BAC Information

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BAC

Clone NameB6Ng01-126F22
Chromosome3 (Build37)
Map Location 91,269,075 - 91,405,334
singlet/doubletdoublet
Overlap genenone
Upstream geneNpr1, LOC668141, Ilf2, Snapap, 2500003M10Rik, S100a1, S100a13, S100a14, S100a16, EG628324, S100a3, S100a4, S100a5, S100a6, S100a7a, S100a8, S100a9, LOC668165, LOC383949, Pglyrp4, LOC329706, EG545541, LOC635737, EG668174, LOC668179, LOC635756, 4930529C04Rik, 9130204L05Rik
Downstream geneLOC100042463, Pglyrp3, EG619750, Lor, A030004J04Rik, Sprr2a, LOC100042999, LOC545543, LOC100043005, LOC545545, LOC100042514, LOC619984, Sprr2b, Sprr2c, Sprr2d, Sprr2e, Sprr2f, Sprr2g, Sprr2h, Sprr2i, Sprr2j, LOC100043022, Sprr2k, Sprr1b, Sprr3, LOC100042575, Sprr1a, Sprr4, LOC100042581, Ivl, Smcp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126F22.bB6Ng01-126F22.g
ACCDH928757DH928758
length1,206894
definitionDH928757|Mus musculus domesticus DNA, BAC clone: B6Ng01-126F22, 5' end.DH928758|Mus musculus domesticus DNA, BAC clone: B6Ng01-126F22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,404,105 - 91,405,334)(91,269,075 - 91,269,976)
sequence
gaattcagtaacataccacatgtctgaagttatatctcaactcaatgctt
cacttagatgtcagaataggaacctgtcctaccaggggagctattcagag
caatagtaacacaagacattcctgtacaccataaattgcatcctgagtcc
tgcagcagtaatactccattcctcctgttcctgcatgggtggacatcatc
ttaaaatttcaccccaaactcttgctaagcaagaggtggtcacatagatt
gttggccaggttccaagttagtcttcctctcataaggagaggaacagcta
gcacatgaatttctattcataaaaatgaggcattaacagcaccttggtcc
cagccaatgatgtaaactcaaccagataattcatacccactctccaagat
ttatatagcccttgtttaccccactaaacagtcttttcaataaaaacctt
ctctgcagacagctgttcttcccatagtaaggtcagcgaacagatcttgt
aacccattccccttgctaaatttcattatttccagttctagcatggtatg
aaaatgtgtctgcaaatctgaaaggaataggcagacctaggccaggatat
cggcaatttatttctcatcagtcttcagtattgccattcaaagactgaaa
gaatctttaattcattccctgagatgtatgttttcccaccttaactccac
tcaattccataaaatggttgtctgaatgatacttggcatagatatataaa
ctatagtttgacctccaaagagtaattatataggcaatcgatatgttagt
acaccaagtatttaagggttacaaaatttaagggtctgtgagagaccaaa
tgtttaagggcacatactgcccttatggtgtaaagtccaagttcatttct
ccgtattcacaatagggagcttactccagctgaaacttcaggtcagggta
ggtgagatgtttcgccactggatgtcaaatgcaccaatatcacacattta
taccatgcaatctcttcaaatagtaatatttcaagaaagtactataaact
caaatctacataataggcaaacattatccctgggatttacatacatgccc
acacctttatgactgacaaatatctggtcactgaataaaaaaatgtggcc
tatattaactgctcatggacgaatttacctattgtggcctgaccctattt
tgagtt
gaattcctatggattgcacgttttccttatggaggcaaggtagacatggg
cataaacttcttcacaaatatacagacaacatttgaaatgagtaaatttc
cttatatttctgatccaggaactaatccttgagaggcagatgaagtatca
ttcactcccggaagtctcttttatagagtgaacagaatcatgttgtcagc
tgacctctctatctcttttggtttcctgtgaacatatgacaatgctgact
gggcctcttgtcttaaccagtttggcctcatgggatgggggaaagttttc
ttaattcttgtctaaattgcttttgttgagtgacaactgtccttaagtca
aatgacagatatggtccttagtgttctctttcctaaaggctgatgtagat
tagatgtttagtggcatttctctggaggaaacacatcactgcttaaattg
gaatcttaccagtggctgacacacttcgaaaatcataaggtgatctttga
agttcactttaatactagttacccttttcatttttgaaaaactatagttc
tgggaaaccatctattatcatatcaaagacagtgttgacaggagtatgag
gcatttcattattttctttgtagccaggaaagtggtgaatgaaagtaagt
aattaaatagggttctctttttttatcaagtccaagcacaataattagtt
cctcaatttagggtgagccctctgacctcagttcagctagtctagattat
cctttgcaagcctgtatatccaataatctaaatctgttaaaccaaataaa
atattatgcatcatatataccaatgcaatatttaaaatagtatttatata
aatgtagctattatgtggatcctgatttaccacctccacatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_91404105_91405334
seq2: B6Ng01-126F22.b_48_1253 (reverse)

