BAC Information

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BAC

Clone NameB6Ng01-079K06
Chromosome3 (Build37)
Map Location 41,059,221 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079K06.bB6Ng01-079K06.g
ACCDH894992DH894993
length999326
definitionDH894992|Mus musculus domesticus DNA, BAC clone: B6Ng01-079K06, 5' end.DH894993|Mus musculus domesticus DNA, BAC clone: B6Ng01-079K06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttcttcatatatattggataatagtcccc
tatattatttaggataagtaaagatcctttcccaatctcttggttgtctt
tttgtcttattgacggtgtcttttgccttgcagaagttttggaactttat
gaagtcccatttgttgattctcaatcttacagcacaagccattgctgttc
tattcaggaatttttcccgtgtacccatatttcgaggcttttccctactt
tctcctctataagtttcagtgtctctggttttatgtggagttccttaatc
ctcttagatttgaccttagtacaagaagatagaaatgtatcaattcgcat
tcttctacatgataaccgccagttgtgccagcaccatttgttgaaaatgc
tgtcttttttccactggatggttttagctcccttgtcaaagatcaagtga
ccataggtgtgtgggttcatttctgggtcttcaattctattccattggtg
tacttgtctgtcgctataccagtaccatgcagtttttaatcacaattgct
ctgtagtaaagctttaagtcaggcatggtgattccaccagaggttctttt
atccttgagaagagtttttactatcctaggtttttttgttattccagttg
aatttgcaaattgccctttctaattcgttgaaatattaagctggaatttt
gatcggcattccatttaatctgtagattgccttcggcaggatagttattt
tcactatattaatcctgctcatccatgatcatgggagatctttccatctt
ctgagatcttctttatttctttcttcagagacttgaagttcttgtaatac
agatctacacttccttagttggagtcacacgaaagtatttttattatttg
tgactatgtgaaggtgtgttctctatttctttctcatcttgttattttt
agtgagaaggttacctattcagtaacattcaaatttacttctagtagaga
agcgtgtgtgtggcccctgaggagcacccagtgcttccgaacggagctag
aatagctcagggctagtctgcagagtgattatttaggacagtagccttag
gacacaatggcctagcaaataggtggggtaaccatgaaagagttagggaa
tccccctgggacaggtttcttcactaggtccataggaacagcataattag
gcatttactaataactcctggtggtgggtttaacaatagactagcattac
acctggttcctgtcttagtggtaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059221_41059737
seq2: B6Ng01-079K06.b_43_558 (reverse)

seq1  AATCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCAT  50
      || |||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AACCCACACACCTATGGTCACTTGATCTTTGACAAGGGAGCTAAAACCAT  50

seq1  CCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGC  100

seq1  TGTTATCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACT  150
       |||||||||||||||||||||||||||| || | |||||| ||||||||
seq2  GGTTATCATGTAGAAGAATGCGAATTGATACATTTCTATCTTCTTGTACT  150

seq1  AAGGTCAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACT  200
      ||||||||||||||| |||| ||||||| |||||||||||||||||||||
seq2  AAGGTCAAATCTAAGAGGATTAAGGAACTCCACATAAAACCAGAGACACT  200

seq1  GAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAG  250
      ||||||||||||||||||||| ||||||||||| ||| ||||||  ||| 
seq2  GAAACTTATAGAGGAGAAAGTAGGGAAAAGCCTCGAA-ATATGGGTACAC  249

seq1  GGGAAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGA  300
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGGAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGA  299

seq1  ATAGACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGA  350
      ||  ||||||||||| |||| ||  | |||| ||||||||||||||||||
seq2  ATCAACAAATGGGACTTCATAAAGTTCCAAAACTTCTGCAAGGCAAAAGA  349

seq1  CACCGTCAATAAGACAAAAAGGC-ACCAACAGATTGGGAAAGGATCTTTA  399
      ||||||||||||||||||||| | ||||| ||||||||||||||||||||
seq2  CACCGTCAATAAGACAAAAAGACAACCAAGAGATTGGGAAAGGATCTTTA  399

seq1  CCTATCCTAAATCAGATAGGGGACTAATATCCAATATATATCAAGAACTC  449
      | |||||||||| | ||||||||||| |||||||||||||| ||||||||
seq2  CTTATCCTAAATAATATAGGGGACTATTATCCAATATATATGAAGAACTC  449

seq1  AAGAAGGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTC  499
      ||||||||||| |||||||||||||||||||||||| |||||||||||||
seq2  AAGAAGGTGGACTCCAGAAAATCAAATAACCCCATT-AAAAATGGGGCTC  498

seq1  AGAGCTAAACAAAGAATT  517
      ||||||||||||||||||
seq2  AGAGCTAAACAAAGAATT  516