BAC Information

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BAC

Clone NameB6Ng01-101M22
Chromosome3 (Build37)
Map Location 41,059,127 - 41,059,660
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101M22.bB6Ng01-101M22.g
ACCDH910879DH910880
length9451,026
definitionDH910879|Mus musculus domesticus DNA, BAC clone: B6Ng01-101M22, 5' end.DH910880|Mus musculus domesticus DNA, BAC clone: B6Ng01-101M22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattatatatattggatattagtcccctatctgatttaggatatg
taaagatcctttcccaatctgttggtggactttttgtcttattgacagtg
tattttgccttacagaagctttgcagtttcatgaggtcccatttgtcaat
tctcgatcttacagcacaagccattgctgctctattcaggaatttttccc
ctgtgcctatatcttcgaggattttccccactttctcccctataagtttc
agtgtttctgattttatgtggagctccttgatccacttagattttacttt
agtacaaggagataggaatggaccaattcgaattcttctacatgataacc
accagttgtgccagcaccatttgttgaaaatgctgtctttcttccactgg
atggttttagctcccttgacgaagatcaactgaccataggtgtgtgggtt
catttctgggtcttcaattctgttccattggtctacttgtctatcactat
accagtaccatgtagtttttatcacaattgctctgtagtaaagctttagg
tcagacatcgtgattccaccagaggttttttttttttatcctttagaaga
gtttttactatgctttggttttttgttatttcaggtgaattttcagaatg
ctctttctaattcgttgaagaattgagatggaattttgatggggattgca
ttaaatccgggtcttgcttttctggtgtgttggggtgcccaggactaggt
ggggtggagtgctgtgttctgatgatggtgtgtggtcatgatttctgtta
gtaggattcttacatttgcctttcgccatctggtaatctctgaagctagt
tgttatagttgtctctggttagagcttgttcctcaggtgattatgttagc
ctctatcagcatacctgggagactagatctctccttagcttcagt
gaattcctgatctttccaagacttttatcacgaaagggtattgaattttt
tcataggctttctcggcatctaatgagaagatcatgtggtttttgtcttt
gagtttgtttacatagtggattacattgatggatttctgcatcgtaaagt
attcctgcatccctggaatgaagcctggttgatcaggatggatgattgtt
ttgatgtgttcttggattcgtttagcaacattttttaaaattgggaattt
atttcatttacatttccaatgctgtcccaaaagtcccccacacgatcccc
cacacgctcccccacacgctcccccacccacccattcccacttcttggcc
ctgtcattcccctgtactgagggttagcaagaattttattgagtattttt
gcatcgacattcataggggaaaatggtctgaagttctctatcgttgttgg
gtctttatgtggtttaggtatcagagtaattgtggctttgtagaatgaat
ttggtagagtaccctctgtttctattttttggaatagtttgagaagaact
ggaattagatcttctttgaaggtctgatagaagtctgaactaaacccatc
tggtccttgactctttttggtagggagactactaatgactgcttctattt
ctttaggagatatagaactgtttaggtcattaatctgatcccgatttaac
ttttgtacctggtatctgtctaaaaaattgtcgatttcatccaggttttc
cagtttggtagaaggatctgatggtgtttggatttcctcaggttctgttg
ttatgtctcccttttcatttctgattttgttaattaggatgctgtccctg
tgccctctcatgagtctggctaagggtttatctatctgttgattttgcaa
agtaccagcttctcttttggtgatttttgaatagttctttgtttctactt
gggtggattcctcctgagtttgaatattcctgcatctactctcttggggg
atttgctttccttggttctagagcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059127_41059660
seq2: B6Ng01-101M22.b_60_594 (reverse)

seq1  GCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGTG  50
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GCTTTACTACAGAGCAATTGTGATAAAAACTACATGGTACTGGTATAGTG  50

seq1  ACAGACAAGCAGACCAATGGAATAGAATTGAAGACTCAGAAACGAATCCA  100
      | ||||||| |||||||||||| |||||||||||| |||||| ||| |||
seq2  ATAGACAAGTAGACCAATGGAACAGAATTGAAGACCCAGAAATGAACCCA  100

seq1  CACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTG  150
      |||||||||||||| |||||||||| ||||||||||||||||||||||||
seq2  CACACCTATGGTCAGTTGATCTTCGTCAAGGGAGCTAAAACCATCCAGTG  150

seq1  GAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTAT  200
      ||| |||||||||||||||||||||||||||||||||||||||| |||||
seq2  GAAGAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTGGTTAT  200

seq1  CATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAGGTC  250
      ||||||||||||| ||||||| |||| ||||||||||||||||||| || 
seq2  CATGTAGAAGAATTCGAATTGGTCCATTCCTATCTCCTTGTACTAAAGTA  250

seq1  AAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACTGAAACT  300
      |||||||||||||||||||| | |||||||||| |||| |||||||||||
seq2  AAATCTAAGTGGATCAAGGAGCTCCACATAAAATCAGAAACACTGAAACT  300

seq1  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGGAAA  350
      ||||| ||||||||||||||||| ||| |||||||| | |||||||||||
seq2  TATAGGGGAGAAAGTGGGGAAAATCCTCGAAGATATAGGCACAGGGGAAA  350

seq1  AATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATAGAC  400
      |||||||| ||||| |||||||||||||||||||||||| |||||| |||
seq2  AATTCCTGAATAGAGCAGCAATGGCTTGTGCTGTAAGATCGAGAATTGAC  400

seq1  AAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACACCGT  450
      |||||||||||||||||||||||||||||||| ||||||||| |||| ||
seq2  AAATGGGACCTCATGAAACTGCAAAGCTTCTGTAAGGCAAAATACACTGT  450

seq1  CAATAAGACAAAAAG-GCACCAACAGATTGGGAAAGGATCTTTACCTATC  499
      |||||||||||||||  |||||||||||||||||||||||||||| ||||
seq2  CAATAAGACAAAAAGTCCACCAACAGATTGGGAAAGGATCTTTACATATC  500

seq1  CTAAATCAGATAGGGGACTAATATCCAATATATAT  534
      |||||||||||||||||||||||||||||||||||
seq2  CTAAATCAGATAGGGGACTAATATCCAATATATAT  535