BAC Information

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BAC

Clone NameB6Ng01-074A20
Chromosome3 (Build37)
Map Location 132,378,591 - 132,538,780
singlet/doubletdoublet
Overlap geneA630047E20Rik, LOC668858
Upstream geneOlfr375-ps1, Dkk2, LOC100039018, EG433653, LOC668857, Scye1
Downstream geneNpnt, Gstcd, Ints12, 9130221D24Rik, Ppa2, E130014J05Rik, EG620205, LOC100039168
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074A20.bB6Ng01-074A20.g
ACCDH891007DH891008
length1,0831,043
definitionDH891007|Mus musculus domesticus DNA, BAC clone: B6Ng01-074A20, 5' end.DH891008|Mus musculus domesticus DNA, BAC clone: B6Ng01-074A20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,537,697 - 132,538,780)(132,378,591 - 132,379,644)
sequence
gaattctttataaaacgtcagaaaaatgtgtggacgtttcagggttatat
ttgaaaacaaaataacgaagacaaagcaacggtggccttattcttagaag
tgggttattttcaagctgactacggtgcggaggggaggtttgcactggag
gttagcggggctcgggaggtaggtgggccccttcctggggtacttctcta
tactctgcagaaagcacgccagtgggataaacaaacccacagtcagtaaa
cctggagttggtacttcagcctccaaacaacgctctaggcatgattctca
gccttcctaatgctgcaaccctttaaatacggttcctcgtgttgtgctga
ccccccacccccaccccaaaattatgcccttgctattttacagttgtaat
tttgctactgttatgaatcataatataaattttctggagatagcagtttg
ccaaaggggtctcacaggttgacccacaggtttgagaaccactgcgctaa
atggctgcatgaaccctatcaacctttgtaactatttcctccagagttgg
gaaagagctgagctatcccaaccacagaggtacgagagaaatgggtctct
ggagactcagacaaaccgcttccctcattcctctgcatgccacctctttc
actgccctgggccagtaggactgctttgcagtattgctactgaactgctc
caaaggccttcttgctctgtgaaggcttgagcccagagaaaggagaaaac
taaccctttctacttaatcatattagttgctacaatggaagaaaagtaat
gtactcttgagtgttggttgttaagaagcccatgatttgttttaggggat
gagaaatgtgtaggttttatatttgtgttatgcttcattgtttatgactg
tgtgtgtgtgtatctgtctgtctgtctgtctgtctgtctgtctgtctgtc
tggtgtctgactgagtcaacatgccatagcccagcattgaaagtcagaga
gttacttgctaaggatctgttcttttcaatatgtagttcctgggattgga
accttggggctttagcctttggcagaagatgtg
gaattcccaaaactactgatcatgtgccaagtgaaaaaccattgccttct
ggccccaaatcagatgtatggtctcttgggataattttatttgagctttg
tgtggtatgtataaagaaatattaaactaataaaataatttgtgtgatca
ttagcatttgctttttagagaggaagtttacacagtaataaaatattttg
ttgtacaaattgactagatataaatagactattttatcagagctcatagt
tatatttcagtctataacgtttgaagggtacagtgttgaacgaattcaat
aaaaggaaagtttcgtttttctatgagttttatgtcacttggttatgtcc
ttagtttgggcatccagtgcaagtatgacaggctacatttaagtctaaat
agtctgtataaatcaacacttagaattttatagacaatattaagatacaa
gtgaatgtcataccagcaactagcaaatggaactttttgtgtagtaggaa
tatttttttaaaatgagtggaaagctgtatcaaaatcatactggaaggaa
gtgtttactctgtcactaagaatgtggcagagccatgctgccatgagacg
ttcccactgctgcagtgtgtgggagagggctgtggtactgatgagaaaat
gagaaaaaaacataagcagtaatatccacagtaagaaagaaacagctaat
agaggaattatagcattaaaactttaaaataaaaccacattttctaaaac
ataagggtaattaagctcattaagcaattatataaactatcaagaaaaca
aagtttttaatgaaatatatgcaattattaaaacaaagaatgtaataaat
tctaggaaactggaaaaactagaagtagaaatcctcccaaaagcatttgt
acgcaggataaagagattgcaaatattaaagtaaaaggaaagagagtacc
cagatgttctacatctgtatatggaaatatcaaagtagaaacaaagccct
cttttggaagcacaggtcttttaaatggaaaaataaaactcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_132537697_132538780
seq2: B6Ng01-074A20.b_44_1126 (reverse)

seq1  CACATCTTCTGCCAAAGCCTAAAGCCCCAAG--TTCAATCCCAGGAACTA  48
      ||||||||||||||||| |||||||||||||  | |||||||||||||||
seq2  CACATCTTCTGCCAAAGGCTAAAGCCCCAAGGTTCCAATCCCAGGAACTA  50

seq1  CATTATGGAAAGAGAACAGATTC-TAGCAAGTTACTCTCTGACTTTCAAA  97
      || ||| |||| ||||||||| | |||||||| |||||||||||||| ||
seq2  CA-TATTGAAA-AGAACAGATCCTTAGCAAGTAACTCTCTGACTTTC-AA  97

