BAC Information

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BAC

Clone NameB6Ng01-124D03
Chromosome3 (Build37)
Map Location 59,988,188 - 60,167,185
singlet/doubletdoublet
Overlap geneLOC669823
Upstream geneP2ry13, P2ry12, Igsf10, EG666751, EG666756, EG229330, EG435732, LOC433597, LOC433598, LOC100040407, LOC669780, EG666803, C130079G13Rik, LOC676914, Aadacl2, Aadac, Sucnr1
Downstream geneLOC100040485, Mbnl1, LOC676933, LOC100040501, EG666853, P2ry1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124D03.bB6Ng01-124D03.g
ACCDH927165DH927166
length1,1211,140
definitionDH927165|Mus musculus domesticus DNA, BAC clone: B6Ng01-124D03, 5' end.DH927166|Mus musculus domesticus DNA, BAC clone: B6Ng01-124D03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,166,059 - 60,167,185)(59,988,188 - 59,989,347)
sequence
gaattcaataaaaacctattttgagatgaaatgactctcctagttctcca
tggtattgtttaaaacagtgtaaggagcttataaagtggagaacttcaca
gaaatctccaagtgctgcagaagtggctgagtaactcaagaataggcatc
tcaaaaatgaatatgctcaaggattgctcttcctcctcatttctgtaatt
gtgtgacataattgtaggagaaaacacaggcctgacctggcagagagtct
acctggcatcctgtgcttccaaataagaagcacaaaatatcacgctcctg
attgctttcagaacactgaattctgaagtagtatgagtcaccagtgtctg
gcctgcagaccactctgcactcatcacatctccttgtatgtgcatcttct
acatagagaccctggtcatatgagtgctcattgtcagatccaagggaatg
tgctaaccaatcatagttgataggcttccactatataatgtataatagtt
gttcacgtgtaatagagcagacattgtttcctgaaaccatctccagggtg
gttcatctcagtgccctttactgagcaagaggcatcccagtcttggacat
aattcctgcctagaaattgtgaagcagactgttgacttctcagcctttta
tatttgcctttcctttaattatttccataaattctggatgcctatttata
cagaaaaatgtcaaaatacatagtaaaaattgtaaatttatcagagatgt
gcataaatgcatacccaagtggaaatcatattacctttttataaaaaggc
acaaagcacagaaagtattgaagataaaagaatagacaatgaaaattatt
aatgattaaatgatgtgatatacataacaaacaatgtcaacatgcaatgc
atgtagtacggtccctacccacttctggtctatttagtgctaaccactta
ctgtttactaagaacattattataaatttattgtactatattaagtttat
aaaatcactaatataacatatttctactctatttgggcttatttagtttt
tctttgtggaaaagctttttcaaagaaattctaacagaaatcatatgagg
tttccgtggttctggaattca
gaattcatttcaatgttctacaagcaactgaaatgtagccgggcagtggt
tgatacacgcctttaatcccagcaatttggaagcagacgattactgagtt
cgaggccagtctggtctacagagcgagttccaggacagccagggaaacac
agagaaaccctgtctcaaaaaacaaaaacaaaacaagacaaaaaacaaac
cataaataaataaataaataaataaataaataaagttatctttcttccac
tcccaattgctcaagcgttatcaatatggatgggcatttagtaattttgc
tattttaaaaaacattttgttttgataaatggcaaaaagaaagaacagag
gggctgaagagagagttccattagtaaaatatttggcttgcaagcatgag
gacctggactggagcccaaggtccattgtaaaaatgctggagctcttaga
aggcaaaataggttcacttcttttattcaatgtagctacacaactacagt
agggttggttctagtagtgcattagcctgttgctcaacctcagacctgtg
catttgttttatttatttatttgttataaacaaataatttgtaataaaca
aattgtcattgcacgactaaacatagaaactcatgtatgtcagacaggca
atctctcattaggctacatcaccagctctgcccatttgctttcaatttat
agacagcaagtcaggttgacagcaagtttggatgaagtggatgtgatcca
tctcactaattttcccacagtgaacctgtcagtcatggtacagcagtcag
taagcaatacaaaacaaagtgaaattggggtatctgtccagtggttgtac
tacagagattaacactgatgatgaaaggtcttcttttcctccatgttatg
aaacataggctatttcatggtagtatcaggctacacaacaaaatagcagg
aaacagatagcattttcagtgctgttgttaagaaatcattgcatagggca
tttgcaagagaggcgaagcccacaggcaaaaatgagtgattacaactctc
tattccctgcaagatgcctctatcttgatggcctgattctcctgaactta
taaatgaaataacctttccctctcgggatctcttgacaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_60166059_60167185
seq2: B6Ng01-124D03.b_43_1163 (reverse)

