BAC Information

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BAC

Clone NameB6Ng01-137M10
Chromosome10 (Build37)3 (Build37)
Map Location 104,053,903 - 104,054,363117,046,409 - 117,047,554
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137M10.bB6Ng01-137M10.g
ACCDH937203DH937204
length7211,128
definitionDH937203|Mus musculus domesticus DNA, BAC clone: B6Ng01-137M10, 5' end.DH937204|Mus musculus domesticus DNA, BAC clone: B6Ng01-137M10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,363)(117,046,409 - 117,047,554)
sequence
gaattctcacccaaggaataccgaaaggctgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatatggagaaagaggaacactcctccattgttggtg
ggattgtaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcctgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgcttcactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gtccctcaacataggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcaaatgaaatgtactcactgataagtggatattaacccagaaac
ttagtataccgagatataaggtacagtatgtaaaacatatgaaactgaag
aagaaccaagaccaaagtgtggacactttgccccttcttagaaatggaaa
caatcacccatggaaggagtt
gaattccatttcaatatatgttttactatgtgaaagtttacatttggtgc
ctgtgttcatgtgtgtgtgaacatgtgtgtgcatatatgtgggagcgaga
cgtttatgtcgcactccctccttggtctccactttactctgctcctttgt
ccttttctgtttgtgtgtaactgtgtgtgtgactttgtgtgtgactgtgt
gtgtgagtgcagatgcacatgagccacagcactcgtgtcaaggtcaaaac
gcagccttgagtgtgggacactggctaactggcttgagaacatctagaga
ttctcctgcttctgcctcccatctctatcagatcactgggattctgggtg
tggctactacaatcctcttctgtgtgggatctgtgtggttttatgactat
gacagaggttctcgcctgggatcctcatgcttgcttggcaagtgctttaa
gggctgagcaatatcccccgcttctctaccttacgtttttgaggcagaat
ctctcactgaggtagacagttcacctaaaggcagcacacactccttgctc
ctctctccaccccagccctggaatcacagcaaaggccacccatgattacc
tttcacaggggtgttagggaccagtccagtctcaggccttcatacttgca
gcaaacactttgccaactcagccattgctccagccctaaattccccattg
tatatgactttgggatatgtcaaaattgctcttagacttcccattttaaa
tttgttattatctaaaaatgttcctttgaacaatttgcataattatattc
tttgagtccttgtattactcatagcaaaaccaagataactttgaaatctc
tgtgcaagtgtagatagatattttgagttatgttattgtattcaaaagtg
agggcgcgtcttatgtttaaacacccctatggctatgcctggagctgcat
cttcctccctatgtttcacccccccaccccccaataacacagtagagttc
actgtaagatgtactcaaacagccagaaacttctctacttgaacgcataa
actattttatgaatcttgatccgctcatccaggttctctcacatttcctc
cagaaatgaccgcctggtcctcttggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-137M10.b_47_517 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          ||||||||||||||||||||||||||| ||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAAATGTACCACATTTTTTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || |||||| ||||||||| |||||||||||||||||||| |||||||||
seq2  TCCATTCCTATGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| |||||| ||||||||||||||||||||||
seq2  ATAAATAAGGCTGCTATGAACATAGTGAAGCATGTGTCCTTCTTACCGGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||| |||||||||||||||||||||| ||||||||||| ||||||||||
seq2  TGGGACATCTTCTGGATATATGCCCAGGAGAGGTATTGCAGGATCCTCCG  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  GTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      |||||||||||| | |||||||||||||||||||||||||||||||||||
seq2  GGTTGTACAAGCTTACAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      |||||||||||||||| |||||||||||||||||||||||||||||||| 
seq2  TTCTGACTGGTGTGAGATGGAATCTCAGGGTTGTTTTGATTTGCATTTCT  400

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      ||||||||||||||||||||||||||||||||||| ||||| ||| ||||
seq2  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGTTTCTCAGCCTTTCG  450

seq1  GTATTCCTCAGGTGAGAATTC  461
      ||||||||  |||||||||||
seq2  GTATTCCTTGGGTGAGAATTC  471

seq1: chr3_117046409_117047554
seq2: B6Ng01-137M10.g_66_1193 (reverse)

seq1  ATCCAAGGAGGACCAGCCGGGTCATTTCCTGGGAAGAAATGTTGAGAGAA  50
      |||||| ||||||||| | |||||||||   ||| |||||| |||||| |
seq2  ATCCAA-GAGGACCAGGC-GGTCATTTC--TGGAGGAAATG-TGAGAG-A  44

seq1  ACCTGGATGAGCGTGATCAAAGATTCTATAAAAATAGTTTTATGGCTGTT  100
      ||||||||||||| |||| ||||||| || ||||||| ||||||   |||
seq2  ACCTGGATGAGCG-GATC-AAGATTC-AT-AAAATAG-TTTATG--CGTT  87

