BAC Information

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BAC

Clone NameB6Ng01-089J07
Chromosome3 (Build37)
Map Location 12,150,755 - 12,151,784
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667999
Downstream geneEG621965, LOC100039798, EG668033, LOC668037
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089J07.bB6Ng01-089J07.g
ACCDH902122DH902123
length1,2541,029
definitionDH902122|Mus musculus domesticus DNA, BAC clone: B6Ng01-089J07, 5' end.DH902123|Mus musculus domesticus DNA, BAC clone: B6Ng01-089J07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaaaaaaaaatcatccaagaagttcaagtaggctttatcttgg
agatgtaagaatggttaattatatgaaaatcaataagctcaatctactac
ataaacagactgagataatacatatgatcatctcactagatgcagaaaag
tcctttgatacaatccaaacctcttcatgatgaaagtctcaaagagatta
gggtgtaggggacatacttaagcatgatacaggcaacttatagcaagcct
ataaccaacatcaggttagctggagataaattcaaatcagttccactaaa
attaggaaaaagacaaattgtccatgctcataatacctatttattatagt
gcttgaagttatagctagagcagttacagtgttagacaatcaaggcaata
caaatttcaaagaaagaagtcaaagtatctttttgtgaagatgatatgag
agtatacataagtgattccaaacttttcactatagaactccaatagctgt
ttaaacactttcagcaaaatagctgaatacaaaattaactcacaaatatc
agtatccctcatacgtacaaatgacaagtggactgagaaagacatcaggg
aaagaagagctttcacaatagcctcaaataatatcaaatatcttggagta
actctaaaaaagcaagtgaaatactaaaatgataaaaaattcaagtcttt
gatgaataaaatagaaaaagatattagaagataaaacatgctcttgaatt
tggtaggattaaatagtagtcaaactggcactcctatgaatagaatttta
caaaagctggaaacaatcttgatggcctttcaatagaagaatggataaag
aaaatgtggtatatttacagactagaacactatttcagatgttaaaaatg
atatcatagaatttggagcaaaattgatgggaattagaaaaaaaaaatca
ttttgattgaggtcacccagacttcagaaaatataaaatttgggattaat
tcactgatttctgatagtagccattagacaaatgataagcaagctacaat
ctgtagatcagagcagtttagttagagaaggactaggagaagaacaatta
atttcagatgaaaaccctgaaatactttgtagttgacttatggacactag
aatgaagaatcaaagggtaatgcaggaagctaccgtaatgaggattgtca
tgggacagccacaagaaattagacattgaaagatttacaaaggttcatgc
gtcg
gaattctgtgattgatacattgtgtgactacacacaaatatttgaaatta
tgcctgaatcaaaattaagtttatttaatgattaagttttcagataacat
tatgcaatttatatgactgggagaaacgattgcatagcattaatgagttc
tatgatttgagtctccagattcagggcgtgccatggaggaagcgtgttgt
tgacaagcaggaaaggcttcagaagctgggaatcggtctgcattgtgttc
actgataactagcaatcacaggaagtccagtgccaaatgaggcaggagca
gaaacagaacaataggactaagctgattaatgttttcaaaagatggattg
caaattacaggatgggaatgttgcttcttgacaaggtgctctattttcaa
caagttctgaaacttatgtacagtgtgacacagtgatatccgtggatatg
acccactgagcagatatgaagaagcatactgaagaatgtaagtgttagaa
cacagtgctcagtagcttgaaatgccactcctgaccctcctcggtatggg
gcttttatctaacttctcagggtctcagacttgtcattagggaacaaagt
attttaaggcataatattaactgtagacagtttataaacttatgccagag
agagcaaatgcagaaaaagttctgacagcattaagctattcagaaaataa
ttttttttttaaattacaggcataattttttttactataaagtttcagaa
cattgaagtaattattgttaatttaatgttgtaaacacaatttatgcatt
gagtaaaaaaattatgcattgagtaaaactattaaagaagaaataaaatt
gatctgtgggctttgcacaaaaatataaactgtattattagaagtggctg
gcatgaggaattggagttacagtcattttacttcttagcttctaagtcat
gaagaaaggcagtaatgacgttctgtaatactgaaagtaagcttttgaat
gaaaggggtattcttacacatctacctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_12150755_12151784
seq2: B6Ng01-089J07.g_70_1094 (reverse)

seq1  GTAGATGTGTAAGAATACCCCTATCATTCAAAAGCTTACTTTCAGTATTA  50
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTAGATGTGTAAGAATACCCCTTTCATTCAAAAGCTTACTTTCAGTATTA  50

