BAC Information

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BAC

Clone NameB6Ng01-112P23
Chromosome3 (Build37)
Map Location 125,527,999 - 125,529,063
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668820, Ndst4
Downstream geneUgt8a, Arsj, Camk2d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112P23.bB6Ng01-112P23.g
ACCDH918908DH918909
length1,0731,219
definitionDH918908|Mus musculus domesticus DNA, BAC clone: B6Ng01-112P23, 5' end.DH918909|Mus musculus domesticus DNA, BAC clone: B6Ng01-112P23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtccatgttatgcagaaaaaaatcaacccaagaagtaattc
aaatccaaatagtgtttattcttatctatctatctatctatctatctatc
tgtctgtctgtctgtctgtctgtctgtctatatctgatcttgaatttgat
ttaaaaaaaaagtttttcctgggttgcaacctagtttcaaggagttgttt
ggtttttgttttgttttgttttgctttgctttgtgttgttttgttttgtt
ttcttcaaggaagtgaggttgccatccttgtaattagaaaagaaccagtg
cccttaaaaagaagacattatttggtaatgagcactgcttcgaactgtct
aagactttgattccaataaaaacagcatctgcagaaatgagtattagcag
taaatactcaaggaaatgattctatatcacttgcaatatccttctagcat
gtatacaggcaaagaattggtatatataaatgaagtaaatttatacgttc
agtgatataactgacacactaataaaatgctagattaagtttaaagcagg
aaaagcttctagctatatcttatatgtgaggtagtattaggaaacatggg
ctatttaatttcataaaatctctagtttaaaggagctcagaataatttgc
aaaatataattttaaagcttgtcagctttaagaatatggtagggaaatat
tccactaagttgcccacattatcttgaagaataaattgaatcaaaagcag
cagacactctcactttccctacttgtcagcacagccaggtgtgaaatggg
gctctcccttgtgctaggttttttaagtagatccacccaattcagcaatc
atcatatcaacacacccaaaacattatcccttgccaatacactatgtgtt
ccttccttttgacatgaggtattatgaaacaggcagcatgttgatggctc
aataatcactgacattctgggtagtcttttggaatcaattagattaacct
ctgggcatgtgtagagaacaattaatggttagggggaagatcaaccttga
atattggtaccactgttcaatag
gaattctttgtttagctctggacactgtttttaatagggttatttgatta
tctgtagtctaacttcttgagttcttgtatatattgaatattagccctct
attacatgtaggattagtaatgatcttttccaatctattggttgctgttt
tgttctattgacagtgtcctttgccttacagaaactttgcagttttgtga
gctactcatttgtcaattattgatcttagagcataagcatattttctgtt
caggatatcttcccctgtgcccatgtgctggaggttcttccccactttct
cttctattactttcagtttatctggttttacgtggaggttcttgatccat
ttggacttgagcttttacaaggagataagaatggatctattcgcattctt
ctatatgctaactgccagttgaaccagcaccatttgttgaaaatgctgtt
ttccccaccaccaccactcccccactggatggttttagctcctttatcaa
agatcaagtgactataggtgtgtgagtttatttctgggtcttcagttcta
ttctattgatctatctgcctgtcactgtatcaataccatgcagtttgttt
gtttgtttgtttgttttaatcacgattgctctgtagtacagcttgaggtc
agacatggtgattccccataatgtcttttattgttgagaatagttttcac
tatcctagttttgttttgttgttgttgttatttcagatgaatttggaaat
tgctctaactctatgaagaattgatttggaattttgatggggatttcact
gaatctgtagattactttcagcaagatggccatttttactatattaatct
taccaatccatgcacatgggagatttttccatcttctgagatcttagatt
tctttcttcagagacttgaagtttgtttatttgagattgatcatatcatg
caattacccagaggcctttataaactacatggtatgtctcaaacatccat
aataaatgtcattaatactagggtatcctcactcaaatttctattaaaaa
atacaagttttctgtttggtaaaagctaattataaacagtaaaataggtt
cggttgaatataattgaattcctatttaaggactgattttaatttaactt
atgtgcctctggtaatatgctccatgcataagtgatgacactcacacatc
tggtgtcacctgcgatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_125527999_125529063
seq2: B6Ng01-112P23.b_46_1118

seq1  GAATTCTTTGTCCATGTTATGCAGAAAAAAATCAACCCAAGAAGTAATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTCCATGTTATGCAGAAAAAAATCAACCCAAGAAGTAATTC  50

seq1  AAATCCAAATAGTGTTTATTCTTATCTATCTATCTATCTATCTATCTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCAAATAGTGTTTATTCTTATCTATCTATCTATCTATCTATCTATC  100

