BAC Information

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BAC

Clone NameB6Ng01-111H13
Chromosome3 (Build37)
Map Location 63,118,267 - 63,119,398
singlet/doubletsinglet
Overlap geneMme
Upstream gene4631416L12Rik, Dhx36, Gpr149, LOC676984, LOC666967
Downstream genePlch1, LOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032, EG56544, 4930518C23Rik, LOC380739, EG637004
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111H13.bB6Ng01-111H13.g
ACCDH917808DH917809
length1,2311,118
definitionDH917808|Mus musculus domesticus DNA, BAC clone: B6Ng01-111H13, 5' end.DH917809|Mus musculus domesticus DNA, BAC clone: B6Ng01-111H13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttatgttagataccattcttttatcagatgtaggattca
taaagatcttttcccaatctgtgggtggacatttggtcttattgacagtg
tcctttgccttatagaagtatttcaattttatgaggtcccattttttgat
tgttgatcttagaacataagccattgatgctgtgttcaggaaagtttccc
ttgtgtctgtgttcatagatttcccccactttctcttctattaaattcag
tgtatctagttttatgtggaggtccgtgatccacttggacttgagcttta
tataaggagataagaatggatcaatttacaataaatatttaagatgattt
ttttaaaaaggatggattaatttgtcttcttctacatgccaaccgctggt
tgagccagcaccatttgttgaaaatgctgtttttttttccccactggatg
gtttcagttcctttgtcaaagaccaaatgaccataggtgtttggggtcat
ttttgggtcttcaattctattttatttatctacctgcctgtctctgttcc
aatactgtgtgttctggatttcctggatgttttgggttaggaccttttta
tattttgcattttctttgactgttgtgccaatgtttactatggtatcttc
tgcagccaacagtctctcttctatctcttgtattctgtttgtgatgcttg
catctatgactcttgatctctttcctaggttttctaactccagggttgtc
tccctttgtgatttctttatttttttctagttccatttttagatcctgga
tggttttgtttattcccttcacctgtttggttgtgttttcctgtaatttt
taaaaggatttttgtgttcctctttaagggcttctagctgtttacctgtg
ttctctgtatttctttaagggagttatttatgtcttcttaaagtcctctg
tcatcatcagagatgtgattttaaatctgatcttgcgtttctggtgtgat
gggatatccaggactgctttatggagactgggttctgatgatgccagtag
ctgtttctgtgctatgattctgactgcctcccacatatgatatcttactg
ctacctggccttgagtttctgaccgagaccgccctcattgtacatgttgt
gccaactctccccgagatgacgtctcgtaccctggattctgactggatcc
tggatgtgctaaacctcagatgacgcgggcg
gaattcagctctttgtcaccttacttttccttctctggctatctagatgt
ctgtcttccactgaaggaagaacctttgcaaggcttttctgtgttgatct
ttgtgttgtttgtcctacaaccagagtgtgtgggccatggacttgtcaga
ggaagttatatccctaggtgcctttcattccctcggtcccagatgcagct
atcagcaaactttccactgtgtgtcttagaccttggcacctctaagtcct
tgctctcatttgtcactcttccaaggagccactctatggctcagaccaga
ttcccactgtgtagagcattgcacagctcagattcaaaagatttccctct
tgctagagcaaatggaattcttacagaactctcaaattgccaaagactta
taatcagaccagtgatcaagtcattacttacaaatatttcccacaagaac
tgttaagttctttggcttaattttctggtatagtgaatttaatcagatga
aatttagatgccttttctaccttcaatattctgaagtgaaatgagctcat
tattccaaaaacacatgtatagaggaattaaaaaattatcttaactgaaa
gccaagaatcaaaatagtaacaatatgtgtgactgaaaaatatattttca
ttatatttccttgactctaataatgtaatatacacatagctgtgaatttt
tgaaaacagtgtacatcatattctggagcaactctctgacagtatgttga
ggagaaatgacacaagctaaaccttgaaagccagattaataaacgtaccc
atttaagaatacctgttgtgaaactctgtatactacacaccaactaatgt
taagaacacaaagtcatagaaaacaggtggagagatgtggaaaactgaca
ttatgggcatactccatggggggcctaagggcaagcctcagcctcattct
tagcctggaactcattggtccaaggtcagtgactaagtgtctccatattc
agccggcctgtgctggtctgctttgactctgctccatcgtggtcctagtt
ctagtctgaggcttcaatcctggctcattccagtctgctagtgagttctg
ctgtcttttctgatccga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_63118267_63119398
seq2: B6Ng01-111H13.g_70_1187

seq1  GAATTCAGCTCTTTGTCACCTTACTTTTCCTTCTCTGGCTATCTAGATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTCTTTGTCACCTTACTTTTCCTTCTCTGGCTATCTAGATGT  50

seq1  CTGTCTTCCACTGAAGGAAGAACCTTTGCAAGGCTTTTCTGTGTTGATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTCCACTGAAGGAAGAACCTTTGCAAGGCTTTTCTGTGTTGATCT  100

