGACTATCTGTTGCGGACTCTGAACACGCTGTACTTGCAAGGAT  450

seq1  GCCTTTGCTTGTCCCAGGCTAGCCTGGAGAATTCCAGCCTGTTGAAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTGCTTGTCCCAGGCTAGCCTGGAGAATTCCAGCCTGTTGAAGAAT  500

seq1  CTGTAAGTCACAGGCAGAGTCTAAAAGGACTGATGTATGAGGAAGAGCCT  550
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTGTAAGTCACAGGCAGAGTCTAAAAGGACTGATGTATGAGTAAGAGCCT  550

seq1  GATGACTCTGCCCTAAAGCAGGATTTGGAATCTGTATCTGAGATGAGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACTCTGCCCTAAAGCAGGATTTGGAATCTGTATCTGAGATGAGGCA  600

seq1  CTCATTATTTGATCATGCTGTTGCTGAACCTTCGCTTCATGCATCTTGTG  650
      |||||||||||||||||||| |||||||||||| ||||||||||||||||
seq2  CTCATTATTTGATCATGCTG-TGCTGAACCTTCTCTTCATGCATCTTGTG  649

seq1  CATGAGAGAATGCTGCTGGTTGAGGTCTTTAGTATTCAACCTTACCT  697
      ||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CATGAGAGAATGCTGTTGGTTGAGGTCTTTAGTATTCAACCTTACCT  696