seq1  AACTCAAAATAGGAGTCATGTCACAATTATAAGTAAATATCTGTCCCATG  50
      ||||||||||||| |||| | ||||   ||| |||||| || || |||||
seq2  AACTCAAAATAGG-GTCAGGCCACA---ATAGGTAAAT-TC-GT-CCATG  43

seq1  AAGCAGTTTAAATTTATAGCAACATATTTTTTTAATCAGTGACCAGTATT  100
       ||||||| |    |||||   || ||||||||| |||||||||||   |
seq2  -AGCAGTTAA----TATAG-GCCACATTTTTTTATTCAGTGACCAGATAT  87

seq1  TTGTCAGTTCATAAA-GTGTGTGCATGTATGTAAATTCTCAGTGAATAAT  149
      ||||||| ||||||| ||||| ||||||||||||| || ||| | |||||
seq2  TTGTCAG-TCATAAAGGTGTGGGCATGTATGTAAA-TCCCAG-GGATAAT  134

seq1  GTTTGCTTTATTATGTAGATTTGAGTTTTATAGTACTTTTCTTTGAAATA  199
      ||||||  ||||||||||||||||| |||||||||||||   ||||||||
seq2  GTTTGC-CTATTATGTAGATTTGAG-TTTATAGTACTTT--CTTGAAATA  180

seq1  TTTACTATTTTGAAGAGATTGCATGGTTATAAATGTGTGGATATTGGTGC  249
       |||||| |||||||||||||||||| ||||||||||| |||||||||||
seq2  -TTACTA-TTTGAAGAGATTGCATGG-TATAAATGTGT-GATATTGGTGC  226

seq1  ATTTGACATCCAGTGGCGAAACATCTCACCTACCCTGACCCTGAAGTTTC  299
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATTTGACATCCAGTGGCGAAACATCTCACCTACCCTGA-CCTGAAGTTTC  275

seq1  AGCTGGAGTAAGCTCCCTATTGTGAATACGGAGAAATGAACTTGGACTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGAGTAAGCTCCCTATTGTGAATACGGAGAAATGAACTTGGACTTT  325

seq1  ACACCATAAGGGCAGTATGTGCCCTTAAACATTTGGTCTCTCACAGACCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATAAGGGCAGTATGTGCCCTTAAACATTTGGTCTCTCACAGACCC  375

seq1  TTAAATTTTGTAACCCTTAAATACTTGGTGTACTAACATATCGATTGCCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTTGTAACCCTTAAATACTTGGTGTACTAACATATCGATTGCCT  425

seq1  ATATAATTACTCTTTGGAGGTCAAACTATAGTTTATATATCTATGCCAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATTACTCTTTGGAGGTCAAACTATAGTTTATATATCTATGCCAAG  475

