BAC Information

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BAC

Clone NameB6Ng01-089H19
Chromosome3 (Build37)
Map Location 132,846,186 - 132,846,923
singlet/doubletsinglet
Overlap gene9130221D24Rik
Upstream geneLOC100039018, EG433653, LOC668857, Scye1, A630047E20Rik, LOC668858, Npnt, Gstcd, Ints12
Downstream genePpa2, E130014J05Rik, EG620205, LOC100039168, LOC668862, LOC100039199
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089H19.bB6Ng01-089H19.g
ACCDH902052DH902053
length9501,169
definitionDH902052|Mus musculus domesticus DNA, BAC clone: B6Ng01-089H19, 5' end.DH902053|Mus musculus domesticus DNA, BAC clone: B6Ng01-089H19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagcaggaccagatagagtgaaggatctagggttcttctcactt
ctctcaaatacaaaagaaagggcagagaggctgcaaacatttcaatgggc
accatgtctatgaggacaaagcatttttaagtaaatgcaaaagtttgaac
catgataaaaaagaagaaaaattaaggaaagaattgccaggttcctgtgt
ggtacaaagtaattctttattggttactatagtctttgagttaatacaat
ttcataaatctattttcatctactgagaactttatatttagacatttatc
atacacagagaggtacaaatttaatgttttaaattttttttactttttaa
ttgaaaaccaagacaatacctatatttatggctagaaacatgctatcttt
atatatgcttacattgtgaaatggctatattacttcaacagtttatctgt
gtattcaataagaacactgaaaatgtactctctcagcagttttcaggtat
atatcataatatatatgataatcagtggatcacttcaacttgttccttct
atgtaaaactttatgactttgacaagaaactttcaaaagttaaccagccc
caaccactggaataattttactctgtattctgcaaatttgacgttgttat
actttctagctaaaccatgtggcttttgtgcttcaacagattcatttcaa
ttatcataatacaaagttcatccacattgtcacaaatgacagatttcata
atgtcttaaaggatgagtagtataacagcaggcaaatttatccatttatc
cactgggatagaaatgtctattggatgcgtatttcttgattattgtgaat
gatacagggaacatggcattgtatctgtttggcaatcggatttcagttct
tttggctatatctagaagtaagtctggatcatatgacctccctgcgctgc

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgtaatcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccggaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagcgagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagataaaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagatttttattgga
aaggacccagatgtagctgtctcttgtgagactatgcccggggcctagca
aacacagaagtggatgctcacagtcagctaatggatgggatcatagggct
cccaatggaggagctagaagaagtagccagagctaaaggatctgcaccct
ataggtggacacatatgactacagtacccggagctccttgactctagctg
ccatatatatcaaagatggctagtcggccatcactgaagagagcccattg
gacctggcactttatgccagtacaggaccctagtccaaagggggatgggt
ggggcaggggagtggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_132846186_132846923
seq2: B6Ng01-089H19.b_45_782 (reverse)

seq1  CATTTGTGACAATGTGGATGAACTTTGTATTATGATAATTGAAATGAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTGACAATGTGGATGAACTTTGTATTATGATAATTGAAATGAATC  50

seq1  TGTTGAAGCACAAAAGCCACATGGTTTAGCTAGAAAGTATAACAACGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAAGCACAAAAGCCACATGGTTTAGCTAGAAAGTATAACAACGTCA  100

seq1  AATTTGCAGAATACAGAGTAAAATTATTCCAGTGGTTGGGGCTGGTTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCAGAATACAGAGTAAAATTATTCCAGTGGTTGGGGCTGGTTAAC  150

seq1  TTTTGAAAGTTTCTTGTCAAAGTCATAAAGTTTTACATAGAAGGAACAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAAGTTTCTTGTCAAAGTCATAAAGTTTTACATAGAAGGAACAAG  200

seq1  TTGAAGTGATCCACTGATTATCATATATATTATGATATATACCTGAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTGATCCACTGATTATCATATATATTATGATATATACCTGAAAAC  250

seq1  TGCTGAGAGAGTACATTTTCAGTGTTCTTATTGAATACACAGATAAACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGAGAGTACATTTTCAGTGTTCTTATTGAATACACAGATAAACTG  300

seq1  TTGAAGTAATATAGCCATTTCACAATGTAAGCATATATAAAGATAGCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTAATATAGCCATTTCACAATGTAAGCATATATAAAGATAGCATG  350

seq1  TTTCTAGCCATAAATATAGGTATTGTCTTGGTTTTCAATTAAAAAGTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGCCATAAATATAGGTATTGTCTTGGTTTTCAATTAAAAAGTAAA  400

seq1  AAAAATTTAAAACATTAAATTTGTACCTCTCTGTGTATGATAAATGTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTTAAAACATTAAATTTGTACCTCTCTGTGTATGATAAATGTCTA  450

seq1  AATATAAAGTTCTCAGTAGATGAAAATAGATTTATGAAATTGTATTAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAAGTTCTCAGTAGATGAAAATAGATTTATGAAATTGTATTAACT  500

seq1  CAAAGACTATAGTAACCAATAAAGAATTACTTTGTACCACACAGGAACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACTATAGTAACCAATAAAGAATTACTTTGTACCACACAGGAACCT  550

seq1  GGCAATTCTTTCCTTAATTTTTCTTCTTTTTTATCATGGTTCAAACTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATTCTTTCCTTAATTTTTCTTCTTTTTTATCATGGTTCAAACTTTT  600

seq1  GCATTTACTTAAAAATGCTTTGTCCTCATAGACATGGTGCCCATTGAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTACTTAAAAATGCTTTGTCCTCATAGACATGGTGCCCATTGAAAT  650

seq1  GTTTGCAGCCTCTCTGCCCTTTCTTTTGTATTTGAGAGAAGTGAGAAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCAGCCTCTCTGCCCTTTCTTTTGTATTTGAGAGAAGTGAGAAGAA  700

seq1  CCCTAGATCCTTCACTCTATCTGGTCCTGCTGGAATTC  738
      ||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGATCCTTCACTCTATCTGGTCCTGCTGGAATTC  738