BAC Information

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BAC

Clone NameB6Ng01-078M19
Chromosome3 (Build37)
Map Location 56,553,808 - 56,554,888
singlet/doubletsinglet
Overlap genenone
Upstream geneMab21l1, 4933417G07Rik
Downstream geneLOC100040139, LOC666585, Tm4sf1, LOC383862, Tm4sf4, Wwtr1, Commd2, Gm410, EG623114, Rnf13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078M19.bB6Ng01-078M19.g
ACCDH894399DH894400
length1,0861,162
definitionDH894399|Mus musculus domesticus DNA, BAC clone: B6Ng01-078M19, 5' end.DH894400|Mus musculus domesticus DNA, BAC clone: B6Ng01-078M19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatcagctctaaagcaggataaacagtttcttgcagagagggac
catctttctttgttttctattgctgtgatgaacaccaggatcaaaagcaa
tacggagaggaaagagtttatttcctctcccagaatgtcatccatcatcc
agggaagtcagggtgggcttgaggcagggactgatgcaggggccatgcag
gtatagtgctacgggcttgcttagcttgttttcctccccaggggcagccc
tgtcctcagtgggccgggcatttccatatcaagaacaaatcaaacaagaa
aacacccaacaggcttacccacagggctatcctgtggagccatttttttc
tctgttaagatgattccttcttccagacaaccctagattctgtcaaattg
acaaatcaacaacaatgaaaccacccaaaaccaccaaaacctggctggca
caagctcctgggtctgcaagactgcagacttggtctcacagctggtgaca
ggcatatgataaaattcaaaactctgattccagagtccacagtgtggtac
ctcagaggttagaggtttaaggcttagactcctttttctctgggcttaag
gtagagcagggttgcttatgccaatgaaaggctcaggtagactggactgc
ccctccattctgatgaattcaccttccctccagcactgtttagccatcca
ttcttgcatccatgcacatatacactgaggtgcttcttacttgccagcca
ccaccttcaccacaatagtcgtaattcattgctatcacagctttttgaat
ggatgaattaattaatatttattaattttgtcatcataggcctcactgag
gagactctgaggacctgaaacttggaaactggcaatgggtgtcacagaga
ggttaagagatagatgtcagagctgtagagatggctcagtggttaagagc
attgactgctcttccagagattctgaggtcaattcccagcaaccacatgg
tggttcacagtcatctgtaatgggatcctgatgcctccttctgggggtgt
ttgaaggaccactaccggggtatccattccatatgt
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaagaatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagtttttctttgtttccacttgggttgatttcacccctgagtttgatt
atttcctgccgtctactcctcttgggtgaaatttgcttcctttttttcta
gagcttttagtgtgttgtcaagctgctatatgttgctcttctcccgtttt
ttcttggaagcactcattagctaggagtttccttcttaggaatgcttcaa
ttggtccccaaaggtttgggtacggtggggcttcattttcataactctaa
aaggccttaatttctttccttatatccttccttgtaccagtattcatggg
aaaaagatgttgtcattccatggtgaaagtgtggcctatcgtgtatatat
ttggttatgaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_56553808_56554888
seq2: B6Ng01-078M19.b_46_1131

seq1  GAATTCCATCAGCTCTAAAGCAGGATAAACAGTTTCTTGCAGAGAGGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCAGCTCTAAAGCAGGATAAACAGTTTCTTGCAGAGAGGGAC  50

seq1  CATCTTTCTTTGTTTTCTATTGCTGTGATGAACACCAGGATCAAAAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTCTTTGTTTTCTATTGCTGTGATGAACACCAGGATCAAAAGCAA  100

seq1  TACGGAGAGGAAAGAGTTTATTTCCTCTCCCAGAATGTCATCCATCATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGAGAGGAAAGAGTTTATTTCCTCTCCCAGAATGTCATCCATCATCC  150

seq1  AGGGAAGTCAGGGTGGGCTTGAGGCAGGGACTGATGCAGGGGCCATGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGTCAGGGTGGGCTTGAGGCAGGGACTGATGCAGGGGCCATGCAG  200

