BAC Information

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BAC

Clone NameB6Ng01-073L13
Chromosome3 (Build37)7 (Build37)
Map Location 41,059,227 - 41,059,73712,996,798 - 12,997,271
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073L13.bB6Ng01-073L13.g
ACCDH890764DH890765
length1,001468
definitionDH890764|Mus musculus domesticus DNA, BAC clone: B6Ng01-073L13, 5' end.DH890765|Mus musculus domesticus DNA, BAC clone: B6Ng01-073L13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(41,059,227 - 41,059,737)(12,996,798 - 12,997,271)
sequence
gaattctttgtttagctctgagccccattttttaacggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtcac
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggcgtttcg
ttaggtcccatttgtcaattctcgatcttacagtacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtgaagttacttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtggggttcatttctgggtcttcaattctgttccattggt
ctacttgtctgtctctataccagtaccttgcagttttttcatcacaattg
ctctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctt
ttatccttgagaagagtttttgctatcctaggttttttgttatttcagat
gaatttgcaaattgctccttctaattcgttgaagatttgagttggaattt
tgatggggattgcattgaatctgtagattgctatttgcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttcttcagagacttgaagtttttatcat
acagatctttcacttccttagttagagtcacgccgagatattttgtatca
tttgtgactactgagacggtgttgtttccctaatttctttctcagcctgt
t
tgtttccaacatactgattgaattgctgcaaatggcttttggaatacagg
tattaaatcaaacatagtgattaggagtggtatgtattaaatattagttt
ctaaaacagttgtgatataatttattagacctgtgtacctttaaaacatt
tttttgatgtctttacatgcctatctcatcaaagcaagtgtccttcttgc
tcttttaatatagttttttcagtgcatacaattactgagaaaacgactaa
ttctttaaaaataattaaaagttggataattccttacttatatacagtgc
agtatgtacacatcctcctaactgtcattaccttctcttattcttccccc
tcttgctgatctccttcatcccagctagtcctcctcctggtttggagtgt
gtatatgccatgcatgcatgtgcatgcgcgtgtgtgtgtatgtgtgtgtg
tgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059227_41059737
seq2: B6Ng01-073L13.b_51_562 (reverse)

seq1  CACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTG  50

seq1  GAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTAT  100
      ||| |||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTAT  100

seq1  CATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAGGTC  150
      ||||||||||||||||||| ||||||  | ||||||||||||||||||||
seq2  CATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTC  150

seq1  AAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACTGAAACT  200
      |||||||||||||||||| |||  ||||||||||||||||||||||||||
seq2  AAATCTAAGTGGATCAAGTAACTTCACATAAAACCAGAGACACTGAAACT  200

seq1  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGGAAA  250
      ||||||||||||||| |||||||||||||||||||||| |||||||||||
seq2  TATAGAGGAGAAAGTAGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAA  250

seq1  AATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATAGAC  300
      |||||||| | |||||||||||||||||| ||||||||| |||||| |||
seq2  AATTCCTGAACAGAACAGCAATGGCTTGTACTGTAAGATCGAGAATTGAC  300

seq1  AAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACACCGT  350
      ||||||||||| | |||||  ||||| |||||||||||||||||||||||
seq2  AAATGGGACCTAACGAAACGCCAAAGTTTCTGCAAGGCAAAAGACACCGT  350

seq1  CAATAAGACAAAAAG-GCACCAACAGATTGGGAAAGGATCTTTACCTATC  399
      |||||||||||||||  |||||||||||||||||||||||||||||||||
seq2  CAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATC  400

seq1  CTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACTCAAGAAG  449
      |||||||||||||| ||||||||||||| |||||| ||||||||||||||
seq2  CTAAATCAGATAGGTGACTAATATCCAACATATATAAAGAACTCAAGAAG  450

seq1  GTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCT  499
      ||||| | ||||||||||||||||||| ||||||||||||||||||||||
seq2  GTGGACTTCAGAAAATCAAATAACCCCGTTAAAAAATGGGGCTCAGAGCT  500

seq1  AAACAAAGAATT  511
      ||||||||||||
seq2  AAACAAAGAATT  512

seq1: chr7_12996798_12997271
seq2: B6Ng01-073L13.g_68_541 (reverse)

seq1  CACACACACACACACACACACACACACATACACACACACGCGCATGCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACATACACACACACGCGCATGCACA  50

seq1  TGCATGCATGGCATATACACACTCCAAACCAGGAGGAGGACTAGCTGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCATGGCATATACACACTCCAAACCAGGAGGAGGACTAGCTGGGA  100

seq1  TGAAGGAGATCAGCAAGAGGGGGAAGAATAAGAGAAGGTAATGACAGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGAGATCAGCAAGAGGGGGAAGAATAAGAGAAGGTAATGACAGTTA  150

seq1  GGAGGATGTGTACATACTGCACTGTATATAAGTAAGGAATTATCCAACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGATGTGTACATACTGCACTGTATATAAGTAAGGAATTATCCAACTT  200

seq1  TTAATTATTTTTAAAGAATTAGTCGTTTTCTCAGTAATTGTATGCACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTATTTTTAAAGAATTAGTCGTTTTCTCAGTAATTGTATGCACTGA  250

seq1  AAAAACTATATTAAAAGAGCAAGAAGGACACTTGCTTTGATGAGATAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTATATTAAAAGAGCAAGAAGGACACTTGCTTTGATGAGATAGGC  300

seq1  ATGTAAAGACATCAAAAAAATGTTTTAAAGGTACACAGGTCTAATAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAAGACATCAAAAAAATGTTTTAAAGGTACACAGGTCTAATAAATT  350

seq1  ATATCACAACTGTTTTAGAAACTAATATTTAATACATACCACTCCTAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCACAACTGTTTTAGAAACTAATATTTAATACATACCACTCCTAATC  400

seq1  ACTATGTTTGATTTAATACCTGTATTCCAAAAGCCATTTGCAGCAATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGTTTGATTTAATACCTGTATTCCAAAAGCCATTTGCAGCAATTCA  450

seq1  ATCAGTATGTTGGAAACAGAATTC  474
      ||||||||||||||||||||||||
seq2  ATCAGTATGTTGGAAACAGAATTC  474