seq1  TGCT-GGCTATGGCATGTTGACTCAGACAGACACACAGACAGACAGACAG  146
      |||| ||||||||||||||||||||| ||||||| |||||||||||||||
seq2  TGCTGGGCTATGGCATGTTGACTCAGTCAGACAC-CAGACAGACAGACAG  146

seq1  ACAGACAGACAGACAGACAGACAGATACACACACACACAAGTCATAAACA  196
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACAGACAGACAGACAGACAGACAGATACACACACACAC-AGTCATAAACA  195

seq1  ATGAAGCATAACACAAATATAAAACCTACACATTTCTCATCCCCTAAAAC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCATAACACAAATATAAAACCTACACATTTCTCATCCCCTAAAAC  245

seq1  AAATCATGGGCTTCTTAACAACCAACACTCAAGAGTACATTACTTTTCTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATGGGCTTCTTAACAACCAACACTCAAGAGTACATTACTTTTCTT  295

seq1  CCATTGTAGCAACTAATATGATTAAGTAGAAAGGGTTAGTTTTCTCCTTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTAGCAACTAATATGATTAAGTAGAAAGGGTTAGTTTTCTCCTTT  345

seq1  CTCTGGGCTCAAGCCTTCACAGAGCAAGAAGGCCTTTGGAGCAGTTCAGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGCTCAAGCCTTCACAGAGCAAGAAGGCCTTTGGAGCAGTTCAGT  395

seq1  AGCAATACTGCAAAGCAGTCCTACTGGCCCAGGGCAGTGAAAGAGGTGGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATACTGCAAAGCAGTCCTACTGGCCCAGGGCAGTGAAAGAGGTGGC  445

seq1  ATGCAGAGGAATGAGGGAAGCGGTTTGTCTGAGTCTCCAGAGACCCATTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAGGAATGAGGGAAGCGGTTTGTCTGAGTCTCCAGAGACCCATTT  495

seq1  CTCTCGTACCTCTGTGGTTGGGATAGCTCAGCTCTTTCCCAACTCTGGAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCGTACCTCTGTGGTTGGGATAGCTCAGCTCTTTCCCAACTCTGGAG  545

seq1  GAAATAGTTACAAAGGTTGATAGGGTTCATGCAGCCATTTAGCGCAGTGG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGTTACAAAGGTTGATAGGGTTCATGCAGCCATTTAGCGCAGTGG  595

seq1  TTCTCAAACCTGTGGGTCAACCTGTGAGACCCCTTTGGCAAACTGCTATC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAACCTGTGGGTCAACCTGTGAGACCCCTTTGGCAAACTGCTATC  645

seq1  TCCAGAAAATTTATATTATGATTCATAACAGTAGCAAAATTACAACTGTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAAATTTATATTATGATTCATAACAGTAGCAAAATTACAACTGTA  695

seq1  AAATAGCAAGGGCATAATTTTGGGGTGGGGGTGGGGGGTCAGCACAACAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCAAGGGCATAATTTTGGGGTGGGGGTGGGGGGTCAGCACAACAC  745

seq1  GAGGAACCGTATTTAAAGGGTTGCAGCATTAGGAAGGCTGAGAATCATGC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACCGTATTTAAAGGGTTGCAGCATTAGGAAGGCTGAGAATCATGC  795

seq1  CTAGAGCGTTGTTTGGAGGCTGAAGTACCAACTCCAGGTTTACTGACTGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGCGTTGTTTGGAGGCTGAAGTACCAACTCCAGGTTTACTGACTGT  845

seq1  GGGTTTGTTTATCCCACTGGCGTGCTTTCTGCAGAGTATAGAGAAGTACC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGTTTATCCCACTGGCGTGCTTTCTGCAGAGTATAGAGAAGTACC  895

seq1  CCAGGAAGGGGCCCACCTACCTCCCGAGCCCCGCTAACCTCCAGTGCAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAGGGGCCCACCTACCTCCCGAGCCCCGCTAACCTCCAGTGCAAA  945

seq1  CCTCCCCTCCGCACCGTAGTCAGCTTGAAAATAACCCACTTCTAAGAATA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCTCCGCACCGTAGTCAGCTTGAAAATAACCCACTTCTAAGAATA  995

seq1  AGGCCACCGTTGCTTTGTCTTCGTTATTTTGTTTTCAAATATAACCCTGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCACCGTTGCTTTGTCTTCGTTATTTTGTTTTCAAATATAACCCTGA  1045

seq1  AACGTCCACACATTTTTCTGACGTTTTATAAAGAATTC  1084
      ||||||||||||||||||||||||||||||||||||||
seq2  AACGTCCACACATTTTTCTGACGTTTTATAAAGAATTC  1083

