BAC Information

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BAC

Clone NameB6Ng01-128E16
Chromosome3 (Build37)
Map Location 43,676,213 - 43,677,012
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039219, LOC677788, LOC100039264
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128E16.bB6Ng01-128E16.g
ACCDH930181DH930182
length800935
definitionDH930181|Mus musculus domesticus DNA, BAC clone: B6Ng01-128E16, 5' end.DH930182|Mus musculus domesticus DNA, BAC clone: B6Ng01-128E16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgtatagaagttacatctaattgagaggtacaaaaggtgatga
atcagaaaaagacctggcagaatgaatcagagagagaagacacccaactc
tcaagaggagagtgaattggaagtaagtcagttcagttcaattctgtcag
ttaggagtcagtgaattgcagtatagtatagttgagttcattcataattt
aattctggtaagtatagctcagcagagttagttgttgccagagtataaga
aggagcctgaagattagaaaaaaatatatagagagatcagattagtttga
ggccaagaagagcaattcagtgagaggcacagagaagccaatttaaatca
gtcaacatagagagaatttgggccagaacaacttatttgaaacagccagc
cagagttcagaaagaactagaaagagtaagtttattcagcagcaagcctc
tgagacatttacatcatatgaataaaagttattaacttcaaaaatagaag
aaatatccagtgccacaaaaaaaaaatgagtattcactttatgtgaaaga
agtaacactaaatgtataatactgaaacgattctgaaaaaaaaaattagt
ttatcaaacagaaaatgcatgtacatcacaggtaattcatgtcaaggaaa
gcagaaggaaaatggaattctgcaaaagcatgttcatgaggaacattctg
aattacaaatatgaatatgttcaagagcatcagaaaaattaatgggatat
ttattagttttgctagtggtagtagtggtagtcgtggtggtggtggtgat

gaattcccttagaatgtggttaagccacatattcctgggctaatgatgcg
tactaaagccggatgccagggatgctggttttccccttggaaggggagaa
tacactgctgcttttcacagcaaggctctaagctcactataaggagacca
tgtcacaatgaagagaaatgctgggcacatttcacatgactactcaggaa
ggaccatgatacaccacagaatgacacaagaataatgtggttgggagtca
ggccaacttgcagtgagtcaccagtttgttccaaacagatcagggcgagt
aattttaagaaaagtagaacacattataggggaatagcaggaggggctac
taattaggcaaaagtaatttcatgattttgaaaacaaaaagtctgagcaa
aatttttttttttttttttttttttttttttgttcaatcctggtagtctt
gctccctttttccctttccctgtccctttctgtttttcccttttcccttt
tcccttttccctttcccttttcccttttccctttttatcctttttcctta
tccctttcccccttttccccctttttcccttttcccccttttttccctat
tttccctattttccattttatcccttgtttcccctttttccttgtttccc
ccttttccctttttcctttttatcttttatcctttttcccctccccatcc
cctttttcccattcccctttcccttctttaccttttctcttccccttcct
ccccttccactttcccagttcacttatttccctttcccttctttccccgt
ccccttcttcaccgagctttatctttcactttaccccttcttcccttcca
cttcattccccctctccttgaactttttccccgtaaccaactctcctccc
ctttcccttatcaccttccccttccccggcttcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_43676213_43677012
seq2: B6Ng01-128E16.b_48_847

seq1  GAATTCTTGTATAGAAGTTACATCTAATTGAGAGGTACAAAAGGTGATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTATAGAAGTTACATCTAATTGAGAGGTACAAAAGGTGATGA  50

seq1  ATCAGAAAAAGACCTGGCAGAATGAATCAGAGAGAGAAGACACCCAACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAAAAGACCTGGCAGAATGAATCAGAGAGAGAAGACACCCAACTC  100

seq1  TCAAGAGGAGAGTGAATTGGAAGTAAGTCAGTTCAGTTCAATTCTGTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAGGAGAGTGAATTGGAAGTAAGTCAGTTCAGTTCAATTCTGTCAG  150

seq1  TTAGGAGTCAGTGAATTGCAGTATAGTATAGTTGAGTTCATTCATAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAGTCAGTGAATTGCAGTATAGTATAGTTGAGTTCATTCATAATTT  200

seq1  AATTCTGGTAAGTATAGCTCAGCAGAGTTAGTTGTTGCCAGAGTATAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGGTAAGTATAGCTCAGCAGAGTTAGTTGTTGCCAGAGTATAAGA  250

seq1  AGGAGCCTGAAGATTAGAAAAAAATATATAGAGAGATCAGATTAGTTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCCTGAAGATTAGAAAAAAATATATAGAGAGATCAGATTAGTTTGA  300

seq1  GGCCAAGAAGAGCAATTCAGTGAGAGGCACAGAGAAGCCAATTTAAATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAGAAGAGCAATTCAGTGAGAGGCACAGAGAAGCCAATTTAAATCA  350

seq1  GTCAACATAGAGAGAATTTGGGCCAGAACAACTTATTTGAAACAGCCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACATAGAGAGAATTTGGGCCAGAACAACTTATTTGAAACAGCCAGC  400

seq1  CAGAGTTCAGAAAGAACTAGAAAGAGTAAGTTTATTCAGCAGCAAGCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTCAGAAAGAACTAGAAAGAGTAAGTTTATTCAGCAGCAAGCCTC  450

seq1  TGAGACATTTACATCATATGAATAAAAGTTATTAACTTCAAAAATAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACATTTACATCATATGAATAAAAGTTATTAACTTCAAAAATAGAAG  500

seq1  AAATATCCAGTGCCACAAAAAAAAAATGAGTATTCACTTTATGTGAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCCAGTGCCACAAAAAAAAAATGAGTATTCACTTTATGTGAAAGA  550

seq1  AGTAACACTAAATGTATAATACTGAAACGATTCTGAAAAAAAAAATTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACACTAAATGTATAATACTGAAACGATTCTGAAAAAAAAAATTAGT  600

seq1  TTATCAAACAGAAAATGCATGTACATCACAGGTAATTCATGTCAAGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAAACAGAAAATGCATGTACATCACAGGTAATTCATGTCAAGGAAA  650

seq1  GCAGAAGGAAAATGGAATTCTGCAAAAGCATGTTCATGAGGAACATTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGGAAAATGGAATTCTGCAAAAGCATGTTCATGAGGAACATTCTG  700

seq1  AATTACAAATATGAATATGTTCAAGAGCATCAGAAAAATTAATGGGATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACAAATATGAATATGTTCAAGAGCATCAGAAAAATTAATGGGATAT  750

seq1  TTATTAGTTTTGCTAGTGGTAGTAGTGGTAGTCGTGGTGGTGGTGGTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGTTTTGCTAGTGGTAGTAGTGGTAGTCGTGGTGGTGGTGGTGAT  800