BAC Information

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BAC

Clone NameB6Ng01-074L04
Chromosome3 (Build37)
Map Location 130,620,609 - 130,621,521
singlet/doubletsinglet
Overlap genenone
Upstream geneCcdc109b, Sec24b, EG668844, EG668845, Col25a1, Agxt2l1, 2310008M10Rik, Rpl34, LOC546811
Downstream geneLOC545568, Lef1, 6720418B01Rik, Hadh, Cyp2u1, Sgms2, LOC100043443, Papss1, Olfr375-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074L04.bB6Ng01-074L04.g
ACCDH891469DH891470
length1,0651,134
definitionDH891469|Mus musculus domesticus DNA, BAC clone: B6Ng01-074L04, 5' end.DH891470|Mus musculus domesticus DNA, BAC clone: B6Ng01-074L04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcatagtctttttcagttcacaatgagtacagagactggtgtg
agtcggtcctactgcttccaaacctttctaagagcacagaggccagttta
agtaattaattattcaggtataacataccaaggctatacaacaaaaatag
agatcaggtaattattcatgaacgtaaagtgtgtggaatcaattaaaagc
agcggggcgacttaaaaaactaagctcctaactttgatttctctacttgg
ggtcatctccaattgtgtgtgctctgtgaccttgctctcatatttgatgc
tagtgataatctccaaggattttagggacatgaatttcttaagagaaagt
ctcagtattcagtccacgttgttaagacttcaatagagagaaagagaaca
atttggtccagggattgttgggagccgccctcacatttgccattataaga
tggcgctgacagctgtgttctaagtggtaaacataatctgcacacgtgca
ggggcagttttcccgccatgtgttctgcctttctcgtgatgacaactggg
ccgatgggctgcagccaatcagggagtaatacgtcctaggcggaggataa
ttctccttaaaagggacggggttttgccatgctttttctctctctttctc
ttgctttcttgctctctcttgctctcttgctctctggctctctggctcct
gaagatgtaagcaataaagttttgccgcagaagattccggtttgttgcgt
tcttcctggccggtcgtgaacgcgggtaagagttggtgccggaaacccgg
gaagagaaaacccgggacggaaactaccatcaccggcgcaaggaagattc
ctcattccggaaccagaactgcgggtcacggtaataaagtgttccccgta
aacagactgttgagaaggatccagcgtggattcagaactcttcagctggg
gaatggtggtaatgaagtgttcccacaacagactgtgagaaggatcaact
gcgtgaattcagaactcttcagctggggacagggtacccgtagtatagct
ttacaggtaagcctg
gaattctcacctgaggaataccgaatggctgagaagcacctaaagaaatg
ttcaacattcttagtaatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagccagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagctggtacaactactctggaaatcagtctggcggtaactct
cagaaaattggacatagtattacctaaggacccagctatatataaaagat
gcctcaacatataacaaggacacatgctccattatgttcatagcaggctt
atttataatagccagaagctagaaagaacccagatgcccttcaacagaga
aatggatacagaaaatgtgatacatttacacaatggagtactactcagct
ataaaaaacaatgacttcatgaaattcttaagcaaatggatggaactaga
aaatattatcctgagtgataaaatgttatcccctttcccagttcccttcc
ctgcccccagaatctccctatcctaccctctcccctgcttctatgagggt
gctcctcccacctcccctgcctccctgccctggcattcccctacactggg
gcatagagccttcacaggaccaagggcttctcctcccattgatgtctgac
aaggccatcctctgctacatacgcggctggagccatgggtccctgcatgt
gtcctctttggttggtggtttaatccctgggagctctcgggtgggtggat
gagagatctggttagttgatattgttttttcttctgatgaaggttgcaaa
ctccttcagctcccttcagtcctttctctagctccttcattggagacccc
ttgctcagtccaatggttgactgcgagcatctgcttctgtatttgtcagc
tctggcaaagccttctcaggagacagccatatcaggctcctttcagcatg
ccacttcttgggcatctagcatagtgtctagggtttggggatagatagat
gtattattgcgctaatccccaggtggagacatcactggaatcgttctttt
cttcagtctctgcctccacacatggtctctgtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_130620609_130621521
seq2: B6Ng01-074L04.b_46_958

