BAC Information

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BAC

Clone NameB6Ng01-082D18
Chromosome3 (Build37)
Map Location 63,070,299 - 63,293,978
singlet/doubletdoublet
Overlap geneMme
Upstream gene4631416L12Rik, Dhx36, Gpr149, LOC676984, LOC666967
Downstream genePlch1, LOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032, EG56544, 4930518C23Rik, LOC380739, EG637004, EG667031, EG637053, LOC672951, EG639869
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082D18.bB6Ng01-082D18.g
ACCDH896851DH896852
length132426
definitionDH896851|Mus musculus domesticus DNA, BAC clone: B6Ng01-082D18, 5' end.DH896852|Mus musculus domesticus DNA, BAC clone: B6Ng01-082D18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,070,299 - 63,070,430)(63,293,547 - 63,293,978)
sequence
tttatgttttaattaaccttgtccctcattgtctctggatagagagggga
atctttatagtgtctgccatattctgctattctgctgctttttttttctt
gccttagtagtgtgggggtagtgggggtgggg
aggtcatttacagttgaagttactattgagagatatagacacattctttt
tagtttggagaacttttttttttctggttgtttgggttattgtttgatct
ttactttcgtcccaatttctatcaaggacttacttgtttattatgttgta
aacatggcatactccttttagctctcattttttttctattttttctctca
taaaatgtgttatttcctgtgcaggagtgattgaaatattgaaatcctac
ccctgtcccccatacatgtgcttctgagagaatcttctgtcaggctgtct
gggttgggagtcctggactccctcagtttgtacttatcttgaaatttgtt
tattttctgtctatttaaaaagatttatttgaattattttaaaagtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_63070299_63070430
seq2: B6Ng01-082D18.b_49_180

seq1  TTTATGTTTTAATTAACCTTGTCCCTCATTGTCTCTGGATAGAGAGGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTTTTAATTAACCTTGTCCCTCATTGTCTCTGGATAGAGAGGGGA  50

seq1  ATCTTTATAGTGTCTGCCATATTCTGCTATTCTGCTGCTTTTTTTTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTATAGTGTCTGCCATATTCTGCTATTCTGCTGCTTTTTTTTTCTT  100

seq1  GCCTTAGTAGTGTGGGGGTAGTGGGGGTGGGG  132
      ||||||||||||||||||||||||||||||||
seq2  GCCTTAGTAGTGTGGGGGTAGTGGGGGTGGGG  132

seq1: chr3_63293547_63293978
seq2: B6Ng01-082D18.g_68_499 (reverse)

seq1  ACACACACACACACACACACACACACACACACTTTTAAAATAATTCAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACTTTTAAAATAATTCAAAT  50

seq1  AAATCTTTTTAAATAGACAGAAAATAAACAAATTTCAAGATAAGTACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTTTAAATAGACAGAAAATAAACAAATTTCAAGATAAGTACAAA  100

seq1  CTGAGGGAGTCCAGGACTCCCAACCCAGACAGCCTGACAGAAGATTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGAGTCCAGGACTCCCAACCCAGACAGCCTGACAGAAGATTCTCT  150

seq1  CAGAAGCACATGTATGGGGGACAGGGGTAGGATTTCAATATTTCAATCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCACATGTATGGGGGACAGGGGTAGGATTTCAATATTTCAATCAC  200

seq1  TCCTGCACAGGAAATAACACATTTTATGAGAGAAAAAATAGAAAAAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCACAGGAAATAACACATTTTATGAGAGAAAAAATAGAAAAAAAAT  250

seq1  GAGAGCTAAAAGGAGTATGCCATGTTTACAACATAATAAACAAGTAAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTAAAAGGAGTATGCCATGTTTACAACATAATAAACAAGTAAGTC  300

seq1  CTTGATAGAAATTGGGACGAAAGTAAAGATCAAACAATAACCCAAACAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATAGAAATTGGGACGAAAGTAAAGATCAAACAATAACCCAAACAAC  350

seq1  CAGAAAAAAAAAAGTTCTCCAAACTAAAAAGAATGTGTCTATATCTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAAAAAAAGTTCTCCAAACTAAAAAGAATGTGTCTATATCTCTCA  400

seq1  ATAGTAACTTCAACTGTAAATGACCTGAATTC  432
      ||||||||||||||||||||||||||||||||
seq2  ATAGTAACTTCAACTGTAAATGACCTGAATTC  432