seq1  TATCATTCAGACAACCATTTTATGGAATTGAGTGGAGTTAAGGTGGGAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTCAGACAACCATTTTATGGAATTGAGTGGAGTTAAGGTGGGAAA  525

seq1  ACATACATCTCAGGGAATGAATTAAAGATTCTTTCAGTCTTTGAATGGCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATCTCAGGGAATGAATTAAAGATTCTTTCAGTCTTTGAATGGCA  575

seq1  ATACTGAAGACTGATGAGAAATAAATTGCCGATATCCTGGCCTAGGTCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGAAGACTGATGAGAAATAAATTGCCGATATCCTGGCCTAGGTCTG  625

seq1  CCTATTCCTTTCAGATTTGCAGACACATTTTCATACCATGCTAGAACTGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTCCTTTCAGATTTGCAGACACATTTTCATACCATGCTAGAACTGG  675

seq1  AAATAATGAAATTTAGCAAGGGGAATGGGTTACAAGATCTGTTCGCTGAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGAAATTTAGCAAGGGGAATGGGTTACAAGATCTGTTCGCTGAC  725

seq1  CTTACTATGGGAAGAACAGCTGTCTGCAGAGAAGGTTTTTATTGAAAAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTATGGGAAGAACAGCTGTCTGCAGAGAAGGTTTTTATTGAAAAGA  775

seq1  CTGTTTAGTGGGGTAAACAAGGGCTATATAAATCTTGGAGAGTGGGTATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTAGTGGGGTAAACAAGGGCTATATAAATCTTGGAGAGTGGGTATG  825

seq1  AATTATCTGGTTGAGTTTACATCATTGGCTGGGACCAAGGTGCTGTTAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCTGGTTGAGTTTACATCATTGGCTGGGACCAAGGTGCTGTTAAT  875

seq1  GCCTCATTTTTATGAATAGAAATTCATGTGCTAGCTGTTCCTCTCCTTAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCATTTTTATGAATAGAAATTCATGTGCTAGCTGTTCCTCTCCTTAT  925

seq1  GAGAGGAAGACTAACTTGGAACCTGGCCAACAATCTATGTGACCACCTCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAAGACTAACTTGGAACCTGGCCAACAATCTATGTGACCACCTCT  975

seq1  TGCTTAGCAAGAGTTTGGGGTGAAATTTTAAGATGATGTCCACCCATGCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAGCAAGAGTTTGGGGTGAAATTTTAAGATGATGTCCACCCATGCA  1025

seq1  GGAACAGGAGGAATGGAGTATTACTGCTGCAGGACTCAGGATGCAATTTA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGGAGGAATGGAGTATTACTGCTGCAGGACTCAGGATGCAATTTA  1075

seq1  TGGTGTACAGGAATGTCTTGTGTTACTATTGCTCTGAATAGCTCCCCTGG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTACAGGAATGTCTTGTGTTACTATTGCTCTGAATAGCTCCCCTGG  1125

seq1  TAGGACAGGTTCCTATTCTGACATCTAAGTGAAGCATTGAGTTGAGATAT  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACAGGTTCCTATTCTGACATCTAAGTGAAGCATTGAGTTGAGATAT  1175

seq1  AACTTCAGACATGTGGTATGTTACTGAATTC  1230
      |||||||||||||||||||||||||||||||
seq2  AACTTCAGACATGTGGTATGTTACTGAATTC  1206

seq1: chr3_91269075_91269976
seq2: B6Ng01-126F22.g_66_959

seq1  GAATTCCTATGGATTGCACGTTTTCCTTATGGAGGCAAGGTAGACATGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATGGATTGCACGTTTTCCTTATGGAGGCAAGGTAGACATGGG  50

seq1  CATAAACTTCTTCACAAATATACAGACAACATTTGAAATGAGTAAATTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAACTTCTTCACAAATATACAGACAACATTTGAAATGAGTAAATTTC  100

