BAC Information

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BAC

Clone NameB6Ng01-105A04
Chromosome3 (Build37)
Map Location 14,169,783 - 14,170,905
singlet/doubletsinglet
Overlap gene0710005M24Rik
Upstream geneLOC100039823, LOC100039861, LOC100041679, LOC100041667, LOC100039882
Downstream geneEG622229, LOC668062, Slc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785, Car3, Car2, EG634323, LOC100039985
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105A04.bB6Ng01-105A04.g
ACCDH913146DH913147
length1,124614
definitionDH913146|Mus musculus domesticus DNA, BAC clone: B6Ng01-105A04, 5' end.DH913147|Mus musculus domesticus DNA, BAC clone: B6Ng01-105A04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgaagtcattatttttaatagctgagtagtacccttgtgtca
atgaatcacatttctgaccacataactcaaaagtgggacaaagaatattc
tgtcccattgttctttgcctctacccacagcagaggtcacaaactattgt
ccctgagacctacatgtctgtgcttcctctccattccacaacctgatctg
aattccccttttcttcctctctgtccaggaaatcctgcccttttccagcg
attagcttctgccctctttattgaccccaatcaagagacaattagggaac
ctctgcctacatgactgcacagagcagttaaatgtgtgaagttataaagt
tcttaataattttagtattgattagtatttggtctggagctaaaacaact
taaaacaataataataagattattacacagacataccataccacaccaca
ctacattactatcagaatggctgcatatcaatgaagtccaagttgaaggt
tttgcttaggttctcatactttccctatgccccatcttcttttcacctaa
tctcatatgttcatatagatcatctgtgcccactagacctccctgtctct
ttctattccacccataactcgaaaaaaatgggaatctttgacctgggtct
aaagtaaacaagacattttgctttatgaaacaaggatcaaagaataatga
ttggccaaaatatgcctcattggttgttatttacaacaaatttgaatatg
tttatatggcgtattatttattttcccaacactactaagaaatgtccagt
actgggtaacattataataaaatctagctcacagttttaaaggttctagg
gcatggcctcagatccacagtgttcctaatatggcaaaatctctatggaa
aatgtcataggagagttacagacttttgcatattcagagagcaccatggt
gagacaattcagacagagaaattgcggaagaggtatgcctatgctccttc
ttttcatgaaaacacccttgaaagagttatcctcaggctcccatgaaaac
tacaacaaaccccctctagattgatcctcaggacagattcactagctaag
aattacagctcacaaagcactctg
gaattcccgatctttccaagacttttaacatgaagggatgttgaatttag
tcaaatgatttttcagcatctaataaaatgatcatgtggtattttttttt
tttgagtttgtttatgtagtggattacattgatggatttccatatactga
accaatcttgcatccctgggataaagcctacttgaccatggtgaatgatc
gttttaatatgttcttgaattcatttttcaagaatgttatcgagtatttt
tgcattgatattcataagggaaattggtctgaagttctctttctttgttg
ggtctttggttttggtatcagtgtagctgtcacttcatagaacaaattgg
ttagtgcttcttttgtttctattttgtgaaatattttgaagtgtattggt
atcatgtcttctttgaaggtctgacagaattttgcactaaacccttctgg
cccagggctttttttggttgggagatacttaagtctgcttctatttctat
aggagttttgggactgtttagacggtttaactgatcatgatttaactttg
ataccttgtatctgtctaaaaattcttcatttcataacaattttccaggt
ttgttgagtatagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_14169783_14170905
seq2: B6Ng01-105A04.b_46_1169

seq1  GAATTCCATGAAGTCATTATTTTTAATAGCTGAGTAGTACCCTTGTGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGAAGTCATTATTTTTAATAGCTGAGTAGTACCCTTGTGTCA  50

seq1  ATGAATCACATTTCTGACCACATAACTCAAAAGTGGGACAAAGAATATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCACATTTCTGACCACATAACTCAAAAGTGGGACAAAGAATATTC  100

seq1  TGTCCCATTGTTCTTTGCCTCTACCCACAGCAGAGGTCACAAACTATTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCATTGTTCTTTGCCTCTACCCACAGCAGAGGTCACAAACTATTGT  150

seq1  CCCTGAGACCTACATGTCTGTGCTTCCTCTCCATTCCACAACCTGATCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGACCTACATGTCTGTGCTTCCTCTCCATTCCACAACCTGATCTG  200

