BAC Information

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BAC

Clone NameB6Ng01-088F11
Chromosome3 (Build37)
Map Location 150,732,885 - 150,733,751
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040633, LOC100040455, LOC100040463, LOC623554
Downstream geneEltd1, Ifi44, H28, Ptgfr, LOC100040741, LOC100040597
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088F11.bB6Ng01-088F11.g
ACCDH901219DH901220
length8671,255
definitionDH901219|Mus musculus domesticus DNA, BAC clone: B6Ng01-088F11, 5' end.DH901220|Mus musculus domesticus DNA, BAC clone: B6Ng01-088F11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtccaaggaaatttccagcacagcattcatctgcatcctttgc
caaccccttttgaggtttgctttcgggctgagcacggctttctgtaggag
gttagtacagtcttgaagttttacaccatagccccaggtgtttttgtcag
atttttaaagaagaaagcacttcacattcaactatataaatggaggcaaa
tggtaataaaattttatgtgctcatgtttattttgagggaactaatgttt
aatctgattcaattaaaatcaaccacagaacatttgcctacagactgtgc
atatacatctggaagctgatagccattattgggaggccttgaaaatgcat
ggatgtgtgtaatgtagagtcaagagtaatgtcaatgggggaaggtcctt
gataagtagctgctaacatctctgctgtggatagcactgctaatgtcaat
gagagttgaaaacagaaaataaagagaagagaccttcccttaggttagga
ctttgtttccatggaagtttcaaatgcatggctccaaaacctgacactca
gaggacttgtttttattgtttggtttgttgtttgccttattttcccaggt
ggttcataactctaaaaatgctctgtttgacattgaaatattatataagc
ttgagttcaaagccagttcttcaacaatttattaattccaatgtagcata
caaaagacaaactttgattagcttttgtgtgtgttttcctcttattagtg
tcttttcctatcatgcagatggtatcatgagaactgaggggaaacagttg
tctacattcccattggtttatctagttcttttttctttcttttttttggg
gggggggatttatttat
gaattcctgtccttatgcatagcttctttactttaatcaaattgaactaa
gtagattttttagtttatataattgaaattatataaacacattttgaaga
actgttttgtatggctttaaattgtcttcacagtaatattggtgttacag
ctatgtctccatttttaagagaatgttttagcaagtctaatttaattgta
gatgtaagtgagtgcttgtttcacagactttatatctacaactcctgagt
tgggtagtgtcttagtcaggacttctattcctgaacaaacatcatgacca
agaagcaagttggggagaaaagggtttattcagcttatacttccacattg
ctgttcattaccaaaggaattcaggactggaactcaagcaggtcaggaag
caggaactgatgcagaggccatggagagatgttacttactgtcttacttc
ccctggcttgctcagcttgctttcttatagaaccaaagactaccagccca
ggaatggtcccacccacaagggacccttgatcactaattgagaaaatgcc
ccacagctgtatctcatggaggcatttccccaactgaagctcctttctct
gtgataactccagcttgtgtcaagttgacacaaaattagccagtatgatt
gaccccttgtcaacttgacacacaaacacatcactagtaagcctcaaccc
ttagttcttattcatccccaagatcttaaataactttaaacgtcccacag
tctttacatattaaaagttcaatccctttaaaatatccagtatcttttaa
aattcaaagtactttaaaattcaaaatctcttaactgtgggcttcactaa
aaaacttccttcaagagggaaaatatcagggcacagtcacaatcaagagc
aaaatcaatctccaaccatccaatgtctgggctcctccaagggcttgggt
cacttctccagccatgccctttgtagcacacactttgtcttctaggctca
gctctctactcactgctgctgctgttctggtggtcatcctcatggtattg
gcatctccaaacactgctgtcttccactgtactaggctcaccacagccct
ctgatagctctcttcatgctgcaggcctcaaattctttgcatgaaccctc
agtctgggctcatgcaccttagggtgaactacaatggcttcatgatctcc
aaggcgtggctcacgcgcctctgcatgacccttcatgtgctcgaaaccga
tgtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_150732885_150733751
seq2: B6Ng01-088F11.b_47_913