seq1  CAAAGTGAGATGTTTCTTGGCTGTTTGAGTACATCTGTACAGTGAACTCT  150
      |||   |||| ||||| ||||||||||||||||||| |||||||||||||
seq2  CAAGTAGAGAAGTTTC-TGGCTGTTTGAGTACATCT-TACAGTGAACTCT  135

seq1  ACTGTGTTATTTGGGGGGTGGGGGGGTGAAACATAGGGAGGAAGGATGCA  200
      ||||||||| ||||||||||||||||||||||||||||||||| ||||||
seq2  ACTGTGTTA-TTGGGGGGTGGGGGGGTGAAACATAGGGAGGAA-GATGCA  183

seq1  GCTCCAGGCATAGCCATAGGGGTGTTTAAACATAAGACGCGCCCTCACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAGGCATAGCCATAGGGGTGTTTAAACATAAGACGCGCCCTCACTT  233

seq1  TTGAATAACAATAACATAACTCAAAATATCTATCTACACTTGCACAGAGA  300
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAT-ACAATAACATAACTCAAAATATCTATCTACACTTGCACAGAGA  282

seq1  TTTCAAAGTTATCTTGGTTTTGCTATGAGTAATACAAGGACTCAAAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGTTATCTTGGTTTTGCTATGAGTAATACAAGGACTCAAAGAAT  332

seq1  ATAATTATGCAAATTGTTCAAAGGAACATTTTTAGATAATAACAAATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTATGCAAATTGTTCAAAGGAACATTTTTAGATAATAACAAATTTA  382

seq1  AAATGGGAAGTCTAAGAGCAATTTTGACATATCCCAAAGTCATATACAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGAAGTCTAAGAGCAATTTTGACATATCCCAAAGTCATATACAAT  432

seq1  GGGGAATTTAGGGCTGGAGCAATGGCTGAGTTGGCAAAGTGTTTGCTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAATTTAGGGCTGGAGCAATGGCTGAGTTGGCAAAGTGTTTGCTGCA  482

seq1  AGTATGAAGGCCTGAGACTGGACTGGTCCCTAACACCCCTGTGAAAGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGAAGGCCTGAGACTGGACTGGTCCCTAACACCCCTGTGAAAGGTA  532

seq1  ATCATGGGTGGCCTTTGCTGTGATTCCAGGGCTGGGGTGGAGAGAGGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGGTGGCCTTTGCTGTGATTCCAGGGCTGGGGTGGAGAGAGGAGC  582

seq1  AAGGAGTGTGTGCTGCCTTTAGGTGAACTGTCTACCTCAGTGAGAGATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGTGTGTGCTGCCTTTAGGTGAACTGTCTACCTCAGTGAGAGATTC  632

seq1  TGCCTCAAAAACGTAAGGTAGAGAAGCGGGGGATATTGCTCAGCCCTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCAAAAACGTAAGGTAGAGAAGCGGGGGATATTGCTCAGCCCTTAA  682

seq1  AGCACTTGCCAAGCAAGCATGAGGATCCCAGGCGAGAACCTCTGTCATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTGCCAAGCAAGCATGAGGATCCCAGGCGAGAACCTCTGTCATAG  732

seq1  TCATAAAACCACACAGATCCCACACAGAAGAGGATTGTAGTAGCCACACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAACCACACAGATCCCACACAGAAGAGGATTGTAGTAGCCACACC  782

seq1  CAGAATCCCAGTGATCTGATAGAGATGGGAGGCAGAAGCAGGAGAATCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCCCAGTGATCTGATAGAGATGGGAGGCAGAAGCAGGAGAATCTC  832

seq1  TAGATGTTCTCAAGCCAGTTAGCCAGTGTCCCACACTCAAGGCTGCGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTTCTCAAGCCAGTTAGCCAGTGTCCCACACTCAAGGCTGCGTTT  882

seq1  TGACCTTGACACGAGTGCTGTGGCTCATGTGCATCTGCACTCACACACAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTGACACGAGTGCTGTGGCTCATGTGCATCTGCACTCACACACAC  932

seq1  AGTCACACACAAAGTCACACACACAGTTACACACAAACAGAAAAGGACAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACACACAAAGTCACACACACAGTTACACACAAACAGAAAAGGACAA  982

seq1  AGGAGCAGAGTAAAGTGGAGACCAAGGAGGGAGTGCGACATAAACGTCTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCAGAGTAAAGTGGAGACCAAGGAGGGAGTGCGACATAAACGTCTC  1032

seq1  GCTCCCACATATATGCACACACATGTTCACACACACATGAACACAGGCAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCACATATATGCACACACATGTTCACACACACATGAACACAGGCAC  1082

seq1  CAAATGTAAACTTTCACATAGTAAAACATATATTGAAATGGAATTC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTAAACTTTCACATAGTAAAACATATATTGAAATGGAATTC  1128