BAC Information

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BAC

Clone NameB6Ng01-118F12
Chromosome3 (Build37)
Map Location 99,808,076 - 99,969,250
singlet/doubletdoublet
Overlap geneSpag17, LOC623045, Wdr3, Gdap2
Upstream geneLOC668557, Wars2, Tbx15, M6pr-ps
Downstream geneLOC195514, 4930431B09Rik, OTTMUSG00000007026, Man1a2, Vtcn1, Trim45, Ttf2, Igsf2, Ptgfrn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118F12.bB6Ng01-118F12.g
ACCDH922850DH922851
length1,12468
definitionDH922850|Mus musculus domesticus DNA, BAC clone: B6Ng01-118F12, 5' end.DH922851|Mus musculus domesticus DNA, BAC clone: B6Ng01-118F12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,808,076 - 99,809,205)(99,969,183 - 99,969,250)
sequence
gaattctactatcagttgacagtcagcaggggcaactattcagaaaaaat
gtccctgctgtaacatgaccaaaagctaactagagcataaattactctta
ggcctgtgagaagtgtatctaggtcagttttttaatatacaaacttggta
aagcaaatacaaacttggtgaaggcatgatctgaggaaattcttgttcta
tgtaatatcaggacaatggtagcttagcattctttgctcccaaaagacct
tatcacaatctttctgggcctaaactgtgagatggactctgatgaactta
tatagtaacccattttgattttacagttgtgtcttcccacttcaaaaagt
tctcaaagttacgtttctgtatttgcactttgctaatactttacagacat
cttatcatacatatgactcactacatcaagacaaagtggggagaaataca
atactttgattttatattaaaacattttgctattattagatatagaagct
gaaaaattgaagagaaaaaattccatcaaggaacttgaggttttctggaa
gtacttggaaccaatcctgaataatgagaaacttgaaatacatctctttg
atgttgctcgtctccagtacatggtcaaggcaacatattttccttctgat
tggtcagacaatgaacagatggtgagtctattggtcagcatgagtgagtg
gtccattcacagtcactcattccacagctgttcagtaaccactggtaaca
atgacttttgttgggctctctcctctttcagacaatgatggtgacaaagg
ccactcttgtatcatagcctgattctgtagcttttagtctatagattaat
gataataaaatatagcagatgctgattctttcattaaattacaattggct
ctggttcatgtattggtaatgatctaagtaataattaaaatgtatgatgg
tggcaaattttacgttttattgtattacatgttaatcccttccaaagtac
acatttcagcatcagagagctgactgacagcaaagcctgtggggagactt
caacctctgaggttcttctgaaaggatttgaacaagctgatgagagagta
tactttataagagattacttattg
tagggatagactgaaaacaagcagggtggtgggcatgatgggaactgtgt
gtgtgggggggaagggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_99808076_99809205
seq2: B6Ng01-118F12.b_48_1171

seq1  GAATTCTACTATCAGTTGACAGTCAGCAGGGGCAACTATTCAGAAAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTATCAGTTGACAGTCAGCAGGGGCAACTATTCAGAAAAAAT  50

seq1  GTCCCTGCTGTAACATGACCAAAAGCTAACTAGAGCATAAATTACTCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTGCTGTAACATGACCAAAAGCTAACTAGAGCATAAATTACTCTTA  100

seq1  GGCCTGTGAGAAGTGTATCTAGGTCAGTTTTTTAATATACAAACTTGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGTGAGAAGTGTATCTAGGTCAGTTTTTTAATATACAAACTTGGTA  150

seq1  AAGCAAATACAAACTTGGTGAAGGCATGATCTGAGGAAATTCTTGTTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAATACAAACTTGGTGAAGGCATGATCTGAGGAAATTCTTGTTCTA  200

seq1  TGTAATATCAGGACAATGGTAGCTTAGCATTCTTTGCTCCCAAAAGACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATATCAGGACAATGGTAGCTTAGCATTCTTTGCTCCCAAAAGACCT  250

seq1  TATCACAATCTTTCTGGGCCTAAACTGTGAGATGGACTCTGATGAACTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACAATCTTTCTGGGCCTAAACTGTGAGATGGACTCTGATGAACTTA  300

