BAC Information

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BAC

Clone NameB6Ng01-087E03
Chromosome3 (Build37)
Map Location 38,272,201 - 38,273,241
singlet/doubletsinglet
Overlap genenone
Upstream geneFgf2, LOC100040649, Nudt6, Spata5, LOC665778, Spry1, EG381438, LOC100038875, LOC100041338, EG626367, 4930556A17Rik, LOC665811, EG665821, LOC100041366, LOC100040785
Downstream geneLOC665838, Ankrd50, LOC100041378, LOC665855, LOC100040824, Fat4, LOC100041432, LOC100040853
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087E03.bB6Ng01-087E03.g
ACCDH900437DH900438
length1,037166
definitionDH900437|Mus musculus domesticus DNA, BAC clone: B6Ng01-087E03, 5' end.DH900438|Mus musculus domesticus DNA, BAC clone: B6Ng01-087E03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcatttttcattcttcttcagttatagttgtaacagcatttca
gccaaaagaaactataatgcattttcattgtttcatatttggttcaattc
tgttttcaaaatagtcttagaaatacttctttcttcctaccagcctcttc
cacgtcccatcactgactacatagcttaatagccaagtatctcctaagct
gaaataagccattattgctttcatctactaccatggcttctcagaagtct
tccccagcatcttgggtaaccagctccttgctcaagactccagaaagact
ctgaaaacaggtgccaacgtgccttactcttcagcaatgcaagtactcct
caaatgtcattctctgtgaactcttcctgtaaaactgactgtgtctcata
cgcaaaaaactcaggcgcacaaggacatacaactcccttttcctctaacc
ctaatcagcacttttaggtgtgtcactccctcacaagactgtagactcca
tgagatgatagaactttctcgtatgttgtgattagcacttattcccagaa
cccgaaacaggacctggcatgttcagattgctcagaaaatatgtagctag
agagagaatgaaagtggacgcctgactcattcacaaaccagctttgcatg
ctgagcacagcaccctgggggttcactttccttgtctgttccccttatcc
atgcatagagagggctgctttgagactgtccaggttgtgaagatgtgggg
accatcttcatcatcaattgttcccccatttaaaacatttgaaataactg
ggatgatacaatgacaaattcattaggaactccaatgatttttgtatgtt
ggacagattcatagtctacactttaggagtaggaagtacactgcttaaag
gcttccagccacatttatctagatctaaataagaaaaggaaaaataagta
tgttgatcttaacttgaaatgggttttctgaaatggggactaaatcattt
taatattctaacatagatcggcttttggggtgaaggg
tcatattggttccctgacctgtggggtgagggctattatgatttaaaagg
caaaatggaaacctttacagttgcctctgccaaagaaaacagtacattaa
aaaccctggaggaaactgccaaaattagtgccactatcaaggacttgaaa
gatgcaggggtggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_38272201_38273241
seq2: B6Ng01-087E03.b_48_1084

seq1  GAATTCTTCATTTTTCATTCTTCTTCAGTTATAGTTGTAACAGCATTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATTTTTCATTCTTCTTCAGTTATAGTTGTAACAGCATTTCA  50

seq1  GCCAAAAGAAACTATAATGCATTTTCATTGTTTCATATTTGGTTCAATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAAGAAACTATAATGCATTTTCATTGTTTCATATTTGGTTCAATTC  100

seq1  TGTTTTCAAAATAGTCTTAGAAATACTTCTTTCTTCCTACCAGCCTCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCAAAATAGTCTTAGAAATACTTCTTTCTTCCTACCAGCCTCTTC  150

seq1  CACGTCCCATCACTGACTACATAGCTTAATAGCCAAGTATCTCCTAAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTCCCATCACTGACTACATAGCTTAATAGCCAAGTATCTCCTAAGCT  200

seq1  GAAATAAGCCATTATTGCTTTCATCTACTACCATGGCTTCTCAGAAGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAGCCATTATTGCTTTCATCTACTACCATGGCTTCTCAGAAGTCT  250

