BAC Information

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BAC

Clone NameB6Ng01-144E10
Chromosome3 (Build37)
Map Location 65,366,785 - 65,367,958
singlet/doubletsinglet
Overlap genenone
Upstream gene4930518C23Rik, EG667069, LOC100040918, 4933425M15Rik, LOC670110, Kcnab1, Ssr3, EG433604, EG667093, LOC100041083, 4931440P22Rik, Tiparp
Downstream geneLOC545530, LOC100040978, EG624866, Ccnl1, LOC625048, Veph1, Tpi-rs2, Ptx3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144E10.bB6Ng01-144E10.g
ACCDH941997DH941998
length1,1481,212
definitionDH941997|Mus musculus domesticus DNA, BAC clone: B6Ng01-144E10, 5' end.DH941998|Mus musculus domesticus DNA, BAC clone: B6Ng01-144E10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtcccacttaagatctcccaacacatttccttatagagtttca
agcatgtggctgggtgtggtagcccctgcttgtcactgcattcttggaac
ctgagaaaggaggctaactgtgagtttcaggccagcgtggcctctagggt
aaaaaactctcattcccccagagaaaacagagtaaaactgtacttttcaa
tgatttagaaattcatctatttgcctttagttttctgcttgggaaataag
aagtgtcttcctaagtaacgtaattagtgcagggagaaagaccaagggag
cacagactgccaggtgggatgggcatactgtgatgagttccagaggagcc
aaggccatttccatgaccagaccctctgcctaggagagtgtctcacaagc
ctcattttgccaagcctgacttcgtggcgtaacaatgtcagttcttagat
ggactgctcacaggactctgtgcctaagctcagcttgggctgtaagtgca
gatagggacatagctgctcctctatgtaaccgttctgtctaggacccgtg
ggcagccgtgtggctgtagctatctgctacttctgaagtgaagctgcatt
taagaagctactgtaaggtcatgaggaggtctgatgctttcttctgtccg
agcgggatctaagcagccggcttctatgtccttatgtgtggctccagtcc
ttatgtatagcacatagagatcattctagaagcagtcatctctgctctct
tcagagaggctcaattaagagcctggttttaaattttatttgtttgtttg
ttttaaattttatttgtatgtatttacttatcaagacagagctgacctgg
aaacttgcaatcttcttgcctcatgatctcaagtgctaggattataggta
tatgtcaccacatgcagacacacaaaaaagtcttttttaaatgcccttga
agactcacaaagggtcagcagcagctcagcttcgagttccatgattaaca
gattcagtgacgattacattcatctagtgttattgagtcttctattgtat
acaggcacaggtgtaggtgctggcttcaacaatcagaaacatttctccct
tgctcgaagctccattgctagcctcaagtcaacagaacaaagcccttg
gaattcactggcacaggaaaagactttctgaacagaccaccagtagcaca
ggcactaatataaaccactaatagatgagacctcatgaaactgaaaagca
ttggtatggtaaagacaccatcattcgaacaaagtgtcagtctacagaaa
aaaagatttttacaaattatacatccaatagaggtttagtatctgaacta
taacaagaactaaaaccaaccaaacaaaaaacactgaacaacaagaaaat
aaataaccctgctaaaagtagattagagattaagtagagagttttcaaaa
aatgaaacacacatggcaaagaaacattaaacatgtattcaagatctttg
ccatcaaagaaataaaagtaacagctactttgaaatttcatcaatttaca
ccaatcagaatggacacaatctataaaacaaataacagctcatgctggtg
aggctatggggtacaggaacaatcatccaatgctggtgagattgcaaaca
tgtgcaaccacaatgaaaatcagggtggctgtttctcaggaagctgggaa
ttcatcttcctcaagatcaaactactcttgggcatatacccaaataattt
ctcagtcagccacagaaaggcctgctcatccatgttcactgtggctctat
tcataatatccaggaattagtgacagctttgatttcgatgaaccactaaa
tggatagtgaaacgtggtacatttacacaatcgaatattattcagctatt
aaaatataatgaaatttgcaggtaaatggataaagctagaaaaagtcaca
gtgagtgtcttagtcagggtttcttttcctgcacaaacatcatgaccaag
aagcaagttggggaggaaagggtttattcagcttacagtcctcattgctg
ttcatcacaaaggatgtcagactggaactcaagcaggtcaggagcagagc
taatgcagagcatgagggatgttactactggctagctctctgcttgctca
gcttgctttcttatgaaccaagacacagccaggatgcacaccacatgggc
tggccctcttcccattgatcatattgaaatgcctacgctggatcctatga
gcattccgactgcagctcttcagtgtatcagcggtcagtaacgtaaccgt
gattgaacctggactaagactactgcatgtggtgccaggtgtcgggtact
gctcagtaatcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_65366785_65367958
seq2: B6Ng01-144E10.b_48_1195

seq1  GAATTCTGTCCCACTTAAGATCTCCCAACACATTTCCTTATAGAGTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCCCACTTAAGATCTCCCAACACATTTCCTTATAGAGTTTCA  50

seq1  AGCATGTGGCTGGGTGTGGTAGCCCCTGCTTGTCACTGCATTCTTGGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTGGCTGGGTGTGGTAGCCCCTGCTTGTCACTGCATTCTTGGAAC  100

seq1  CTGAGAAAGGAGGCTAACTGTGAGTTTCAGGCCAGCGTGGCCTCTAGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAAGGAGGCTAACTGTGAGTTTCAGGCCAGCGTGGCCTCTAGGGT  150

