BAC Information

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BAC

Clone NameB6Ng01-119D16
Chromosome3 (Build37)
Map Location 126,919,684 - 126,920,288
singlet/doubletsinglet
Overlap genenone
Upstream geneArsj, Camk2d, Ank2, LOC100043749
Downstream geneLOC100043361, LOC100043364, Larp7, 4930422G04Rik, Neurog2, Alpk1, T2bp, BC002199, 5730508B09Rik, LOC100043382
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119D16.bB6Ng01-119D16.g
ACCDH923499DH923500
length1,155605
definitionDH923499|Mus musculus domesticus DNA, BAC clone: B6Ng01-119D16, 5' end.DH923500|Mus musculus domesticus DNA, BAC clone: B6Ng01-119D16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgcccgggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaagagctaaagggatctgcaacccta
tagtgaacacattatgagctacagtacccgagctcttgactctagctgca
tatatgtcaaagatgctagtcggcatcactgaagagagcccatgacttgc
aacttatattgcccagtaaggatcagcaaaagggatggtggcaggggaat
ggggt
gaattccattagttcaggaaacgtcctctgggctcctcctaaagtattca
tcactcatttcacttacggtatttctcctttaatacatttatccttgtgc
aattagtagtaaatcccagccaataaatcttcagatgagccaggctttat
ggatgcttttattcacccttcaagtagccaactgctgaccaaaaggggcg
tggtaatctaggaggcaatcatcagaaacactcatataagactttgattt
tcatttgcacatgctatcataatgtattatttaaacatctctggtaacaa
tgcaactttgtggcagaaaattgagttcttcctgagactcttgttggatt
tttcttatctttgagtgagaaatggatgacgcttctctcttctccagttc
cggatctagcctctggctctcacattcttctttgtctgactttgatggaa
ggcagagggactcctatccaaccatcggacctctggccacttttcccttt
ttgctcttcacctctcaagaggaagactcacctcctccccctcttgagaa
aacactcaagatgagagagggagagagaggagacagagagaggggggggg
gttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_126919684_126920288
seq2: B6Ng01-119D16.g_65_669 (reverse)

seq1  ATAACCCCCCCCCCTCTCTCTGTCTCCTCTCTCTCCCTCTCTCATCTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCCCCCCCCCTCTCTCTGTCTCCTCTCTCTCCCTCTCTCATCTTGA  50

seq1  GTGTTTTCTCAAGAGGGGGAGGAGGTGAGTCTTCCTCTTGAGAGGTGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTCTCAAGAGGGGGAGGAGGTGAGTCTTCCTCTTGAGAGGTGAAG  100

seq1  AGCAAAAAGGGAAAAGTGGCCAGAGGTCCGATGGTTGGATAGGAGTCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAAGGGAAAAGTGGCCAGAGGTCCGATGGTTGGATAGGAGTCCCT  150

seq1  CTGCCTTCCATCAAAGTCAGACAAAGAAGAATGTGAGAGCCAGAGGCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTCCATCAAAGTCAGACAAAGAAGAATGTGAGAGCCAGAGGCTAG  200

seq1  ATCCGGAACTGGAGAAGAGAGAAGCGTCATCCATTTCTCACTCAAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGGAACTGGAGAAGAGAGAAGCGTCATCCATTTCTCACTCAAAGATA  250

seq1  AGAAAAATCCAACAAGAGTCTCAGGAAGAACTCAATTTTCTGCCACAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATCCAACAAGAGTCTCAGGAAGAACTCAATTTTCTGCCACAAAG  300

seq1  TTGCATTGTTACCAGAGATGTTTAAATAATACATTATGATAGCATGTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTGTTACCAGAGATGTTTAAATAATACATTATGATAGCATGTGCA  350

seq1  AATGAAAATCAAAGTCTTATATGAGTGTTTCTGATGATTGCCTCCTAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAATCAAAGTCTTATATGAGTGTTTCTGATGATTGCCTCCTAGAT  400

seq1  TACCACGCCCCTTTTGGTCAGCAGTTGGCTACTTGAAGGGTGAATAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACGCCCCTTTTGGTCAGCAGTTGGCTACTTGAAGGGTGAATAAAAG  450

seq1  CATCCATAAAGCCTGGCTCATCTGAAGATTTATTGGCTGGGATTTACTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATAAAGCCTGGCTCATCTGAAGATTTATTGGCTGGGATTTACTAC  500

seq1  TAATTGCACAAGGATAAATGTATTAAAGGAGAAATACCGTAAGTGAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGCACAAGGATAAATGTATTAAAGGAGAAATACCGTAAGTGAAATG  550

seq1  AGTGATGAATACTTTAGGAGGAGCCCAGAGGACGTTTCCTGAACTAATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGAATACTTTAGGAGGAGCCCAGAGGACGTTTCCTGAACTAATGG  600

seq1  AATTC  605
      |||||
seq2  AATTC  605