BAC Information

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BAC

Clone NameB6Ng01-098N23
Chromosome3 (Build37)
Map Location 77,431,352 - 77,431,966
singlet/doubletsinglet
Overlap genenone
Upstream geneFstl5, LOC100041625, LOC100041635, Dnmt3a-ps1
Downstream geneEG626461, LOC667526, LOC626479, LOC100041691
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098N23.bB6Ng01-098N23.g
ACCDH908827DH908828
length615101
definitionDH908827|Mus musculus domesticus DNA, BAC clone: B6Ng01-098N23, 5' end.DH908828|Mus musculus domesticus DNA, BAC clone: B6Ng01-098N23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattttcctagtctctgaagtccatttctagtgttgacacacct
gatcatgagtgggaggtggtgttggggcattcaatgttggttttcggttc
tagatgacctttataatcatgcaaccctggacttagtgggttccatgact
ttccattccccttaccagtacaaaaatcatactcagagaattcccttaaa
atatttacagcaattatctacacttgcatacaattagaacagatctgaag
agactaggaaaacagaaaggaaaccaaatgataaagagctaaataacata
aaaatgatttgtttcctgacatgagtttgctagcattctaccaactatat
aaggtaaaaatgaaagatggtcatggcttcacttttgtggcttttaaggc
tggcatacataaaaaaaaaatagggtaatatactcttcaaagttgctgtt
ccagcaggaaggagaggaggaatggatgtaagcaaggtaaattcccagta
tgcacacacacacacacacacacacacacacacacacacacacacacaca
catatatatatatatatatatatatatatatatatatatatatatatata
tatatatatatgtat
tcagccctaaacaggacatgagtccatctaagactcagtcaacaacatag
aattgggggcaaagagaatgtaagatctggataatgggggggaggggtgt
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77431352_77431966
seq2: B6Ng01-098N23.b_50_664

seq1  GAATTCAATTTTCCTAGTCTCTGAAGTCCATTTCTAGTGTTGACACACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTTTCCTAGTCTCTGAAGTCCATTTCTAGTGTTGACACACCT  50

seq1  GATCATGAGTGGGAGGTGGTGTTGGGGCATTCAATGTTGGTTTTCGGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATGAGTGGGAGGTGGTGTTGGGGCATTCAATGTTGGTTTTCGGTTC  100

seq1  TAGATGACCTTTATAATCATGCAACCCTGGACTTAGTGGGTTCCATGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGACCTTTATAATCATGCAACCCTGGACTTAGTGGGTTCCATGACT  150

seq1  TTCCATTCCCCTTACCAGTACAAAAATCATACTCAGAGAATTCCCTTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTCCCCTTACCAGTACAAAAATCATACTCAGAGAATTCCCTTAAA  200

seq1  ATATTTACAGCAATTATCTACACTTGCATACAATTAGAACAGATCTGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTACAGCAATTATCTACACTTGCATACAATTAGAACAGATCTGAAG  250

seq1  AGACTAGGAAAACAGAAAGGAAACCAAATGATAAAGAGCTAAATAACATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAGGAAAACAGAAAGGAAACCAAATGATAAAGAGCTAAATAACATA  300

seq1  AAAATGATTTGTTTCCTGACATGAGTTTGCTAGCATTCTACCAACTATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGATTTGTTTCCTGACATGAGTTTGCTAGCATTCTACCAACTATAT  350

seq1  AAGGTAAAAATGAAAGATGGTCATGGCTTCACTTTTGTGGCTTTTAAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAAAAATGAAAGATGGTCATGGCTTCACTTTTGTGGCTTTTAAGGC  400

seq1  TGGCATACATAAAAAAAAAATAGGGTAATATACTCTTCAAAGTTGCTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATACATAAAAAAAAAATAGGGTAATATACTCTTCAAAGTTGCTGTT  450

seq1  CCAGCAGGAAGGAGAGGAGGAATGGATGTAAGCAAGGTAAATTCCCAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGGAAGGAGAGGAGGAATGGATGTAAGCAAGGTAAATTCCCAGTA  500

seq1  TGCACACACACACACACACACACACACACACACACACACACACACACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACACACACACACACACACACACACACACACACACACACACACACA  550

seq1  CATATATATATATATATATATATATATATATATATATATATATATATATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATATATATATATATATATATATATATATATATATATATATATATA  600

seq1  TATGTATATATGTAT  615
      ||| |||||||||||
seq2  TATATATATATGTAT  615