BAC Information

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BAC

Clone NameB6Ng01-107L02
Chromosome3 (Build37)
Map Location 41,058,966 - 41,059,737
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107L02.bB6Ng01-107L02.g
ACCDH915086DH915087
length9911,140
definitionDH915086|Mus musculus domesticus DNA, BAC clone: B6Ng01-107L02, 5' end.DH915087|Mus musculus domesticus DNA, BAC clone: B6Ng01-107L02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccccaacttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatactggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatcttttttttgtct
ttttgtcttattgacggtgtcttttgccttgcagaagctttgcagtttca
tcaggtcccatttgtcaatcctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtgctcatatcttcgaggcttttccccac
tttctcctctataagtttcaggtctctggttttatgtggagctcctggat
ccacttagatttgaccttagtacaaggagataggaatggatcaattctca
ttcttctacatgataaccaccagttgtgccagcaccatttgttgaaaatg
ctgtcttttttccactggatggttttagatcccttgtcgaagttcaagtg
accataggtgtgtggttttatttctgggtcttcaattctattccattggt
ctacttttctgtcattataccagtaccatgctgtttttatcacaattgct
ctgtaataaagctttaggtcaggcatggtgattccaccagaggttctttt
atccttgagaagagtttttgctagcctaggtttttttgttattccagatg
aatttgcagattgttctttctaattcgttgaagaattgaattggaatttt
gatggggatttcattgaatctatagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatcttttaatctt
ctgggaatttttaaattttttgaaacatgaaaccatttttcataatgggt
gtgtatgtgcatatttagcatctgcttacatttcctcttattgagaatag
ttttatttttcacatttaaattatgatttccctcccaatct
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaatactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaattagtctggcggttcctca
gaaaactggacatagtactaccgaaggatccagcaatacctctcctgggc
atatatccaggagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaataatgaatttatgaaattcctagccaa
atggatggacctggagggaatcatcctgagtgaagtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgtccctccttagacttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactattccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcataagggctcca
tgagagctagagaagtagccaggagctaaagggatctgcaccctatagtg
acacatatgactacagtacccgagctctgactctagctgcatattattca
agatgcctagtcgcatcactgaagaagcatgactgccaacttatatgccc
agataggactcaggcaaagggaagtggtggacgggaatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41058966_41059737
seq2: B6Ng01-107L02.b_48_820 (reverse)

seq1  TACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGA  50
      || |||||||||| |||||||||||||||||||| |||||||||||||||
seq2  TATAGATTCAATGAAATCCCCATCAAAATTCCAATTCAATTCTTCAACGA  50

seq1  ATTTGAAAGAGCAATCTGCAAATTCATCTGGAATAAC-AAAAAACCTAGG  99
      ||| |||||| |||||||||||||||||||||||||| ||||||||||||
seq2  ATTAGAAAGAACAATCTGCAAATTCATCTGGAATAACAAAAAAACCTAGG  100

seq1  ATAGCAAAAACTCTTCTCAAGGATAACAGAACCTCTGGTGGAATCACCAT  149
       ||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTAGCAAAAACTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCAT  150

seq1  GCCTGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGT  199
      |||||||||||||||||| ||||||||||||||||||||||| |||||||
seq2  GCCTGACCTAAAGCTTTATTACAGAGCAATTGTGATAAAAACAGCATGGT  200

seq1  ACTGGTATAGTGACAGACAAGCAGACCAATGGAATAGAATTGAAGACTCA  249
      ||||||||| ||||||| ||| ||||||||||||||||||||||||| ||
seq2  ACTGGTATAATGACAGAAAAGTAGACCAATGGAATAGAATTGAAGACCCA  250

seq1  GAAACGAATCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAA  299
      ||||  || |||||||||||||||||||||| ||||||||||||| ||||
seq2  GAAATAAAACCACACACCTATGGTCACTTGAACTTCGACAAGGGATCTAA  300

seq1  AACCATCCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACA  350

seq1  ACTGGTTGTTATCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCT  399
      |||||| ||||||||||||||||||| ||||||||||| |||||||||||
seq2  ACTGGTGGTTATCATGTAGAAGAATGAGAATTGATCCATTCCTATCTCCT  400

seq1  TGTACTAAGGTCAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGA  449
      ||||||||||||||||||||||||||| |||| | |||||||||||||||
seq2  TGTACTAAGGTCAAATCTAAGTGGATCCAGGAGCTCCACATAAAACCAGA  450

seq1  GACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGG  499
      ||| ||||||||||||||||||||||||||||||||||| ||||||||| 
seq2  GAC-CTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTCGAAGATATGA  499

seq1  TCACAGGGGAAAAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGA  549
       ||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GCACAGGGGAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGA  549

seq1  TTGAGAATAGACAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGC  599
      | ||| || |||||||||||||| ||||||||||||||||||||||||||
seq2  TCGAGGATTGACAAATGGGACCTGATGAAACTGCAAAGCTTCTGCAAGGC  599

seq1  AAAAGACACCGTCAATAAGACAAAAAGGC-ACCAACAGATTGGGAAAGGA  648
      ||||||||||||||||||||||||||| | |  || ||||||||||||||
seq2  AAAAGACACCGTCAATAAGACAAAAAGACAAAAAAAAGATTGGGAAAGGA  649

seq1  TCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAATATATATCAA  698
      ||||||||||||||||||||||||||||||||||||||| ||||||| ||
seq2  TCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAGTATATATAAA  699

seq1  GAACTCAAGAAGGTGGATTCCAGAAAATCAAATAACCCCATTAAAAAATG  748
      ||||||||||||||||| ||||||||||||||||||||||||||||  ||
seq2  GAACTCAAGAAGGTGGACTCCAGAAAATCAAATAACCCCATTAAAAGTTG  749

seq1  GGGCTCAGAGCTAAACAAAGAATT  772
      ||||||||||||||||||||||||
seq2  GGGCTCAGAGCTAAACAAAGAATT  773