seq1  TGAATTCAGAAACCACAGAAA-CTCATAATGATTACTGTTAGAATTTCTC  49
      |||||||   |||||| |||| ||||| |||||| |||||||||||||| 
seq2  TGAATTCCAGAACCACGGAAACCTCAT-ATGATTTCTGTTAGAATTTCTT  49

seq1  TGAAAAAGCTTTTCCACAAAGAAAAACTAAATAAGCCAAAATAGAGTAGA  99
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGAAAAAGCTTTTCCACAAAGAAAAACTAAATAAGCCCAAATAGAGTAGA  99

seq1  AATATGTTTATATGTAGTGATTTTATAAACTTTATTATAGTACAATAAAT  149
      |||||| |||||| |||||||||||||||| ||| |||||||||||||||
seq2  AATATG-TTATAT-TAGTGATTTTATAAAC-TTAATATAGTACAATAAAT  146

seq1  TTTATTAATAATGTTCTTAGTTAAACAGTAAGTGGTTAGCACTATATAGA  199
      ||   ||||||||||||||| ||||||||||||||||||||||| |||||
seq2  TT--ATAATAATGTTCTTAG-TAAACAGTAAGTGGTTAGCACTAAATAGA  193

seq1  CCAGAAGTGGGTAGGGACCGTACTACATGCATTGCATGTTGACATTGTTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGTGGGTAGGGACCGTACTACATGCATTGCATGTTGACATTGTTT  243

seq1  GTTATGTATATCACATCATTTAATCATTAATAATTTTCATTGTCTATTCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGTATATCACATCATTTAATCATTAATAATTTTCATTGTCTATTCT  293

seq1  TTTATCTTCAATACTTTCTGTGCTTTGTGCCTTTTTATAAAAAGGTAATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTTCAATACTTTCTGTGCTTTGTGCCTTTTTATAAAAAGGTAATA  343

seq1  TGATTTCCACTTGGGTATGCATTTATGCACATCTCTGATAAATTTACAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCCACTTGGGTATGCATTTATGCACATCTCTGATAAATTTACAAT  393

seq1  TTTTACTATGTATTTTGACATTTTTCTGTATAAATAGGCATCCAGAATTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTATGTATTTTGACATTTTTCTGTATAAATAGGCATCCAGAATTT  443

seq1  ATGGAAATAATTAAAGGAAAGGCAAATATAAAAGGCTGAGAAGTCAACAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAATAATTAAAGGAAAGGCAAATATAAAAGGCTGAGAAGTCAACAG  493

seq1  TCTGCTTCACAATTTCTAGGCAGGAATTATGTCCAAGACTGGGATGCCTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCACAATTTCTAGGCAGGAATTATGTCCAAGACTGGGATGCCTC  543

seq1  TTGCTCAGTAAAGGGCACTGAGATGAACCACCCTGGAGATGGTTTCAGGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCAGTAAAGGGCACTGAGATGAACCACCCTGGAGATGGTTTCAGGA  593

seq1  AACAATGTCTGCTCTATTACACGTGAACAACTATTATACATTATATAGTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGTCTGCTCTATTACACGTGAACAACTATTATACATTATATAGTG  643

