BAC Information

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BAC

Clone NameB6Ng01-102A23
Chromosome3 (Build37)
Map Location 158,647,555 - 158,648,588
singlet/doubletsinglet
Overlap genenone
Upstream geneAnkrd13c, Sfrs11, Lrrc40, Lrrc7, LOC100041008, LOC668905
Downstream geneLOC668907, Depdc1a, Rpe65, Gpr177
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102A23.bB6Ng01-102A23.g
ACCDH911058DH911059
length7601,037
definitionDH911058|Mus musculus domesticus DNA, BAC clone: B6Ng01-102A23, 5' end.DH911059|Mus musculus domesticus DNA, BAC clone: B6Ng01-102A23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaacagaagaatttctaataactggaaaacacttaaagaaatg
tttccactctgagagtatatcttagcccagttagaacagctaagataaaa
actcaagtgacagcacatgctggtgagactgtagagcaagtagagagctc
cttcattgctggtgatagtgcaaacttgtacaaacactttggaaatcaat
taggcagtttctcagaaaactggaaattattctacctcaagacacagcta
tattactttgaagcatatacctaaatgttgctccaccatactacaagtac
acttgctcaactatggtcatagtaaccttattcataatagtcccaaacag
gaaaccatcctgatatccatcgactgaagaatggataaactgtggttcat
ttacacaatgggatactactcagctattcaaaacaaagacatcatcattt
tgcagacaaatgaatggaactagaaaatatcattctgagtgaggtaactc
agacccaaaagggcatgcatggtatgtattcactaataagttgatattag
acaaaaaaagtaaagaatactcaggatacaatccacaggacgcaatgagg
ctaacaagctaaagggtccaagtgaggatgcctcagtctcacttgggagg
gagaagaaagcaatcacaagagagaggagggagggagggttctggttggt
gaaggggacaaggaacagaagaggggaataagatctgacatgagcggggg
gtgggggtgg

gaattctggtgccaggctaagaatcaatgaatttttttccttatcttgta
tatttctctatttctgttaacagcagctttctgtaataaaaactgggcct
cttatagtgttataagtcagttgcaaactagtgagtgtagtctttactgg
gacatcactttgttatgttatacagaaaatgttcttagtactgattttgc
tttatcttgtctaatctatcagcaatttcaggaggaaactgattgtacgg
gtcctagtcagttttttagcccgagtttatattctgattccttagcagaa
taatgtatacttcatgatcaattctacagaatatcctagtctggctgtgt
ataagccagacagatcaagatttactacacacacacacacacacacatga
atgaatattgcctccgatgattttcttgtttttgttcctgtagagtcact
ctgaatcagcataattataattcaggggtctaggctgattgttaaatatg
ctgtggtttgtgagagagatgagcttcagaatatttttatatcatattct
tcaaataacaattattttgttcttgagataagcaaagtttgtctacagag
aatattcaagtcagtacctaacatacctgttgccatggtctatccttatt
ggcttggcgaaagcagagtaaatctgacattctttgtttattaaatggaa
attttctttactataaaaatattggagatagggtgagaatctgttttgtt
tttaaaggcatgacctcaaatgttatgttttataagatctctgctttaag
ttagattaattctaagacatattacagtgtatgatggaatccaaaaaggc
ttacgattcataaaaatgtaattggaatacaacatctttctcccccagct
attcgaactggtatttgtagtctttttttcatgtaaataagaatgggtgg
tataatgtcctttttagactagagctaaatacaaaagatggccaaatggt
ggtgtaagtggttgccttagacctaattgcaagaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_158647555_158648588
seq2: B6Ng01-102A23.g_68_1104

seq1  GAATTCTGGTGCCAGGCTAAGAATCAATGAATTTTTTTCCTTATCTTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGTGCCAGGCTAAGAATCAATGAATTTTTTTCCTTATCTTGTA  50

seq1  TATTTCTCTATTTCTGTTAACAGCAGCTTTCTGTAATAAAAACTGGGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTCTATTTCTGTTAACAGCAGCTTTCTGTAATAAAAACTGGGCCT  100

seq1  CTTATAGTGTTATAAGTCAGTTGCAAACTAGTGAGTGTAGTCTTTACTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGTGTTATAAGTCAGTTGCAAACTAGTGAGTGTAGTCTTTACTGG  150