seq1  AATTCCCCTTTTCTTCCTCTCTGTCCAGGAAATCCTGCCCTTTTCCAGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCCCTTTTCTTCCTCTCTGTCCAGGAAATCCTGCCCTTTTCCAGCG  250

seq1  ATTAGCTTCTGCCCTCTTTATTGACCCCAATCAAGAGACAATTAGGGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCTTCTGCCCTCTTTATTGACCCCAATCAAGAGACAATTAGGGAAC  300

seq1  CTCTGCCTACATGACTGCACAGAGCAGTTAAATGTGTGAAGTTATAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTACATGACTGCACAGAGCAGTTAAATGTGTGAAGTTATAAAGT  350

seq1  TCTTAATAATTTTAGTATTGATTAGTATTTGGTCTGGAGCTAAAACAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATAATTTTAGTATTGATTAGTATTTGGTCTGGAGCTAAAACAACT  400

seq1  TAAAACAATAATAATAAGATTATTACACAGACATACCATACCACACCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAATAATAATAAGATTATTACACAGACATACCATACCACACCACA  450

seq1  CTACATTACTATCAGAATGGCTGCATATCAATGAAGTCCAAGTTGAAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTACTATCAGAATGGCTGCATATCAATGAAGTCCAAGTTGAAGGT  500

seq1  TTTGCTTAGGTTCTCATACTTTCCCTATGCCCCATCTTCTTTTCACCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTAGGTTCTCATACTTTCCCTATGCCCCATCTTCTTTTCACCTAA  550

seq1  TCTCATATGTTCATATAGATCATCTGTGCCCACTAGACCTCCCTGTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATATGTTCATATAGATCATCTGTGCCCACTAGACCTCCCTGTCTCT  600

seq1  TTCTATTCCACCCATAACTCGAAAAAAATGGGAATCTTTGACCTGGGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTCCACCCATAACTCGAAAAAAATGGGAATCTTTGACCTGGGTCT  650

seq1  AAAGTAAACAAGACATTTTGCTTTATGAAACAAGGATCAAAGAATAATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAAACAAGACATTTTGCTTTATGAAACAAGGATCAAAGAATAATGA  700

seq1  TTGGCCAAAATATGCCTCATTGGTTGTTATTTACAACAAATTTGAATATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCAAAATATGCCTCATTGGTTGTTATTTACAACAAATTTGAATATG  750

seq1  TTTATATGGCGTATTA-TTATTTTCCCAACACTACTAAGAAATGTCCAGT  799
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTTATATGGCGTATTATTTATTTTCCCAACACTACTAAGAAATGTCCAGT  800

seq1  ACTGGGTAACATTATAATAAAATCTAGCTCACAGTTTTAAAGGTTCTAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTAACATTATAATAAAATCTAGCTCACAGTTTTAAAGGTTCTAGG  850

seq1  GCATGGCCTCAGATCCACAGTGTCCTAAATATGGCAAAATCCTTATGGAA  899
      ||||||||||||||||||||||| |  ||||||||||||||  |||||||
seq2  GCATGGCCTCAGATCCACAGTGTTCCTAATATGGCAAAATCTCTATGGAA  900

seq1  AATGTCATAGGAGAGTTACAGACTTTTGCATTATTCAGAGAGCA-CATGG  948
      |||||||||||||||||||||||||||||| ||||||||||||| |||||
seq2  AATGTCATAGGAGAGTTACAGACTTTTGCA-TATTCAGAGAGCACCATGG  949

seq1  TGAGAC-ATTCAGACAGAGGAATTGCGGAAGAGGTATGCTTATGCTTCTT  997
      |||||| |||||||||||| ||||||||||||||||||| |||||| |||
seq2  TGAGACAATTCAGACAGAGAAATTGCGGAAGAGGTATGCCTATGCTCCTT  999

seq1  CTTTTCATGAAAACACCCTTGAAAGAGTTAT-CTCAGGCTCCCATGAAAA  1046
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTTTTCATGAAAACACCCTTGAAAGAGTTATCCTCAGGCTCCCATGAAAA  1049

seq1  CTACCACAAA-CCCCTCTAGATGTGATCCTCAGGACAGATTCACTAGCTA  1095
      |||| ||||| ||||||||||| |||||||||||||||||||||||||| 
seq2  CTACAACAAACCCCCTCTAGAT-TGATCCTCAGGACAGATTCACTAGCT-  1097

seq1  AAGATTTACAAGCTCACAAAGCACTCTG  1123
      |||| |||| ||||||||||||||||||
seq2  AAGAATTAC-AGCTCACAAAGCACTCTG  1124