seq1  CTTATATTTCTGATCCAGGAACTAATCCTTGAGAGGCAGATGAAGTATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATTTCTGATCCAGGAACTAATCCTTGAGAGGCAGATGAAGTATCA  150

seq1  TTCACTCCCGGAAGTCTCTTTTATAGAGTGAACAGAATCATGTTGTCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTCCCGGAAGTCTCTTTTATAGAGTGAACAGAATCATGTTGTCAGC  200

seq1  TGACCTCTCTATCTCTTTTGGTTTCCTGTGAACATATGACAATGCTGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCTCTATCTCTTTTGGTTTCCTGTGAACATATGACAATGCTGACT  250

seq1  GGGCCTCTTGTCTTAACCAGTTTGGCCTCATGGGATGGGGGAAAGTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCTTGTCTTAACCAGTTTGGCCTCATGGGATGGGGGAAAGTTTTC  300

seq1  TTAATTCTTGTCTAAATTGCTTTTGTTGAGTGACAACTGTCCTTAAGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCTTGTCTAAATTGCTTTTGTTGAGTGACAACTGTCCTTAAGTCA  350

seq1  AATGACAGATATGGTCCTTAGTGTTCTCTTTCCTAAAGGCTGATGTAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAGATATGGTCCTTAGTGTTCTCTTTCCTAAAGGCTGATGTAGAT  400

seq1  TAGATGTTTAGTGGCATTTCTCTGGAGGAAACACATCACTGCTTAAATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTTTAGTGGCATTTCTCTGGAGGAAACACATCACTGCTTAAATTG  450

seq1  GAATCTTACCAGTGGCTGACACACTTCGAAAATCATAAGGTGATCTTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTACCAGTGGCTGACACACTTCGAAAATCATAAGGTGATCTTTGA  500

seq1  AGTTCACTTTAATACTAGTTACCCTTTTCATTTTTGAAAAACTATAGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCACTTTAATACTAGTTACCCTTTTCATTTTTGAAAAACTATAGTTC  550

seq1  TGGGAAACCATCTATTATCATATCAAAGACAGTGTTGACAGGAGTATGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAACCATCTATTATCATATCAAAGACAGTGTTGACAGGAGTATGAG  600

seq1  GCATTTCATTATTTTCTTTGTAGCCAGGAAAGTGGTGAATGAAAGTAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCATTATTTTCTTTGTAGCCAGGAAAGTGGTGAATGAAAGTAAGT  650

seq1  AATTAAATAGGGTTCTC-TTTTTTATCAAGTCCAAGCACAATAATTAGTT  699
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AATTAAATAGGGTTCTCTTTTTTTATCAAGTCCAAGCACAATAATTAGTT  700

seq1  CCTCAATTTAGGGTGAGCCCTCTGACCTCAGTTCAGCTAGTCTAGATTAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAATTTAGGGTGAGCCCTCTGACCTCAGTTCAGCTAGTCTAGATTAT  750

seq1  CCTTTGCAAGCCTGTATATTCAATAATTCTAAATTCTGTTAAACCAAAAT  799
      ||||||||||||||||||| |||||| |||||| ||||||||||| ||||
seq2  CCTTTGCAAGCCTGTATATCCAATAA-TCTAAA-TCTGTTAAACC-AAAT  797

seq1  AAAATATTATGCATCATATATACCAAATGCAAATAATTTAAAATAGTATT  849
      |||||||||||||||||||||||| |||||||   |||||||||||||||
seq2  AAAATATTATGCATCATATATACC-AATGCAA--TATTTAAAATAGTATT  844

seq1  TATATTAAAATGGTAGCTATTATGT-GATCCTGATTTAACTACCTCCACA  898
      |||||  |||| ||||||||||||| ||||||||||| || |||||||||
seq2  TATAT--AAAT-GTAGCTATTATGTGGATCCTGATTT-ACCACCTCCACA  890

seq1  TTTT  902
      ||||
seq2  TTTT  894