seq1  TGTCTGTCTGTCTGTCTGTCTGTCTGTCTATATCTGATCTTGAATTTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCTGTCTGTCTGTCTGTCTGTCTATATCTGATCTTGAATTTGAT  150

seq1  TTAAAAAAAAAGTTTTTCCTGGGTTGCAACCTAGTTTCAAGGAGTTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAAAAGTTTTTCCTGGGTTGCAACCTAGTTTCAAGGAGTTGTTT  200

seq1  GGTTTTTGTTTTGTTTTGTTTTGCTTTGCTTTGTGTTGTTTTGTTTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTGTTTTGTTTTGTTTTGCTTTGCTTTGTGTTGTTTTGTTTTGTT  250

seq1  TTCTTCAAGGAAGTGAGGTTGCCATCCTTGTAATTAGAAAAGAACCAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAAGGAAGTGAGGTTGCCATCCTTGTAATTAGAAAAGAACCAGTG  300

seq1  CCCTTAAAAAGAAGACATTATTTGGTAATGAGCACTGCTTCGAACTGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAAAAAGAAGACATTATTTGGTAATGAGCACTGCTTCGAACTGTCT  350

seq1  AAGACTTTGATTCCAATAAAAACAGCATCTGCAGAAATGAGTATTAGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTTGATTCCAATAAAAACAGCATCTGCAGAAATGAGTATTAGCAG  400

seq1  TAAATACTCAAGGAAATGATTCTATATCACTTGCAATATCCTTCTAGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACTCAAGGAAATGATTCTATATCACTTGCAATATCCTTCTAGCAT  450

seq1  GTATACAGGCAAAGAATTGGTATATATAAATGAAGTAAATTTATACGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACAGGCAAAGAATTGGTATATATAAATGAAGTAAATTTATACGTTC  500

seq1  AGTGATATAACTGACACACTAATAAAATGCTAGATTAAGTTTAAAGCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATATAACTGACACACTAATAAAATGCTAGATTAAGTTTAAAGCAGG  550

seq1  AAAAGCTTCTAGCTATATCTTATATGTGAGGTAGTATTAGGAAACATGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTTCTAGCTATATCTTATATGTGAGGTAGTATTAGGAAACATGGG  600

seq1  CTATTTAATTTCATAAAATCTCTAGTTTAAAGGAGCTCAGAATAATTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTAATTTCATAAAATCTCTAGTTTAAAGGAGCTCAGAATAATTTGC  650

seq1  AAAATATAATTTTAAAGCTTGTCAGCTTTAAGAATATGGTAGGGAAATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATAATTTTAAAGCTTGTCAGCTTTAAGAATATGGTAGGGAAATAT  700

seq1  TCCACTAAGTTGCCCACATTATCTTGAAGAATAAATTGAATCAAAAGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTAAGTTGCCCACATTATCTTGAAGAATAAATTGAATCAAAAGCAG  750

seq1  CAGACACTCTCACTTTCCCTACTTGTCAGCACAGCCAGGTGTGAAATGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACTCTCACTTTCCCTACTTGTCAGCACAGCCAGGTGTGAAATGGG  800

seq1  GCTCTCCCTTGTGCTAGG-TTTTTAAGTAGATCCACCCAATTCAGCAATC  849
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GCTCTCCCTTGTGCTAGGTTTTTTAAGTAGATCCACCCAATTCAGCAATC  850

seq1  ATCATATCAACACACCCAAAACATTAT-CCTTGCCAATACACTATGTGTT  898
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATCATATCAACACACCCAAAACATTATCCCTTGCCAATACACTATGTGTT  900

seq1  CCTTCCTTTTGACATGAGGTATTATGAAACAGGCAGCATG-TGATGGCTC  947
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCTTCCTTTTGACATGAGGTATTATGAAACAGGCAGCATGTTGATGGCTC  950

seq1  -ATAATCACTGACATTCT-GGTAGTC-TTTGGAATCAATTAGATTAACCT  994
       ||||||||||||||||| ||||||| |||||||||||||||||||||||
seq2  AATAATCACTGACATTCTGGGTAGTCTTTTGGAATCAATTAGATTAACCT  1000

seq1  CTGGGCATGTGTAGAG-ACAATTAATGGTTAGGGGGAAGATCCACCCTTG  1043
      |||||||||||||||| ||||||||||||||||||||||||| ||| |  
seq2  CTGGGCATGTGTAGAGAACAATTAATGGTTAGGGGGAAGATCAACCTTGA  1050

seq1  ATA-TGGTACCACTGTTCCATAG  1065
      ||| |||||||||||||| ||||
seq2  ATATTGGTACCACTGTTCAATAG  1073