seq1  GAAGCCTATCAACTATGATTGGTTAGCACATTCCCTTGGATCTGACAATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCTATCAACTATGATTGGTTAGCACATTCCCTTGGATCTGACAATG  693

seq1  AGCACTCATATGACCAGGGTCTCTATGTAGAAGATGCACATACAAGGAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCATATGACCAGGGTCTCTATGTAGAAGATGCACATACAAGGAGA  743

seq1  TGTGATGAGTGCAGAGTGGTCTGCAGGCCAGACACTGGTGACTCATACTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGAGTGCAGAGTGGTCTGCAGGCCAGACACTGGTGACTCATACTA  793

seq1  CTTCAGAATTCAGTGTTCTGAAAGCAATCAGGAGCGTGATATTTTGTGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAATTCAGTGTTCTGAAAGCAATCAGGAGCGTGATATTTTGTGCT  843

seq1  TCTTATTTGGAAGCACAGGATGCCAGGTAGACTCTCTGCCAGGTCAGGCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTTGGAAGCACAGGATGCCAGGTAGACTCTCTGCCAGGTCAGGCC  893

seq1  TGTGTTTTCTCCTACAATTATGTCACACAATTACAGAAATGAGGAGGAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTCTCCTACAATTATGTCACACAATTACAGAAATGAGGAGGAAG  943

seq1  AGCAATCCTTGAGCATATTCATTTTTGAGATGCCTATTCTTGAGTTACTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATCCTTGAGCATATTCATTTTTGAGATGCCTATTCTTGAGTTACTC  993

seq1  AGCCACTTCTGCAGCACTTGGAGATTTCTGTGAAGTTCTCCACTTTATAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACTTCTGCAGCACTTGGAGATTTCTGTGAAGTTCTCCACTTTATAA  1043

seq1  GCTCCTTACACTGTTTTAAACAATACCATGGAGAACTAGGAGAGTCATTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTACACTGTTTTAAACAATACCATGGAGAACTAGGAGAGTCATTT  1093

seq1  CATCTCAAAATAGGTTTTTATTGAATTC  1127
      ||||||||||||||||||||||||||||
seq2  CATCTCAAAATAGGTTTTTATTGAATTC  1121

seq1: chr3_59988188_59989347
seq2: B6Ng01-124D03.g_66_1205

seq1  GAATTCATTTCAATGTTCTACAAGCAACTGAAATGTAGCCGGGCAGTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCAATGTTCTACAAGCAACTGAAATGTAGCCGGGCAGTGGT  50

seq1  TGATACACGCCTTTAATCCCAGCAATTTGGAAGCAGACGATTACTGAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACACGCCTTTAATCCCAGCAATTTGGAAGCAGACGATTACTGAGTT  100

seq1  CGAGGCCAGTCTGGTCTACAGAGCGAGTTCCAGGACAGCCAGGGAAACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGCCAGTCTGGTCTACAGAGCGAGTTCCAGGACAGCCAGGGAAACAC  150

seq1  AGAGAAACCCTGTCTCAAAAAACAAAAACAAAACAAGACAAAAAACAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAACCCTGTCTCAAAAAACAAAAACAAAACAAGACAAAAAACAAAC  200

seq1  CATAAATAAATAAATAAATAAATAAATAAATAAAGTTATCTTTCTTCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATAAATAAATAAATAAATAAATAAATAAAGTTATCTTTCTTCCAC  250

seq1  TCCCAATTGCTCAAGCGTTATCAATATGGATGGGCATTTAGTAATTTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATTGCTCAAGCGTTATCAATATGGATGGGCATTTAGTAATTTTGC  300

seq1  TATTTTAAAAAACATTTTGTTTTGATAAATGGCAAAAAGAAAGAACAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAAAAAACATTTTGTTTTGATAAATGGCAAAAAGAAAGAACAGAG  350

seq1  GGGCTGAAGAGAGAGTTCCATTAGTAAAATATTTGGCTTGCAAGCATGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGAAGAGAGAGTTCCATTAGTAAAATATTTGGCTTGCAAGCATGAG  400