seq1  TCCCCAGCATCTTGGGTAACCAGCTCCTTGCTCAAGACTCCAGAAAGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGCATCTTGGGTAACCAGCTCCTTGCTCAAGACTCCAGAAAGACT  300

seq1  CTGAAAACAGGTGCCAACGTGCCTTACTCTTCAGCAATGCAAGTACTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAACAGGTGCCAACGTGCCTTACTCTTCAGCAATGCAAGTACTCCT  350

seq1  CAAATGTCATTCTCTGTGAACTCTTCCTGTAAAACTGACTGTGTCTCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTCATTCTCTGTGAACTCTTCCTGTAAAACTGACTGTGTCTCATA  400

seq1  CGCAAAAAACTCAGGCGCACAAGGACATACAACTCCCTTTTCCTCTAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAAAAAACTCAGGCGCACAAGGACATACAACTCCCTTTTCCTCTAACC  450

seq1  CTAATCAGCACTTTTAGGTGTGTCACTCCCTCACAAGACTGTAGACTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCAGCACTTTTAGGTGTGTCACTCCCTCACAAGACTGTAGACTCCA  500

seq1  TGAGATGATAGAACTTTCTCGTATGTTGTGATTAGCACTTATTCCCAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGATAGAACTTTCTCGTATGTTGTGATTAGCACTTATTCCCAGAA  550

seq1  CCCGAAACAGGACCTGGCATGTTCAGATTGCTCAGAAAATATGTAGCTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAAACAGGACCTGGCATGTTCAGATTGCTCAGAAAATATGTAGCTAG  600

seq1  AGAGAGAATGAAAGTGGACGCCTGACTCATTCACAAACCAGCTTTGCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAATGAAAGTGGACGCCTGACTCATTCACAAACCAGCTTTGCATG  650

seq1  CTGAGCACAGCACCCTGGGGGTTCACTTTCCTTGTCTGTTCCCCTTATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCACAGCACCCTGGGGGTTCACTTTCCTTGTCTGTTCCCCTTATCC  700

seq1  ATGCATAGAGAGGGCTGCTTTGAGACTGTCCAGGTTGTGAAGATGTGGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATAGAGAGGGCTGCTTTGAGACTGTCCAGGTTGTGAAGATGTGGGG  750

seq1  ACCATCTTCATCATCAATTGTTCCCCCATTTAAAACATTTGAAATAACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTTCATCATCAATTGTTCCCCCATTTAAAACATTTGAAATAACTG  800

seq1  GGATGATACAATGACAAATTCATTAGGAACTCCAATGATTTTTGTATGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGATACAATGACAAATTCATTAGGAACTCCAATGATTTTTGTATGTT  850

seq1  GGACAGATTCATAGTCTACACTTTAGGAAGTAGGAAGTACACTGCTT-AA  899
      ||||||||||||||||||||||||||| ||||||||||||||||||| ||
seq2  GGACAGATTCATAGTCTACACTTTAGG-AGTAGGAAGTACACTGCTTAAA  899

seq1  GGCTTCCAGCCACATTTATCTAGATCTAAATAAGAAAAGGAAAAAATAAG  949
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGCTTCCAGCCACATTTATCTAGATCTAAATAAGAAAAGG-AAAAATAAG  948

seq1  TATG-TGATCTTAAACTTGAAAATGGGTTTTCTGAAATGGGGACTTAAAT  998
      |||| ||||||| |||||| |||||||||||||||||||||||| |||||
seq2  TATGTTGATCTT-AACTTG-AAATGGGTTTTCTGAAATGGGGAC-TAAAT  995

seq1  CATTTTAATAATCTAAACATAGATCGGCTTTTGGGGTGAAGGG  1041
      |||||||||| ||| ||||||||||||||||||||||||||||
seq2  CATTTTAATATTCT-AACATAGATCGGCTTTTGGGGTGAAGGG  1037