BAC Information

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BAC

Clone NameB6Ng01-134O01
Chromosome3 (Build37)
Map Location 152,423,303 - 152,424,408
singlet/doubletsinglet
Overlap genePigk
Upstream geneH28, Ptgfr, LOC100040741, LOC100040597, LOC676548, Gipc2, Dnajb4, Fubp1, Nexn, C030011O14Rik, Usp33, Zzz3, Ak5, LOC100040705
Downstream geneRpl29-ps1, St6galnac5, LOC100040750, St6galnac3, EG545578
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134O01.bB6Ng01-134O01.g
ACCDH935065DH935066
length1,1061,232
definitionDH935065|Mus musculus domesticus DNA, BAC clone: B6Ng01-134O01, 5' end.DH935066|Mus musculus domesticus DNA, BAC clone: B6Ng01-134O01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctctcttgaagattatttatgttggctttcctgggattagt
aatggccattaatctggagttggatcaaggagatgagctaatttacaagg
gagagttttcagttcaagagcgccctcttctgtagctgaaacgaactgca
gcttacttaataaagtagccgatgtaccggggtgggatttttaaatactc
ccttgctttcataaagcccttccttactctttttgtccacatctaacact
tctgggcaccgtgtccccaccctcctcttcacaacgtcctctgttctcat
agaattgtcgctttcctaatcatggtgcataaggtcaccaagctctctac
tcagcatttgtaattctgagaaaactacaggtgctcattccaacttacgc
atggctggaaccccaaacacctccttctttcctcttatgaataatgtgtg
ttctccttcttaaggtcattcttttacttaagattttgagagctctaaga
cactcactggctccagaggttatctctccattttctctttccaagactgg
gctaagaagctctactgacagcatttcatgaaggaacaatttctgcacag
gaggctgtgccgtttttccttgtgtcactgtgtctcagacaatggcattt
cacagatacaagccgagtctcttcactgtggaagggttctgaatccaaca
cagcaaagctacaatctgtgctgaaagtgattaaaatactgcccaacccc
tctgtgaagttgaaaaagacagagcaggctcaagagaagctcacaaaatc
agtttacaatcctccttttgtgtccttgtttctctatcttagatgcccag
tggcctcagaaactctttactctgctactgaagcactcttagaacaagtc
tctaaaattatttacagtgcccatacataaagccatctctgacccagagt
gttttcctcccacatgccatgctgaaatcaggattattcattttataaac
tgacagagctttttggggcctaaagccaaagcattcttctaagaattgaa
accacacggtaagaaacagaggtttttctttgttggataccaacaataat
caataa
gaattcagattaattgcattgacaaaggaggtctcaagaaagctcagcat
tgactttggcctctggtttattctcatgaggagcatgttgatcaagcata
gcaagcttagaaacaaaaagtacaaaatgtatggttcaaagggtcaccag
aatattaaatggaatcaagggagtagtgacctcaaggcaggatcccaccc
agctaagcttactgtttatgcatttgcagttgaacaatggatagttatat
catgataggcatttttaagacttggttattgttttcatctggacataaaa
aatattatggtgtgtcaaattgacaagggaaggattgtgatggccattcg
agattgtcagtttgactatctggaatgaactacaatctataacttataaa
gatcatgtgagaaggaagtaaagagaagtttaagtccaggcatagtggta
catgcctttaatcccaggagccagagacaagtaggtctttgagttcaagg
ccaacctggtacagagcaagttccaagtaaagaaaaatttaggtcttggt
gtgcttgtacacatctttaataccaaactttaggaaacagaagcatgtag
atttctgagttcaaggtcagtttacagatccgatcccaggacagccaagc
ttaggcagtgaagaagttggaaaatagaaagctggtgataatgtatataa
taaggggggcatgttccccacaaagcaacagaacttggtagctttggcca
tgtagctctggctttagagttaagaatagaaggggttactgagacaattt
gacattgatactggttagttagagctaagaaataatgatgattaagaaga
gaccagcatcactgctgtgaattcttctgggaaaggttttctgagaacac
aaagaagctgtgttcagagatcgccaaggctgtacctcgtgctgcagcta
gacttggtaattttgtaagagtcactcagttggcacgggtatgactcatg
aaaggtacatggaagaacagttgaggcttgcctcattgaaaaggcaagat
agaaccattgatgaaggtacagcttccatagccgttggcccaagacctga
atggggttattatatagacattgaagccttggccgacgaaagaggcccta
gtagagggctatttgtaccctattctgggaagcccacaatggagatgcgg
actcgtggtagtggtctacctaaatcagttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_152423303_152424408
seq2: B6Ng01-134O01.b_45_1150 (reverse)

seq1  TTATTGATTTTATTGTTAGTATCAACCATAGAACAACCTCTG-TTCTTAC  49
      |||||||  |||||||| ||||| | || |||| |||||||| |||||||
seq2  TTATTGA--TTATTGTTGGTATCCAACAAAGAAAAACCTCTGTTTCTTAC  48