seq1  GACCTGGACTGGAGCCCAAGGTCCATTGTAAAAATGCTGGAGCTCTTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGGACTGGAGCCCAAGGTCCATTGTAAAAATGCTGGAGCTCTTAGA  450

seq1  AGGCAAAATAGGTTCACTTCTTTTATTCAATGTAGCTACACAACTACAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAATAGGTTCACTTCTTTTATTCAATGTAGCTACACAACTACAGT  500

seq1  AGGGTTGGTTCTAGTAGTGCATTAGCCTGTTGCTCAACCTCAGACCTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTGGTTCTAGTAGTGCATTAGCCTGTTGCTCAACCTCAGACCTGTG  550

seq1  CATTTGTTTTATTTATTTATTTGTTATAAACAAATAATTTGTAATAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTTTTATTTATTTATTTGTTATAAACAAATAATTTGTAATAAACA  600

seq1  AATTGTCATTGCACGACTAAACATAGAAACTCATGTATGTCAGACAGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCATTGCACGACTAAACATAGAAACTCATGTATGTCAGACAGGCA  650

seq1  ATCTCTCATTAGGCTACATCACCAGCTCTGCCCATTTGCTTTCAATTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCATTAGGCTACATCACCAGCTCTGCCCATTTGCTTTCAATTTAT  700

seq1  AGACAGCAAGTCAGGTTGACAGCAAGTTTGGATGAAGTGGATGTGATCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCAAGTCAGGTTGACAGCAAGTTTGGATGAAGTGGATGTGATCCA  750

seq1  TCTCACTAATTTTCCCACAGTGAACCTGTCAGTCATGGTACAGCAGTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTAATTTTCCCACAGTGAACCTGTCAGTCATGGTACAGCAGTCAG  800

seq1  TAAGCAATACAAAAACAAAGTGAAATTGGGGTATCTGTCCAGTGGTTGTA  850
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAATAC-AAAACAAAGTGAAATTGGGGTATCTGTCCAGTGGTTGTA  849

seq1  CTACAGAGATTAACACTGATGATGAAAGGTCTTCTTTTTCCTCCATGTTA  900
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTACAGAGATTAACACTGATGATGAAAGGTCTTC-TTTTCCTCCATGTTA  898

seq1  TGAAACATAGGCTATTTCATGGTAGTATCAGGCTAACAACAACAAAAATA  950
      |||||||||||||||||||||||||||||||||||   ||||| ||||||
seq2  TGAAACATAGGCTATTTCATGGTAGTATCAGGCTA--CACAAC-AAAATA  945

seq1  GCAGGAAACAGATAGCATTTTCAGGTGCTGTTGTTAAGGAAAATCCATTG  1000
      ||||||||||||||||||||||| ||||||||||||||  |||| |||||
seq2  GCAGGAAACAGATAGCATTTTCA-GTGCTGTTGTTAAG--AAAT-CATTG  991

seq1  CATAGGGCATTTGCAAAGAGAGGCAGAGCCCACAGGCAGAGATGAGTGAT  1050
      |||||||||||||| |||||||||  |||||||||||| | |||||||||
seq2  CATAGGGCATTTGC-AAGAGAGGCGAAGCCCACAGGCAAAAATGAGTGAT  1040

seq1  TACAACTCTCTATTTCCCTGCAAGGATGCCTTCCTTATCTTGATGGTCTA  1100
      |||||||||||| |||||||||| |||||||    ||||||||||| || 
seq2  TACAACTCTCTA-TTCCCTGCAA-GATGCCT---CTATCTTGATGGCCTG  1085

seq1  GATCTCCTGAAACTATAAATGAAAATAAACCTTTCCCCTCTTCGGGTACT  1150
        |||||||||  |||||||||||   ||||||| ||||| ||||| |  
seq2  ATTCTCCTGAACTTATAAATGAAA--TAACCTTT-CCCTC-TCGGG-ATC  1130

seq1  TCTTGACAAG  1160
      ||||||||||
seq2  TCTTGACAAG  1140