seq1  AAAAAACTCTCATTCCCCCAGAGAAAACAGAGTAAAACTGTACTTTTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACTCTCATTCCCCCAGAGAAAACAGAGTAAAACTGTACTTTTCAA  200

seq1  TGATTTAGAAATTCATCTATTTGCCTTTAGTTTTCTGCTTGGGAAATAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTAGAAATTCATCTATTTGCCTTTAGTTTTCTGCTTGGGAAATAAG  250

seq1  AAGTGTCTTCCTAAGTAACGTAATTAGTGCAGGGAGAAAGACCAAGGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTCTTCCTAAGTAACGTAATTAGTGCAGGGAGAAAGACCAAGGGAG  300

seq1  CACAGACTGCCAGGTGGGATGGGCATACTGTGATGAGTTCCAGAGGAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACTGCCAGGTGGGATGGGCATACTGTGATGAGTTCCAGAGGAGCC  350

seq1  AAGGCCATTTCCATGACCAGACCCTCTGCCTAGGAGAGTGTCTCACAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCATTTCCATGACCAGACCCTCTGCCTAGGAGAGTGTCTCACAAGC  400

seq1  CTCATTTTGCCAAGCCTGACTTCGTGGCGTAACAATGTCAGTTCTTAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTTGCCAAGCCTGACTTCGTGGCGTAACAATGTCAGTTCTTAGAT  450

seq1  GGACTGCTCACAGGACTCTGTGCCTAAGCTCAGCTTGGGCTGTAAGTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGCTCACAGGACTCTGTGCCTAAGCTCAGCTTGGGCTGTAAGTGCA  500

seq1  GATAGGGACATAGCTGCTCCTCTATGTAACCGTTCTGTCTAGGACCCGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGGACATAGCTGCTCCTCTATGTAACCGTTCTGTCTAGGACCCGTG  550

seq1  GGCAGCCGTGTGGCTGTAGCTATCTGCTACTTCTGAAGTGAAGCTGCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCCGTGTGGCTGTAGCTATCTGCTACTTCTGAAGTGAAGCTGCATT  600

seq1  TAAGAAGCTACTGTAAGGTCATGAGGAGGTCTGATGCTTTCTTCTGTCCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGCTACTGTAAGGTCATGAGGAGGTCTGATGCTTTCTTCTGTCCG  650

seq1  AGCGGGATCTAAGCAGCCGGCTTCTATGTCCTTATGTGTGGCTCCAGTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGGATCTAAGCAGCCGGCTTCTATGTCCTTATGTGTGGCTCCAGTCC  700

seq1  TTATGTATAGCACATAGAGATCATTCTAGAAGCAGTCATCTCTGCTCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTATAGCACATAGAGATCATTCTAGAAGCAGTCATCTCTGCTCTCT  750

seq1  TCAGAGAGGCTCAATTAAGAGCCTGGTTTTTAAATTTTATTTGTTTGTTT  800
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCAGAGAGGCTCAATTAAGAGCCTGG-TTTTAAATTTTATTTGTTTGTTT  799

seq1  GTTTTAAATTTTATTTGTATGTATTTACTTATCAAGACAGAGCTGACCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAATTTTATTTGTATGTATTTACTTATCAAGACAGAGCTGACCTG  849

seq1  G-AACTTGCAATCTTCTTGCCTCATGATCTCAAGTGCTAGGATTATAGGT  899
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTGCAATCTTCTTGCCTCATGATCTCAAGTGCTAGGATTATAGGT  899

seq1  ATATGTCACCACATGCAGACACACAAAAAAAGTC-TTTTTAAATGCCCTT  948
      |||||||||||||||||||||||| ||||||||| |||||||||||||||
seq2  ATATGTCACCACATGCAGACACAC-AAAAAAGTCTTTTTTAAATGCCCTT  948

seq1  GAAGACTCACAAAGGTGTCAGGCAGGCAAGGCTCAGCTTCGAGTTCCAAT  998
      ||||||||||||||| |||| ||| |||  ||||||||||||||||| ||
seq2  GAAGACTCACAAAGG-GTCA-GCA-GCA--GCTCAGCTTCGAGTTCC-AT  992

seq1  GATTAACAGAATTCAGTGACGATTTACCATTCATCTAGTGTTTATTGAGT  1048
      ||||||||| ||||||||||||||   ||||||||||||| |||||||||
seq2  GATTAACAG-ATTCAGTGACGATT--ACATTCATCTAGTG-TTATTGAGT  1038

seq1  C-TCTATTGTATACCAGGCACAGGTGTAGGTGCTGGGCTACAACAATCAA  1097
      | ||||||||||| |||||||||||||||||||| |||| |||||||| |
seq2  CTTCTATTGTATA-CAGGCACAGGTGTAGGTGCT-GGCTTCAACAATC-A  1085

seq1  GAAACATTTTCCTCCCTGGCCTTCAGAAGCTCCCATTGCTAGCTCTCAAA  1147
      |||||||||  |||||| ||  || |||||| ||||||||||| |||   
seq2  GAAACATTT--CTCCCTTGC--TC-GAAGCT-CCATTGCTAGC-CTC---  1125

seq1  AAGTCCAACACAGAACCAAAGCCCTTG  1174
      |||||    |||||| |||||||||||
seq2  AAGTC---AACAGAA-CAAAGCCCTTG  1148