seq1  GACATCACTTTGTTATGTTATACAGAAAATGTTCTTAGTACTGATTTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCACTTTGTTATGTTATACAGAAAATGTTCTTAGTACTGATTTTGC  200

seq1  TTTATCTTGTCTAATCTATCAGCAATTTCAGGAGGAAACTGATTGTACGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTTGTCTAATCTATCAGCAATTTCAGGAGGAAACTGATTGTACGG  250

seq1  GTCCTAGTCAGTTTTTTAGCCCGAGTTTATATTCTGATTCCTTAGCAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAGTCAGTTTTTTAGCCCGAGTTTATATTCTGATTCCTTAGCAGAA  300

seq1  TAATGTATACTTCATGATCAATTCTACAGAATATCCTAGTCTGGCTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTATACTTCATGATCAATTCTACAGAATATCCTAGTCTGGCTGTGT  350

seq1  ATAAGCCAGACAGATCAAGATTTACTACACACACACACACACACACATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCCAGACAGATCAAGATTTACTACACACACACACACACACACATGA  400

seq1  ATGAATATTGCCTCCGATGATTTTCTTGTTTTTGTTCCTGTAGAGTCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATATTGCCTCCGATGATTTTCTTGTTTTTGTTCCTGTAGAGTCACT  450

seq1  CTGAATCAGCATAATTATAATTCAGGGGTCTAGGCTGATTGTTAAATATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATCAGCATAATTATAATTCAGGGGTCTAGGCTGATTGTTAAATATG  500

seq1  CTGTGGTTTGTGAGAGAGATGAGCTTCAGAATATTTTTATATCATATTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTTTGTGAGAGAGATGAGCTTCAGAATATTTTTATATCATATTCT  550

seq1  TCAAATAACAATTATTTTGTTCTTGAGATAAGCAAAGTTTGTCTACAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAACAATTATTTTGTTCTTGAGATAAGCAAAGTTTGTCTACAGAG  600

seq1  AATATTCAAGTCAGTACCTAACATACCTGTTGCCATGGTCTATCCTTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCAAGTCAGTACCTAACATACCTGTTGCCATGGTCTATCCTTATT  650

seq1  GGCTTGGCGAAAGCAGAGTAAATCTGACATTCTTTGTTTATTAAATGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGGCGAAAGCAGAGTAAATCTGACATTCTTTGTTTATTAAATGGAA  700

seq1  ATTTTCTTTACTATAAAAATATTGGAGATAGGGTGAGAATCTGTTTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTTACTATAAAAATATTGGAGATAGGGTGAGAATCTGTTTTGTT  750

seq1  TTTAAAGGCATGACCTCAAATGTTATGTTTTATAAGATCTCTGCTTTAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGGCATGACCTCAAATGTTATGTTTTATAAGATCTCTGCTTTAAG  800

seq1  TTAGATTAATTCTAAGACATATTACAGTGTATGATGGAATCCAAAAAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTAATTCTAAGACATATTACAGTGTATGATGGAATCCAAAAAGGC  850

seq1  TTACGATTCATAAAAATGTAATTGGAATACAACATCTTTCTCCCCCAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGATTCATAAAAATGTAATTGGAATACAACATCTTTCTCCCCCAGCT  900

seq1  ATTCGAACTGGTATTTGTAGTC-TTTTTTCATGTAAATAAGAATGGGTGG  949
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATTCGAACTGGTATTTGTAGTCTTTTTTTCATGTAAATAAGAATGGGTGG  950

seq1  TATAATGTCCTTTTTAGACTAGAGCTATATACAAAAGATGGCAAAATG--  997
      ||||||||||||||||||||||||||| |||||||||||||| |||||  
seq2  TATAATGTCCTTTTTAGACTAGAGCTAAATACAAAAGATGGCCAAATGGT  1000

seq1  TGTGTAAAGTGGTTGGCATAGACCCTAATGC-AGAAGA  1034
       |||| ||||||||| | ||||||  | ||| ||||||
seq2  GGTGT-AAGTGGTTGCCTTAGACCTAATTGCAAGAAGA  1037


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