seq1  GAATTCCTCATAGTCTTTTTCAGTTCACAATGAGTACAGAGACTGGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCATAGTCTTTTTCAGTTCACAATGAGTACAGAGACTGGTGTG  50

seq1  AGTCGGTCCTACTGCTTCCAAACCTTTCTAAGAGCACAGAGGCCAGTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGGTCCTACTGCTTCCAAACCTTTCTAAGAGCACAGAGGCCAGTTTA  100

seq1  AGTAATTAATTATTCAGGTATAACATACCAAGGCTATACAACAAAAATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTAATTATTCAGGTATAACATACCAAGGCTATACAACAAAAATAG  150

seq1  AGATCAGGTAATTATTCATGAACGTAAAGTGTGTGGAATCAATTAAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGGTAATTATTCATGAACGTAAAGTGTGTGGAATCAATTAAAAGC  200

seq1  AGCGGGGCGACTTAAAAAACTAAGCTCCTAACTTTGATTTCTCTACTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGGGCGACTTAAAAAACTAAGCTCCTAACTTTGATTTCTCTACTTGG  250

seq1  GGTCATCTCCAATTGTGTGTGCTCTGTGACCTTGCTCTCATATTTGATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATCTCCAATTGTGTGTGCTCTGTGACCTTGCTCTCATATTTGATGC  300

seq1  TAGTGATAATCTCCAAGGATTTTAGGGACATGAATTTCTTAAGAGAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGATAATCTCCAAGGATTTTAGGGACATGAATTTCTTAAGAGAAAGT  350

seq1  CTCAGTATTCAGTCCACGTTGTTAAGACTTCAATAGAGAGAAAGAGAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTATTCAGTCCACGTTGTTAAGACTTCAATAGAGAGAAAGAGAACA  400

seq1  ATTTGGTCCAGGGATTGTTGGGAGCCGCCCTCACATTTGCCATTATAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTCCAGGGATTGTTGGGAGCCGCCCTCACATTTGCCATTATAAGA  450

seq1  TGGCGCTGACAGCTGTGTTCTAAGTGGTAAACATAATCTGCACACGTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGCTGACAGCTGTGTTCTAAGTGGTAAACATAATCTGCACACGTGCA  500

seq1  GGGGCAGTTTTCCCGCCATGTGTTCTGCCTTTCTCGTGATGACAACTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAGTTTTCCCGCCATGTGTTCTGCCTTTCTCGTGATGACAACTGGG  550

seq1  CCGATGGGCTGCAGCCAATCAGGGAGTAATACGTCCTAGGCGGAGGATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGATGGGCTGCAGCCAATCAGGGAGTAATACGTCCTAGGCGGAGGATAA  600

seq1  TTCTCCTTAAAAGGGACGGGGTTTTGCCATGCTTTTTCTCTCTCTTTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTTAAAAGGGACGGGGTTTTGCCATGCTTTTTCTCTCTCTTTCTC  650

seq1  TTGCTTTCTTGCTCTCTCTTGCTCTCTTGCTCTCTGGCTCTCTGGCTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTCTTGCTCTCTCTTGCTCTCTTGCTCTCTGGCTCTCTGGCTCCT  700

seq1  GAAGATGTAAGCAATAAAGTTTTGCCGCAGAAGATTCCGGTTTGTTGCGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGTAAGCAATAAAGTTTTGCCGCAGAAGATTCCGGTTTGTTGCGT  750

seq1  TCTTCCTGGCCGGTCGTGAACGCGGGTAAGAGTTGGTGCCGGAAACCCGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTGGCCGGTCGTGAACGCGGGTAAGAGTTGGTGCCGGAAACCCGG  800

seq1  GAAGAGAAAACCCGGGACGGAAACTACCATCACCGGCGCAAGGAAGATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAAAACCCGGGACGGAAACTACCATCACCGGCGCAAGGAAGATTC  850

seq1  CTCATTCCGGAACCAGAACTGCGGGTCACGGTAATAAAGTGTTCCCGTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||   |
seq2  CTCATTCCGGAACCAGAACTGCGGGTCACGGTAATAAAGTGTTCCCCGTA  900

seq1  AACAGACTGTTGA  913
      |||||||||||||
seq2  AACAGACTGTTGA  913