BAC Information

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BAC

Clone NameB6Ng01-125B13
Chromosome3 (Build37)
Map Location 18,013,276 - 18,013,831
singlet/doubletsinglet
Overlap geneCyp7b1
Upstream geneLOC100040059, EG383936, LOC622737, ENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5
Downstream geneLOC622921, LOC100040153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125B13.bB6Ng01-125B13.g
ACCDH927831DH927832
length8981,151
definitionDH927831|Mus musculus domesticus DNA, BAC clone: B6Ng01-125B13, 5' end.DH927832|Mus musculus domesticus DNA, BAC clone: B6Ng01-125B13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgtaccccagaaagtgtagaacgtgcatgttg
agagtatactctcaacttttattcctgttgtcccatactgcaattgctct
ctttctataaattaaacagtctttcatcagatcaacatgcacattctaca
ctttctttattcatctgtcagtgtgtatttaacttgtatccatcttgtag
ctattgtgactagccttccaatgaacataaaggtgctaatatctcttcaa
gattctgatctatgttttcagtaaacaactgggattgttggatcatctgg
tagttgtcttctcatcttgaggaatcttcctcttcctcttcctcttcctc
ttcctcttcctcttcctcttcctcttcctcttcctcttcctcttcttctt
cttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttct
tctttgcatttgtaacattaatatggaaagatttgaatttcttcagagcc
acagccagcagtggttgtcttctgttaagagagtgagtgaaatttaataa
taagttgggtttgtttgtttgtttgctcacttgcttgatttgtttgtttt
gttttacatttctttgagttcctttctttaaatacatgttggccacttat
atgtcttctttggatacatgcctgtacaagtctccagcatatttcttaaa
caagctgttaaaagtttcactttacattgtaagaattccttatgctctct
gaagataggctctgtatcagtgcatgatttgtaaatgttttctttcattc
tgttttgctcttggatgtgtagaagctttttggtttctgtgctctgttta
ctttttgttctgttgcttttggtgtcaaatctctggaaaatgccaagg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaacg
ttcaacatccttaatcatcaggaaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaatccaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacattgtactacctgaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactattcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccaa
tgagactagaagaaagtacctagagctaaagggatctgcaccctatagtg
acacattatgactaccagtacccggagctcttgactctagctgctatgta
tcaaagaagcctagtcgtcattcactgaagaagcaatggaactcaacttt
aatgccagtacagggaacgccaggccagatggaagtggttgtcatagaaa
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_18013276_18013831
seq2: B6Ng01-125B13.b_49_604 (reverse)

seq1  AACTTATTATTAAATTTCACTCACTCTCTTAACAGAAGACAACCACTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTATTATTAAATTTCACTCACTCTCTTAACAGAAGACAACCACTGCT  50

seq1  GGCTGTGGCTCTGAAGAAATTCAAATCTTTCCATATTAATGTTACAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGGCTCTGAAGAAATTCAAATCTTTCCATATTAATGTTACAAATG  100

seq1  CAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG  150

seq1  AAGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAA  200

seq1  GAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGATTCCTCAAGATGAGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGATTCCTCAAGATGAGAAGA  250

seq1  CAACTACCAGATGATCCAACAATCCCAGTTGTTTACTGAAAACATAGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTACCAGATGATCCAACAATCCCAGTTGTTTACTGAAAACATAGATC  300

seq1  AGAATCTTGAAGAGATATTAGCACCTTTATGTTCATTGGAAGGCTAGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTTGAAGAGATATTAGCACCTTTATGTTCATTGGAAGGCTAGTCA  350

seq1  CAATAGCTACAAGATGGATACAAGTTAAATACACACTGACAGATGAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCTACAAGATGGATACAAGTTAAATACACACTGACAGATGAATAA  400

seq1  AGAAAGTGTAGAATGTGCATGTTGATCTGATGAAAGACTGTTTAATTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTGTAGAATGTGCATGTTGATCTGATGAAAGACTGTTTAATTTAT  450

seq1  AGAAAGAGAGCAATTGCAGTATGGGACAACAGGAATAAAAGTTGAGAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAGAGCAATTGCAGTATGGGACAACAGGAATAAAAGTTGAGAGTA  500

seq1  TACTCTCAACATGCACGTTCTACACTTTCTGGGGTACAGAGCTAAACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTCAACATGCACGTTCTACACTTTCTGGGGTACAGAGCTAAACAAA  550

seq1  GAATTC  556
      ||||||
seq2  GAATTC  556