seq1  GAATTCAGTCCAAGGAAATTTCCAGCACAGCATTCATCTGCATCCTTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCCAAGGAAATTTCCAGCACAGCATTCATCTGCATCCTTTGC  50

seq1  CAACCCCTTTTGAGGTTTGCTTTCGGGCTGAGCACGGCTTTCTGTAGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCCTTTTGAGGTTTGCTTTCGGGCTGAGCACGGCTTTCTGTAGGAG  100

seq1  GTTAGTACAGTCTTGAAGTTTTACACCATAGCCCCAGGTGTTTTTGTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTACAGTCTTGAAGTTTTACACCATAGCCCCAGGTGTTTTTGTCAG  150

seq1  ATTTTTAAAGAAGAAAGCACTTCACATTCAACTATATAAATGGAGGCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAAGAAGAAAGCACTTCACATTCAACTATATAAATGGAGGCAAA  200

seq1  TGGTAATAAAATTTTATGTGCTCATGTTTATTTTGAGGGAACTAATGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAATAAAATTTTATGTGCTCATGTTTATTTTGAGGGAACTAATGTTT  250

seq1  AATCTGATTCAATTAAAATCAACCACAGAACATTTGCCTACAGACTGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGATTCAATTAAAATCAACCACAGAACATTTGCCTACAGACTGTGC  300

seq1  ATATACATCTGGAAGCTGATAGCCATTATTGGGAGGCCTTGAAAATGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATCTGGAAGCTGATAGCCATTATTGGGAGGCCTTGAAAATGCAT  350

seq1  GGATGTGTGTAATGTAGAGTCAAGAGTAATGTCAATGGGGGAAGGTCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGTGTAATGTAGAGTCAAGAGTAATGTCAATGGGGGAAGGTCCTT  400

seq1  GATAAGTAGCTGCTAACATCTCTGCTGTGGATAGCACTGCTAATGTCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGTAGCTGCTAACATCTCTGCTGTGGATAGCACTGCTAATGTCAAT  450

seq1  GAGAGTTGAAAACAGAAAATAAAGAGAAGAGACCTTCCCTTAGGTTAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTGAAAACAGAAAATAAAGAGAAGAGACCTTCCCTTAGGTTAGGA  500

seq1  CTTTGTTTCCATGGAAGTTTCAAATGCATGGCTCCAAAACCTGACACTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTTCCATGGAAGTTTCAAATGCATGGCTCCAAAACCTGACACTCA  550

seq1  GAGGACTTGTTTTTATTGTTTGGTTTGTTGTTTGCCTTATTTTCCCAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACTTGTTTTTATTGTTTGGTTTGTTGTTTGCCTTATTTTCCCAGGT  600

seq1  GGTTCATAACTCTAAAAATGCTCTGTTTGACATTGAAATATTATATAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCATAACTCTAAAAATGCTCTGTTTGACATTGAAATATTATATAAGC  650

seq1  TTGAGTTCAAAGCCAGTTCTTCAACAATTTATTAATTCCAATGTAGCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTCAAAGCCAGTTCTTCAACAATTTATTAATTCCAATGTAGCATA  700

seq1  CAAAAGACAAACTTTGATTAGCTTTTGTGTGTGTTTTCCTCTTATTAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGACAAACTTTGATTAGCTTTTGTGTGTGTTTTCCTCTTATTAGTG  750

seq1  TCTTTTCCTATCATGCAGATGGTATCATGAGAACTGAGGGGAAACAGTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCCTATCATGCAGATGGTATCATGAGAACTGAGGGGAAACAGTTG  800

seq1  TCTACATTCCCATTGGTTTATCTAGTTCTTTTTTCTTTCTTTTTTTTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCTACATTCCCATTGGTTTATCTAGTTCTTTTTTCTTTCTTTTTTTTGGG  850

seq1  GGGGGGGATTTATTTAT  867
      |||||||||||||||||
seq2  GGGGGGGATTTATTTAT  867