seq1  GTATAGTGCTACGGGCTTGCTTAGCTTGTTTTCCTCCCCAGGGGCAGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGTGCTACGGGCTTGCTTAGCTTGTTTTCCTCCCCAGGGGCAGCCC  250

seq1  TGTCCTCAGTGGGCCGGGCATTTCCATATCAAGAACAAATCAAACAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCAGTGGGCCGGGCATTTCCATATCAAGAACAAATCAAACAAGAA  300

seq1  AACACCCAACAGGCTTACCCACAGGGCTATCCTGTGGAGCCATTTTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCCAACAGGCTTACCCACAGGGCTATCCTGTGGAGCCATTTTTTTC  350

seq1  TCTGTTAAGATGATTCCTTCTTCCAGACAACCCTAGATTCTGTCAAATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTAAGATGATTCCTTCTTCCAGACAACCCTAGATTCTGTCAAATTG  400

seq1  ACAAATCAACAACAATGAAACCACCCAAAACCACCAAAACCTGGCTGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCAACAACAATGAAACCACCCAAAACCACCAAAACCTGGCTGGCA  450

seq1  CAAGCTCCTGGGTCTGCAAGACTGCAGACTTGGTCTCACAGCTGGTGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTCCTGGGTCTGCAAGACTGCAGACTTGGTCTCACAGCTGGTGACA  500

seq1  GGCATATGATAAAATTCAAAACTCTGATTCCAGAGTCCACAGTGTGGTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATATGATAAAATTCAAAACTCTGATTCCAGAGTCCACAGTGTGGTAC  550

seq1  CTCAGAGGTTAGAGGTTTAAGGCTTAGACTCCTTTTTCTCTGGGCTTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGGTTAGAGGTTTAAGGCTTAGACTCCTTTTTCTCTGGGCTTAAG  600

seq1  GTAGAGCAGGGTTGCTTATGCCAATGAAAGGCTCAGGTAGACTGGACTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGCAGGGTTGCTTATGCCAATGAAAGGCTCAGGTAGACTGGACTGC  650

seq1  CCCTCCATTCTGATGAATTCACCTTCCCTCCAGCACTGTTTAGCCATCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCATTCTGATGAATTCACCTTCCCTCCAGCACTGTTTAGCCATCCA  700

seq1  TTCTTGCATCCATGCACATATACACTGAGGTGCTTCTTACTTGCCAGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCATCCATGCACATATACACTGAGGTGCTTCTTACTTGCCAGCCA  750

seq1  CCACCTTCACCACAATAGTCGTAATTCATTGCTATCACAGCTTTTTGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTTCACCACAATAGTCGTAATTCATTGCTATCACAGCTTTTTGAAT  800

seq1  GGATGAATTAATTAATATTTATTAATTTTGTCATCATAGGCCTCACTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAATTAATTAATATTTATTAATTTTGTCATCATAGGCCTCACTGAG  850

seq1  GAGACTCTGAGGACCTGAAACTTGGAAACTGGCAATGGGTGTCACAGAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTCTGAGGACCTGAAACTTGGAAACTGGCAATGGGTGTCACAGAGA  900

seq1  GGTTAAGAGATAGATGTCAGAGCTGTAGAGATGGCTCAGTGGTTAAGAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAGAGATAGATGTCAGAGCTGTAGAGATGGCTCAGTGGTTAAGAGC  950

seq1  ATTGACTGCTCTTCCAGAGATTCTGAGGTCAATTCCCAGCAACCACATGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACTGCTCTTCCAGAGATTCTGAGGTCAATTCCCAGCAACCACATGG  1000

seq1  TGGTTCACAGTCATCTGTAATGGGAT-CTGATGCCCTCTTCT-GGTGTGT  1048
      |||||||||||||||||||||||||| ||||||||  ||||| || ||||
seq2  TGGTTCACAGTCATCTGTAATGGGATCCTGATGCCTCCTTCTGGGGGTGT  1050

seq1  TTG-AGGACCACTACC-GTGTATCCATT-CATATGT  1081
      ||| |||||||||||| | ||||||||| |||||||
seq2  TTGAAGGACCACTACCGGGGTATCCATTCCATATGT  1086