seq1  AGT-TGTTTTCAATTCTTAGAAGAATGCTTTGGCCTTTAGGCCCCAATAA  98
       || || |||||||||||||||||||||||||| ||||||||||||| ||
seq2  CGTGTGGTTTCAATTCTTAGAAGAATGCTTTGG-CTTTAGGCCCCAAAAA  97

seq1  GCTCTGTCAGTTTAT-ACATGAATAAT-CTGATTTCAGCATGGCATTGTG  146
      ||||||||||||||| | ||||||||| ||||||||||||||||| ||||
seq2  GCTCTGTCAGTTTATAAAATGAATAATCCTGATTTCAGCATGGCA-TGTG  146

seq1  GGAGG-AAACACTCTTGAGTCAGAGATGGCTTTATGTATGGGCACTGTAA  195
      ||||| |||||||| || ||||||||||||||||||||||||||||||||
seq2  GGAGGAAAACACTC-TGGGTCAGAGATGGCTTTATGTATGGGCACTGTAA  195

seq1  ATAATTTTAGAGACTTGTTCTAAGAGTGCTTCAGTAGCAGAGTAAAGAGT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTAGAGACTTGTTCTAAGAGTGCTTCAGTAGCAGAGTAAAGAGT  245

seq1  TTCTGAGGCCACTGGGCATCTAAGATAGAGAAACAAGGACACAAAAGGAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGGCCACTGGGCATCTAAGATAGAGAAACAAGGACACAAAAGGAG  295

seq1  GATTGTAAACTGATTTTGTGAGCTTCTCTTGAGCCTGCTCTGTCTTTTTC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTAAACTGATTTTGTGAGCTTCTCTTGAGCCTGCTCTGTCTTTTTC  345

seq1  AACTTCACAGAGGGGTTGGGCAGTATTTTAATCACTTTCAGCACAGATTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCACAGAGGGGTTGGGCAGTATTTTAATCACTTTCAGCACAGATTG  395

seq1  TAGCTTTGCTGTGTTGGATTCAGAACCCTTCCACAGTGAAGAGACTCGGC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTGCTGTGTTGGATTCAGAACCCTTCCACAGTGAAGAGACTCGGC  445

seq1  TTGTATCTGTGAAATGCCATTGTCTGAGACACAGTGACACAAGGAAAAAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATCTGTGAAATGCCATTGTCTGAGACACAGTGACACAAGGAAAAAC  495

seq1  GGCACAGCCTCCTGTGCAGAAATTGTTCCTTCATGAAATGCTGTCAGTAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGCCTCCTGTGCAGAAATTGTTCCTTCATGAAATGCTGTCAGTAG  545

seq1  AGCTTCTTAGCCCAGTCTTGGAAAGAGAAAATGGAGAGATAACCTCTGGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTTAGCCCAGTCTTGGAAAGAGAAAATGGAGAGATAACCTCTGGA  595

seq1  GCCAGTGAGTGTCTTAGAGCTCTCAAAATCTTAAGTAAAAGAATGACCTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTGAGTGTCTTAGAGCTCTCAAAATCTTAAGTAAAAGAATGACCTT  645

seq1  AAGAAGGAGAACACACATTATTCATAAGAGGAAAGAAGGAGGTGTTTGGG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGAGAACACACATTATTCATAAGAGGAAAGAAGGAGGTGTTTGGG  695

seq1  GTTCCAGCCATGCGTAAGTTGGAATGAGCACCTGTAGTTTTCTCAGAATT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAGCCATGCGTAAGTTGGAATGAGCACCTGTAGTTTTCTCAGAATT  745

seq1  ACAAATGCTGAGTAGAGAGCTTGGTGACCTTATGCACCATGATTAGGAAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGCTGAGTAGAGAGCTTGGTGACCTTATGCACCATGATTAGGAAA  795

seq1  GCGACAATTCTATGAGAACAGAGGACGTTGTGAAGAGGAGGGTGGGGACA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGACAATTCTATGAGAACAGAGGACGTTGTGAAGAGGAGGGTGGGGACA  845

seq1  CGGTGCCCAGAAGTGTTAGATGTGGACAAAAAGAGTAAGGAAGGGCTTTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGCCCAGAAGTGTTAGATGTGGACAAAAAGAGTAAGGAAGGGCTTTA  895

seq1  TGAAAGCAAGGGAGTATTTAAAAATCCCACCCCGGTACATCGGCTACTTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGCAAGGGAGTATTTAAAAATCCCACCCCGGTACATCGGCTACTTT  945

seq1  ATTAAGTAAGCTGCAGTTCGTTTCAGCTACAGAAGAGGGCGCTCTTGAAC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTAAGCTGCAGTTCGTTTCAGCTACAGAAGAGGGCGCTCTTGAAC  995

seq1  TGAAAACTCTCCCTTGTAAATTAGCTCATCTCCTTGATCCAACTCCAGAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACTCTCCCTTGTAAATTAGCTCATCTCCTTGATCCAACTCCAGAT  1045

seq1  TAATGGCCATTACTAATCCCAGGAAAGCCAACATAAATAATCTTCAAGAG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGCCATTACTAATCCCAGGAAAGCCAACATAAATAATCTTCAAGAG  1095

seq1  AGAAAGAATTC  1106
      |||||||||||
seq2  AGAAAGAATTC  1106