seq1: chr3_132378591_132379644
seq2: B6Ng01-074A20.g_67_1109

seq1  GAATTCCCAAAACTACTGATCATGTGCCAAGTGAAAAACCATTGCCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAAACTACTGATCATGTGCCAAGTGAAAAACCATTGCCTTCT  50

seq1  GGCCCCAAATCAGATGTATGGTCTCTTGGGATAATTTTATTTGAGCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCAAATCAGATGTATGGTCTCTTGGGATAATTTTATTTGAGCTTTG  100

seq1  TGTGGTATGTATAAAGAAATATTAAACTAATAAAATAATTTGTGTGATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTATGTATAAAGAAATATTAAACTAATAAAATAATTTGTGTGATCA  150

seq1  TTAGCATTTGCTTTTTAGAGAGGAAGTTTACACAGTAATAAAATATTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATTTGCTTTTTAGAGAGGAAGTTTACACAGTAATAAAATATTTTG  200

seq1  TTGTACAAATTGACTAGATATAAATAGACTATTTTATCAGAGCTCATAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACAAATTGACTAGATATAAATAGACTATTTTATCAGAGCTCATAGT  250

seq1  TATATTTCAGTCTATAACGTTTGAAGGGTACAGTGTTGAACGAATTCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTCAGTCTATAACGTTTGAAGGGTACAGTGTTGAACGAATTCAAT  300

seq1  AAAAGGAAAGTTTCGTTTTTCTATGAGTTTTATGTCACTTGGTTATGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAAAGTTTCGTTTTTCTATGAGTTTTATGTCACTTGGTTATGTCC  350

seq1  TTAGTTTGGGCATCCAGTGCAAGTATGACAGGCTACATTTAAGTCTAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTGGGCATCCAGTGCAAGTATGACAGGCTACATTTAAGTCTAAAT  400

seq1  AGTCTGTATAAATCAACACTTAGAATTTTATAGACAATATTAAGATACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTATAAATCAACACTTAGAATTTTATAGACAATATTAAGATACAA  450

seq1  GTGAATGTCATACCAGCAACTAGCAAATGGAACTTTTTGTGTAGTAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGTCATACCAGCAACTAGCAAATGGAACTTTTTGTGTAGTAGGAA  500

seq1  TATTTTTTTAAAATGAGTGGAAAGCTGTATCAAAATCATACTGGAAGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTAAAATGAGTGGAAAGCTGTATCAAAATCATACTGGAAGGAA  550

seq1  GTGTTTACTCTGTCACTAAGAATGTGGCAGAGCCATGCTGCCATGAGACG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTACTCTGTCACTAAGAATGTGGCAGAGCCATGCTGCCATGAGACG  600

seq1  TTCCCACTGCTGCAGTGTGTGGGAGAGGGCTGTGGTACTGATGAGAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACTGCTGCAGTGTGTGGGAGAGGGCTGTGGTACTGATGAGAAAAT  650

seq1  GAGAAAAAAACATAAGCAGTAATATCCACAGTAAGAAAGAAACAGCTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAAAACATAAGCAGTAATATCCACAGTAAGAAAGAAACAGCTAAT  700

seq1  AGAGGAATTATAGCATTAAAACTTTAAAATAAAACCACATTTTCTAAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAATTATAGCATTAAAACTTTAAAATAAAACCACATTTTCTAAAAC  750

seq1  ATAA-GGTAATTAAGCTCATTAAGCAATTATATAAACTATCAAGAAAACA  799
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGGTAATTAAGCTCATTAAGCAATTATATAAACTATCAAGAAAACA  800

seq1  AAG-TTTTAATGAAATATATGCAATTATTAAAACAAAGAATGTAATAAAT  848
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTTAATGAAATATATGCAATTATTAAAACAAAGAATGTAATAAAT  850

seq1  TCTAGGAAACTGGAAAAACTAGAAGTAGAAATCCTCCCAAAAGCATTTGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGAAACTGGAAAAACTAGAAGTAGAAATCCTCCCAAAAGCATTTGT  900

seq1  ACGCAAGGATAAAGAGATTGCAAATATTAAAGTTAAAAGGAAAGGAAGAA  948
      |||| ||||||||||||||||||||||||||| |||||||||||  || |
seq2  ACGC-AGGATAAAGAGATTGCAAATATTAAAG-TAAAAGGAAAG--AG-A  945

seq1  GTACCCAGATGTTCTAACATCTGTATAATGGAAATATCAAAAGTAGAAAA  998
      ||||||||||||||| |||||||||| ||||||||||| ||||||| |||
seq2  GTACCCAGATGTTCT-ACATCTGTAT-ATGGAAATATC-AAAGTAG-AAA  991

seq1  CAAAGCCCTCCTTTTGGAAGCACAGGGTCTTTTAAATGGAAAAAATAAAA  1048
      ||||||||| |||||||||||||| |||||||||||||||||||   |||
seq2  CAAAGCCCT-CTTTTGGAAGCACA-GGTCTTTTAAATGGAAAAA--TAAA  1037

seq1  ACTCAT  1054
      ||||||
seq2  ACTCAT  1043