seq1  TATAGTAACCCATTTTGATTTTACAGTTGTGTCTTCCCACTTCAAAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTAACCCATTTTGATTTTACAGTTGTGTCTTCCCACTTCAAAAAGT  350

seq1  TCTCAAAGTTACGTTTCTGTATTTGCACTTTGCTAATACTTTACAGACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAGTTACGTTTCTGTATTTGCACTTTGCTAATACTTTACAGACAT  400

seq1  CTTATCATACATATGACTCACTACATCAAGACAAAGTGGGGAGAAATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCATACATATGACTCACTACATCAAGACAAAGTGGGGAGAAATACA  450

seq1  ATACTTTGATTTTATATTAAAACATTTTGCTATTATTAGATATAGAAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTGATTTTATATTAAAACATTTTGCTATTATTAGATATAGAAGCT  500

seq1  GAAAAATTGAAGAGAAAAAATTCCATCAAGGAACTTGAGGTTTTCTGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTGAAGAGAAAAAATTCCATCAAGGAACTTGAGGTTTTCTGGAA  550

seq1  GTACTTGGAACCAATCCTGAATAATGAGAAACTTGAAATACATCTCTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTGGAACCAATCCTGAATAATGAGAAACTTGAAATACATCTCTTTG  600

seq1  ATGTTGCTCGTCTCCAGTACATGGTCAAGGCAACATATTTTCCTTCTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGCTCGTCTCCAGTACATGGTCAAGGCAACATATTTTCCTTCTGAT  650

seq1  TGGTCAGACAATGAACAGATGGTGAGTCTATTGGTCAGCATGAGTGAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAGACAATGAACAGATGGTGAGTCTATTGGTCAGCATGAGTGAGTG  700

seq1  GTCCATTCACAGTCACTCATTCCACAGCTGTTCAGTAACCACTGGTAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTCACAGTCACTCATTCCACAGCTGTTCAGTAACCACTGGTAACA  750

seq1  ATGACTTTTGTTGGGCTCTCTCCTCTTTCAGACAATGATGGTGACAAAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTTTGTTGGGCTCTCTCCTCTTTCAGACAATGATGGTGACAAAGG  800

seq1  CCACTCTTGTATCATAGCCTGATTCTGTAGCTTTTAGTCTATAGATTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCTTGTATCATAGCCTGATTCTGTAGCTTTTAGTCTATAGATTAAT  850

seq1  GATAATAAAATATAGCAGATGCTGATTCTTTCATTAAATTACAATTGGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATAAAATATAGCAGATGCTGATTCTTTCATTAAATTACAATTGGCT  900

seq1  CTGGTTCATGTATTGGTAATGATCTAAGTAATAATTAAAATGTATGATGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTCATGTATTGGTAATGATCTAAGTAATAATTAAAATGTATGATGG  950

seq1  TGGCAAATTTTACGTTTTATTGTATTACATGTTAATCCCTTCCAAAGTAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAATTTTACGTTTTATTGTATTACATGTTAATCCCTTCCAAAGTAC  1000

seq1  ACATTTCAGCATCAAGAGAGCTGAACTGACAGCAAAGCCTGTGGGGAGAC  1050
      ||||||||||||| ||||||||| ||||||||||||||||||||||||||
seq2  ACATTTCAGCATC-AGAGAGCTG-ACTGACAGCAAAGCCTGTGGGGAGAC  1048

seq1  TCCAACCTCTGAGGGTTCTTCTGAAAGGATTTGAACAAAGCTGGATGGAG  1100
      | |||||||||| ||||||||||||||||||||||| ||||| ||| |||
seq2  TTCAACCTCTGA-GGTTCTTCTGAAAGGATTTGAAC-AAGCT-GAT-GAG  1094

seq1  AGAGTATACTTATAAAGAGATTACTTATTG  1130
      |||||||||||   ||||||||||||||||
seq2  AGAGTATACTTTATAAGAGATTACTTATTG  1124

seq1: chr3_99969183_99969250
seq2: B6Ng01-118F12.g_74_141 (reverse)

seq1  TCCCCTTCCCCCCCACACACACAGTTCCCATCATGCCCACCACCCTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTCCCCCCCACACACACAGTTCCCATCATGCCCACCACCCTGCTT  50

seq1  GTTTTCAGTCTATCCCTA  68
      ||||||||||||||||||
seq2  GTTTTCAGTCTATCCCTA  68