BAC Information

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BAC

Clone NameB6Ng01-118A16
Chromosome3 (Build37)
Map Location 151,115,847 - 151,117,022
singlet/doubletsinglet
Overlap geneEltd1
Upstream geneLOC100040455, LOC100040463, LOC623554
Downstream geneIfi44, H28, Ptgfr, LOC100040741, LOC100040597, LOC676548, Gipc2, Dnajb4, Fubp1, Nexn, C030011O14Rik, Usp33, Zzz3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118A16.b
ACCDH922626
length1,206
definitionDH922626|Mus musculus domesticus DNA, BAC clone: B6Ng01-118A16, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttgtaaactctcagtaccctgccctctgattgagaccttttct
cccaggagggataaagggttaccactctatctcagcccgctcaggtgtct
tcattgtgagcctgactacatgtaagcccaggtccgtgaggaaaaattct
ccatggggttgtcagtgactccacacttgccctccatgctttgcctgccc
ccaagtacacacaatacacacacacacacacacacacacacacccgctca
cacactaataataaatggaagaagggaaggaaactgatggaaagatggag
agaaagaggagaaagggaaagaaaaaagggagggagttcctgtgactggg
ccataatccaatgtgctctctcccgctgtgaaaaatctttaaaggctagg
tcttaccacatttcactgaaatgattccactggagctattgattcctagc
tacggattctggtgccttgagatacgttcctctgctaatgaagctgccct
ttcatctaattgaaaactggggtttgaactgtgatttttgttgaatacga
aatatcaagggcagacaatatctatggaaaaggaacctcgctactattta
gccatggtaggttgtccagctatgtagctccattgcagaaagaaagtatg
tacgattgccctccaaattgattgacgccttatggaactgcccctctagt
ctaagagagatcaattactgtgtggtgcagagtctctgcaaaagctgact
gtaagattctatcgtcatcctagagattttcagagactgaatctactgca
tatatacggttttgtcaataccaaagccatttttgaagattaaagaagat
aatacaaattaagcacttaattaaaatggtcctacagaaagatctcaata
aatcaagactgtcactcacatacatttgccagtcacttattgtcaaaagt
tgttttaagcacattctcggtcttcaaccactgaggaaagtcgatgaagg
ttactgggccacacgccttcgacataatgttatcaaacgcagggaagcat
ttcctgctgcttcaagcacaaccgcatgtcacatctggacatggacaata
aaacatcttgccattctcagcctaccatttactcttctctatgttgcgcg
aaaggccaagtaggaaacatttgaaggctgttcagaatacattagctaca
tttctc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_151115847_151117022
seq2: B6Ng01-118A16.b_78_1246

seq1  TGAGACCTTTTCTCAAAAGGAGGGATAAAGGGTTACCACAATAGCTCAGC  50
      ||||||||||||||   ||||||||||||||||||||||  || ||||||
seq2  TGAGACCTTTTCTC-CCAGGAGGGATAAAGGGTTACCACTCTATCTCAGC  49

seq1  CAGTAGAGGTGTTTACATTATAAGCCTGACTACATGTAGGCCCAGGTCAG  100
      | |   |||||| | |||| | |||||||||||||||| ||||||||| |
seq2  CCGCTCAGGTGTCTTCATTGTGAGCCTGACTACATGTAAGCCCAGGTCCG  99

seq1  TGAGGAAAAATTCTCCATGGGGTTGTCAGTGACTCCACACTTGTCCACCA  150
      ||||||||||||||||||||||||||||||||||||||||||| || |||
seq2  TGAGGAAAAATTCTCCATGGGGTTGTCAGTGACTCCACACTTGCCCTCCA  149

seq1  TGCTTTGCATGCCCCCAAGTACACACAATACACACACACACACACACACA  200
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGCCTGCCCCCAAGTACACACAATACACACACACACACACACACA  199

seq1  CACACACACACACACACACTAATAATAAATAGAAAGAAGGGAAGGAAACT  250
      ||||||| | | |||||||||||||||||| | |||||||||||||||||
seq2  CACACACCCGCTCACACACTAATAATAAAT-GGAAGAAGGGAAGGAAACT  248

seq1  GATGGAAAGATGGAGAGAAGGAGGAGAAAGGGAAAGAAGAAAGGGAGGGA  300
      ||||||||||||||||||| |||||||||||||||||| |||||||||||
seq2  GATGGAAAGATGGAGAGAAAGAGGAGAAAGGGAAAGAAAAAAGGGAGGGA  298

seq1  GTTCCTGTGAGTGGTCCATAGTACAAGCTGCGCTATCATGCTGTGAAAAA  350
      |||||||||| ||| ||||| | |||  ||| || ||  |||||||||||
seq2  GTTCCTGTGACTGGGCCATAATCCAATGTGCTCTCTCCCGCTGTGAAAAA  348

