BAC Information

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BAC

Clone NameB6Ng01-081L22
Chromosome3 (Build37)
Map Location 26,667,006 - 26,667,549
singlet/doubletsinglet
Overlap geneSpata16
Upstream geneNlgn1, LOC229152
Downstream geneLOC665258, Ect2, Aadacl1, LOC100040527, Tnfsf10, Ghsr, Fndc3b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081L22.bB6Ng01-081L22.g
ACCDH896502DH896503
length1,107742
definitionDH896502|Mus musculus domesticus DNA, BAC clone: B6Ng01-081L22, 5' end.DH896503|Mus musculus domesticus DNA, BAC clone: B6Ng01-081L22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctacttttcaggtgtgttagggtgtcctggattgggcgaagtgg
gcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagga
ttcttacgtttacctttcgccatctggcaatctctggagttagttgttat
agttgtctttgttaagagattgttcctctgttgattttgttaccctctat
cagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagagc
agtctctgtaggcaagctctcctctttcagggaaggtgtacagttatctg
gtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatcttt
cccagaagctgtgttgctttggccaggaaggtggccagttgtctggagtc
gaagatgtcgccgcctgagaagctctgtggctcttgccaggaaggtggct
ggttgtctggagctgaagatggcgccgcccagaagctctgcgactctcgc
ccgtcccagaaacggctggcactctgtattccacacggtcacccgtgcag
cctgccctccgcggagtcccggagccaagaaggctcccgcgggcgcctgt
gccacaaacctctcaggccgggcagacccccgtgctctcaccaggaaggt
ggctggctgtcttatcccagttgttaacattgaattttatcccagttgtt
tccttctagtccttccgtgtttgcattcctctgttttgtgtaagaatcca
gtaacctcattgtacctttgccggtgtgtcacccaacttccctattttct
tctgtataaaaagtttgatgcttgatttgacaattacattcagatccaca
ctcccttgtgtccagtctgtttgtcatcccaattcccaccgactctatgc
ccatctgctggaacccctgattcccacagattgatggggccgattagcct
gtccgtgcatgtgtaatgtgtatcacaagtatagtagacaaatttccacg
ttcttacactggtgacccaaggcaagactcaatcataggctctgaattga
ctacccg
gaattctcacctaaggaatcttgaaaggctgagaaacacccaaagaaatg
ttcaacttctttagtcctcagggaaatgcaaatgaatatgaccttgagat
tccacctcacgtcaatcagaatggctaggatcaaaaactctggcaatagc
agatgctggtgaagatgtagagaaaggaacactcctgcattgctggtggg
attgcaaccactctgtcaatcaatctggcagttcctcagaaaattggaaa
tagctctacctgaagatgtagctatactactcctgggtatgtatccaaaa
gatgctctaacatataacaaggacacatgctctattatgttcataacagt
cttatttataatagccagaagctgggaataacccagatgtccctcaactg
aagaatagatatagaaaatgtggcacatttacataatggaatccactcac
ctattaaaaatgatgatttcatgacttttgtaggcaagtggatggaacta
gaaatatcattctgagtgaggtatcccagacccaaaaggacatatatggt
atgtactcactgataaatggatattagctcaaaagctcagaatacctatg
gtacaacttagagcatatgaagcttaataagaaggaaggccaaagtgagg
aggcttcaaacccatataaggaaacaaaataatcacaggaggaagaatga
gggagggacctggttgggagaggggagggagagaagaaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_26667006_26667549
seq2: B6Ng01-081L22.b_632_1153

seq1  CGGTCACCCGTGCAGCCTGCCCTCCGCGGAGTCCCGGAGCCAAGAAGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCACCCGTGCAGCCTGCCCTCCGCGGAGTCCCGGAGCCAAGAAGGCT  50

seq1  CCCGCGGGCGCCTGTGCCACAAACCTCTCAGGCCGGGCAGACCCCCGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCGGGCGCCTGTGCCACAAACCTCTCAGGCCGGGCAGACCCCCGTGC  100

seq1  TCTCACCAGGAAGGTGGCTGGCTGTCTTATCCCAGTTGTTAACATTGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCAGGAAGGTGGCTGGCTGTCTTATCCCAGTTGTTAACATTGAAT  150

seq1  TTTATCCCAGTTGTTTCCTTCTAGTCCTTCCGTGTTTGCATTCCTCTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCCAGTTGTTTCCTTCTAGTCCTTCCGTGTTTGCATTCCTCTGTT  200

seq1  TTGTGTAAGAATCCAGTAACCTCATTGTACC-TTGCCGGTGTGTCACCCA  249
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTGTGTAAGAATCCAGTAACCTCATTGTACCTTTGCCGGTGTGTCACCCA  250

seq1  ACTTCCCTATTTTCTTCTGTATAAAAAGTTTGATGCTTGATTTGACAAAT  299
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ACTTCCCTATTTTCTTCTGTATAAAAAGTTTGATGCTTGATTTGAC-AAT  299

seq1  TACATTCAGATCCACACTCCCTTGTGTCCAGTCTGTTTGTCATCCCAATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCAGATCCACACTCCCTTGTGTCCAGTCTGTTTGTCATCCCAATT  349

seq1  CCCACCGACTCTATGCCCATCTGCTGGAACCCCTGATTCCCACAGATTGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCCACCGACTCTATGCCCATCTGCTGGAACCCCTGATTCCCACAGATTG-  398

seq1  AGGGGGCCGATTAGGCCTGGTCCGTGGCAATTGTGTTTATATTGTTGTAT  449
      | ||||||||||| |||| |||||| |||  ||||    || || |||||
seq2  ATGGGGCCGATTA-GCCT-GTCCGT-GCA--TGTG----TAATG-TGTAT  438

seq1  CACAAAGTATAGTAAGACAAAATATCCAACCGTTTTCTACACTGGTGAAC  499
      ||| ||||||||| |||| |||| ||||  |||| | |||||||||| ||
seq2  CAC-AAGTATAGT-AGAC-AAATTTCCA--CGTTCT-TACACTGGTG-AC  481

seq1  CCAAGGCAAGACTCAATTCATAGGCTTCTGATTTTGAACTACCCG  544
      |||||||||||||||| |||||||| ||||| ||   ||||||||
seq2  CCAAGGCAAGACTCAA-TCATAGGC-TCTGAATT--GACTACCCG  522