seq1  TTGTGTTGTTTGTCCTACAACCAGAGTGTGTGGGCCATGGACTTGTCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTGTTTGTCCTACAACCAGAGTGTGTGGGCCATGGACTTGTCAGA  150

seq1  GGAAGTTATATCCCTAGGTGCCTTTCATTCCCTCGGTCCCAGATGCAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTATATCCCTAGGTGCCTTTCATTCCCTCGGTCCCAGATGCAGCT  200

seq1  ATCAGCAAACTTTCCACTGTGTGTCTTAGACCTTGGCACCTCTAAGTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCAAACTTTCCACTGTGTGTCTTAGACCTTGGCACCTCTAAGTCCT  250

seq1  TGCTCTCATTTGTCACTCTTCCAAGGAGCCACTCTATGGCTCAGACCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCATTTGTCACTCTTCCAAGGAGCCACTCTATGGCTCAGACCAGA  300

seq1  TTCCCACTGTGTAGAGCATTGCACAGCTCAGATTCAAAAGATTTCCCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACTGTGTAGAGCATTGCACAGCTCAGATTCAAAAGATTTCCCTCT  350

seq1  TGCTAGAGCAAATGGAATTCTTACAGAACTCTCAAATTGCCAAAGACTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGAGCAAATGGAATTCTTACAGAACTCTCAAATTGCCAAAGACTTA  400

seq1  TAATCAGACCAGTGATCAAGTCATTACTTACAAATATTTCCCACAAGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGACCAGTGATCAAGTCATTACTTACAAATATTTCCCACAAGAAC  450

seq1  TGTTAAGTTCTTTGGCTTAATTTTCTGGTATAGTGAATTTAATCAGATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGTTCTTTGGCTTAATTTTCTGGTATAGTGAATTTAATCAGATGA  500

seq1  AATTTAGATGCCTTTTCTACCTTCAATATTCTGAAGTGAAATGAGCTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGATGCCTTTTCTACCTTCAATATTCTGAAGTGAAATGAGCTCAT  550

seq1  TATTCCAAAAACACATGTATAGAGGAATTAAAAAATTATCTTAACTGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCAAAAACACATGTATAGAGGAATTAAAAAATTATCTTAACTGAAA  600

seq1  GCCAAGAATCAAAATAGTAACAATATGTGTGACTGAAAAATATATTTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGAATCAAAATAGTAACAATATGTGTGACTGAAAAATATATTTTCA  650

seq1  TTATATTTCCTTGACTCTAATAATGTAATATACACATAGCTGTGAATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTCCTTGACTCTAATAATGTAATATACACATAGCTGTGAATTTT  700

seq1  TGAAAACAGTGTACATCATATTCTGGAGCAACTCTCTGACAGTATGTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACAGTGTACATCATATTCTGGAGCAACTCTCTGACAGTATGTTGA  750

seq1  GGAGAAATGACACAAGCTAAACCTTGAAAGCCAGATTAATAAACGTACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAATGACACAAGCTAAACCTTGAAAGCCAGATTAATAAACGTACCC  800

seq1  ATTTTAAGAATACCTGTTGTGAAACTCTGTATACTACACACCAACTAAGG  850
      | |||||||||||||||||||||||||||||||||||||||||||||| |
seq2  A-TTTAAGAATACCTGTTGTGAAACTCTGTATACTACACACCAACTAATG  849

seq1  TTAAGAACACAAAGTCATAGAAAACAAGTGGAGAGATGTGGAAAACTGAC  900
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTAAGAACACAAAGTCATAGAAAACAGGTGGAGAGATGTGGAAAACTGAC  899

seq1  ATTATGGCCATACTCCATGTGGGGCCTAAGGGCAAG-CTCAGCCTCATTC  949
      ||||||| ||||||||||| |||||||||||||||| |||||||||||||
seq2  ATTATGGGCATACTCCATGGGGGGCCTAAGGGCAAGCCTCAGCCTCATTC  949

seq1  -TAGCCTGGAACTCATTGGGTCCAAGGTCAGTGACTAAGTGTCTCCATAT  998
       |||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTAGCCTGGAACTCATT-GGTCCAAGGTCAGTGACTAAGTGTCTCCATAT  998

seq1  CCAGCCGGCCTTGTGCCTGGTCTGCTTTTGACCTCTGCTCCCATCCGTGG  1048
       ||||||||| |||| ||||||||| ||||| ||||||| |||| ||| |
seq2  TCAGCCGGCC-TGTG-CTGGTCTGC-TTTGA-CTCTGCT-CCAT-CGT-G  1041

seq1  GTTCTAG-TCTAGTCCCTTGAGGTCTTCACTCCTGGCTCATTCCCCAGTT  1097
      || |||| |||||||   ||||| ||||| ||||||||||||  |||| |
seq2  GTCCTAGTTCTAGTC---TGAGG-CTTCAATCCTGGCTCATT--CCAG-T  1084

seq1  CTGGCTAGTGAGTTTCTGCTGTC-TTTCTGATCCGA  1132
      || ||||||||| |||||||||| ||||||||||||
seq2  CT-GCTAGTGAG-TTCTGCTGTCTTTTCTGATCCGA  1118