seq1  CAGAACGTCATTTACTTGCCTTTCTTCATGACTTAG-AGCTAAGAAGTAA  99
      |||||||||| |||| |||||||||||||||||||| |||||||||||||
seq2  CAGAACGTCA-TTAC-TGCCTTTCTTCATGACTTAGAAGCTAAGAAGTAA  98

seq1  AATGACTTGTAACTCCAATTCCTCATGCCAGCCACTTCTAATAATACAGT  149
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAC-TGTAACTCCAATTCCTCATGCCAGCCACTTCTAATAATACAGT  147

seq1  TTATAATTTTCTGTGCAAAGCCCACAGATCAATTTTATTTTCTTCTTTAA  199
      |||||  ||| |||||||||||||||||||||||||| ||||||||||||
seq2  TTATA--TTTTTGTGCAAAGCCCACAGATCAATTTTA-TTTCTTCTTTAA  194

seq1  TAGTTTTACTCAATGCATAAATTTTTTTACTCAATGCATAAATTGTGTTT  249
      |||||||||||||||||| |||||||||||||||||||||||||||| ||
seq2  TAGTTTTACTCAATGCAT-AATTTTTTTACTCAATGCATAAATTGTG-TT  242

seq1  TACAACATTAAATTAACAATAATTACTTCAATGTTCTGAAACTTTATAGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACATTAAATTAACAATAATTACTTCAATGTTCTGAAACTTTATAGT  292

seq1  -AAAAAAATTATGCCTGTAATTT-AAAAAAAAATTATTTTCTGAATAGCT  347
       |||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAAAAAAATTATGCCTGTAATTTAAAAAAAAAATTATTTTCTGAATAGCT  342

seq1  TAATGCTGTCAGAACTTTTTCTGCATTTGCTCTCTCTGGCATAAGTTTAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTGTCAGAACTTTTTCTGCATTTGCTCTCTCTGGCATAAGTTTAT  392

seq1  AAACTGTCTACAGTTAATATTATGCCTTAAAATACTTTGTTCCCTAATGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTCTACAGTTAATATTATGCCTTAAAATACTTTGTTCCCTAATGA  442

seq1  CAAGTCTGAGACCCTGAGAAGTTAGATAAAAGCCCCATACCGAGGAGGGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTGAGACCCTGAGAAGTTAGATAAAAGCCCCATACCGAGGAGGGT  492

seq1  CAGGAGTGGCATTTCAAGCTACTGAGCACTGTGTTCTAACACTTACATTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGTGGCATTTCAAGCTACTGAGCACTGTGTTCTAACACTTACATTC  542

seq1  TTCAGTATGCTTCTTCATATCTGCTCAGTGGGTCATATCCACGGATATCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTATGCTTCTTCATATCTGCTCAGTGGGTCATATCCACGGATATCA  592

seq1  CTGTGTCACACTGTACATAAGTTTCAGAACTTGTTGAAAATAGAGCACCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCACACTGTACATAAGTTTCAGAACTTGTTGAAAATAGAGCACCT  642

seq1  TGTCAAGAAGCAACATTCCCATCCTGTAATTTGCAATCCATCTTTTGAAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAGAAGCAACATTCCCATCCTGTAATTTGCAATCCATCTTTTGAAA  692

seq1  ACATTAATCAGCTTAGTCCTATTGTTCTGTTTCTGCTCCTGCCTCATTTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAATCAGCTTAGTCCTATTGTTCTGTTTCTGCTCCTGCCTCATTTG  742

seq1  GCACTGGACTTCCTGTGATTGCTAGTTATCAGTGAACACAATGCAGACCG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGGACTTCCTGTGATTGCTAGTTATCAGTGAACACAATGCAGACCG  792

seq1  ATTCCCAGCTTCTGAAGCCTTTCCTGCTTGTCAACAACACGCTTCCTCCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAGCTTCTGAAGCCTTTCCTGCTTGTCAACAACACGCTTCCTCCA  842

seq1  TGGCACGCCCTGAATCTGGAGACTCAAATCATAGAACTCATTAATGCTAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACGCCCTGAATCTGGAGACTCAAATCATAGAACTCATTAATGCTAT  892

seq1  GCAATCGTTTCTCCCAGTCATATAAATTGCATAATGTTATCTGAAAACTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCGTTTCTCCCAGTCATATAAATTGCATAATGTTATCTGAAAACTT  942

seq1  AATCATTAAATAAACTTAATTTTGATTCAGGCATAATTTCAAATATTTGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTAAATAAACTTAATTTTGATTCAGGCATAATTTCAAATATTTGT  992

seq1  GTGTAGTCACACAATGTATCAATCACAGAATTC  1030
      |||||||||||||||||||||||||||||||||
seq2  GTGTAGTCACACAATGTATCAATCACAGAATTC  1025