seq1  TCTAGTAAAGGCTAAGTCTTACCACATTTCACTGAAATGATTCCACTGGA  400
      |||  ||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCT-TTAAAGGCTAGGTCTTACCACATTTCACTGAAATGATTCCACTGGA  397

seq1  GCTATTGATTCCTAGCTACGGCTTCTGGTGCCTTGAGATACGTTCCTCTG  450
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GCTATTGATTCCTAGCTACGGATTCTGGTGCCTTGAGATACGTTCCTCTG  447

seq1  CTAATGAAGCTGCCCTTTCATCAGTAGTT-AAAACTGGGGTTTGAACTGT  499
      ||||||||||||||||||||||  || || ||||||||||||||||||||
seq2  CTAATGAAGCTGCCCTTTCATC--TAATTGAAAACTGGGGTTTGAACTGT  495

seq1  GATTTTTGTTCAGATACAGAATATCAAGGGCAGACAATAACTATGGAGAA  549
      |||||||||| | ||||  |||||||||||||||||||| ||||||| ||
seq2  GATTTTTGTTGA-ATACGAAATATCAAGGGCAGACAATATCTATGGAAAA  544

seq1  GGAACAGTGCTACTATTTAGCCAGGGTAGGTT-TCAGGCGATGTAGCTCC  598
      |||||   ||||||||||||||| |||||||| ||  || ||||||||||
seq2  GGAACCTCGCTACTATTTAGCCATGGTAGGTTGTCCAGCTATGTAGCTCC  594

seq1  ATTGCAGAAAGTATGTATGTACGATTGCAGTCCAAATTGATTGAAGCCTT  648
      ||||||||||| | ||||||||||||||  |||||||||||||| |||||
seq2  ATTGCAGAAAGAAAGTATGTACGATTGCCCTCCAAATTGATTGACGCCTT  644

seq1  ATGGAACTGCCCCTCTAATCTGTAGAGAGATGAATTACAATGGAAGGCAG  698
      ||||||||||||||||| |||  |||||||| ||||||  ||    ||||
seq2  ATGGAACTGCCCCTCTAGTCT-AAGAGAGATCAATTACTGTGTGGTGCAG  693

seq1  AGTCTCTGCAGAAGCTGTCTGTGGGATTCAATCTTCATCCTAGAGTTTTT  748
      |||||||||| |||||| ||||  ||||| ||| ||||||||||| ||||
seq2  AGTCTCTGCAAAAGCTGACTGTAAGATTCTATCGTCATCCTAGAGATTTT  743

seq1  CAGTGACTAAATCTACTGCATATATACGGTTTTGTCAATACCAAAGCCAT  798
      ||| |||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACTGAATCTACTGCATATATACGGTTTTGTCAATACCAAAGCCAT  793

seq1  TTTTGAAGATTAAAGAAGATAATACAAATTAAGCACTTAATTAAAATGGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAGATTAAAGAAGATAATACAAATTAAGCACTTAATTAAAATGGT  843

seq1  CCTACAGAAAGATCTCAATAAATCAAGACTGTCACTCACATACATTTGCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAGAAAGATCTCAATAAATCAAGACTGTCACTCACATACATTTGCC  893

seq1  AGTCACTTATTGTCAAAAAGTTGTTTTAAGCACATTCTCGGTCTTCAACC  948
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGTCACTTATTGTC-AAAAGTTGTTTTAAGCACATTCTCGGTCTTCAACC  942

seq1  ACTGAGGAAAGTCGATGAAGGTTACTGGGCCACACG-CTTCGAACATTAA  997
      |||||||||||||||||||||||||||||||||||| ||||| ||| |||
seq2  ACTGAGGAAAGTCGATGAAGGTTACTGGGCCACACGCCTTCG-ACA-TAA  990

seq1  TGTTATCAAACGCAAGGAAGCATTTTCCTGCTGCCTCCAAAGCACAACCC  1047
      |||||||||||||| ||||||| ||||||||||| ||  |||||||| ||
seq2  TGTTATCAAACGCAGGGAAGCA-TTTCCTGCTGCTTC--AAGCACAA-CC  1036

seq1  GCATGTTCACATCTGGACATGGACAAT-AAACATCTGCCAATTCTCAAGC  1096
      ||||| ||||||||||||||||||||| ||||||||  | |||||||  |
seq2  GCATG-TCACATCTGGACATGGACAATAAAACATCTTGCCATTCTCAGCC  1085

seq1  TACCATTTACACTTTTC-ATGT----CCAAAGACAAAATAAGAAAAACAT  1141
      |||||||||| ||| || ||||    | |||| | || || |||| |   
seq2  TACCATTTACTCTTCTCTATGTTGCGCGAAAGGCCAAGTAGGAAACA---  1132

seq1  TTTTAAAAGCTGTTCA-AAT--ATTAGCTACATTTCTC  1176
       ||| || |||||||| |||  ||||||||||||||||
seq2  -TTTGAAGGCTGTTCAGAATACATTAGCTACATTTCTC  1169