BAC Information

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BAC

Clone NameB6Ng01-149G21
Chromosome3 (Build37)
Map Location 92,659,174 - 92,660,272
singlet/doubletsinglet
Overlap genenone
Upstream genePglyrp3, EG619750, Lor, A030004J04Rik, Sprr2a, LOC100042999, LOC545543, LOC100043005, LOC545545, LOC100042514, LOC619984, Sprr2b, Sprr2c, Sprr2d, Sprr2e, Sprr2f, Sprr2g, Sprr2h, Sprr2i, Sprr2j, LOC100043022, Sprr2k, Sprr1b, Sprr3, LOC100042575, Sprr1a, Sprr4, LOC100042581, Ivl, Smcp, Lce1a1, Lce1b, LOC620325, Lce1a2, Lce1c, Lce1d, LOC100043062, Lce1e, Lce1f, LOC668264, Lce1g, Lce1h, Lce1i, LOC545547, LOC631101, Kprp, Lce1l
Downstream gene2310050C09Rik, Lce3a, Lce3b, Lce3c, LOC630994, 2310001H18Rik, Lce3f, Crct1, Lce1m, EG229571, Crnn, EG229574, EG668300, LOC668304, Flg, LOC100042701, Hrnr, Rptn, EG383891, Tchh, Tchhl1, S100a11, S100a10, EG433623, Tdpoz2, Tdpoz1, LOC668325, LOC545550, EG436563, Tdpoz4, Tdpoz3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149G21.bB6Ng01-149G21.g
ACCDH945770DH945771
length1,0931,015
definitionDH945770|Mus musculus domesticus DNA, BAC clone: B6Ng01-149G21, 5' end.DH945771|Mus musculus domesticus DNA, BAC clone: B6Ng01-149G21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatacaacccatagaggcattaattcaatcagagattaatgtttt
atgttatgatcagagttttaactgtatccctcatatcactttatatcata
ttctcttcttcagtatttgatgtagctgttttaacgatgcagaaactctc
ccctattatctttcctcttttatacacttagatattcatatttctgcatc
catgtctgcacattttcagcatgtagtctttatctacagatggttacacc
ttgctttcccaaaaaacaaccttctctgtaattactactttctgtcttgt
gttaaagtagtgcagtacttgtttggacttctagatggaaagttttgtag
atacattgttgatgataagggtggtttccagtatctcccgatactgtatg
catttagtgtgatgctttgcatgcagagtgttttaacacatacttttaaa
tgagtcatgtctcattcttctgctagctttttatatatcagccaatggcc
ttaattgaaaacaccaagaaaaacaggatgaaatgaacactcctaattac
aacagatgatatcagttcttctcggaggtaagggagtcttgttgggtgga
atagaacttatttaaatacccaagcatgtgaggcaataacaatcagctgg
agagaagtagctctagtagctcttcaacttctaagtcgcagccttagttg
ggaacctcaatgcagagctttgtagacagtgccacagtgtgtttgctgat
gaacagaattacagctacagttttgggagagatggtacttcatcttggga
aatacacgtaccttacatttgcacaacttgtcttgtggggagcagcaatg
ccaatttaagtttcttccattccaaaactatccctttaaactaatatctt
aagcaactactgtctcttcattcagctatcctcttaaaaatactgtttta
ttccgtgagattttatacatgcaaatatgtatcttatcatactgacctct
tcatttcctccaggttcttctagataagcccatacctcctgttccaacgt
tcacatttcataattactgaattccatgaatagacccatgtac
gaattcattggtacaggagacaattttctgaacagaatagtcactaagat
caacaattaataaatgtgacctcatgaaactgaaaaggttctgtaaggca
aaagacactatcattagggcaaaatggcagcttacagatttgaaaaagac
cttcagcaacccttcatctgaccgagggtgaatatataaaatatataaag
aactaaagaagttagacactatcaaatcaagtaacccaataaaaaactgt
gtacagtgctaagcaatggaatatctaaagaggaaactcaaatgtctgag
aagcacttaaggaaatattcaacatcctcagttatcagtgaaatgcaaat
caaaatgacctaagtttattacaattagaatggctaaaatcaaatactca
agtgacagcatatgctggctaggttgtggagaaaggggaacactcctcca
tttctaacttgaacaactcctccattgcaaacttgaacaactactcagaa
aaccaatctggatttttctcagaaaactggtagtagttctatgtgacaac
tcagctatactgttcatggatgtacacctgagagatgctccaccatatca
caatgacatatgctccattgttttcaaagccaccttatttgtaataccca
gaagctagatggaacccagatgtccctcaagtaaagaatgggtacagaag
atgtggtacatttacagaatggaataatactattcagcaattcaaaacaa
gtacatcatgaattttccagtcaattaaatggaactagaaaatatcatcc
tcagtgaggtaacagactcaaaataaaaagcatggtatgcactcactggt
aagtagatatagccaaaaatgtacagacaacttatgacacacctcacagg
ctcaaagaacttaaagaagacgtccaagtgaggaagttgaatacagcgta
aatggcactaaaatatttatagagtagagagtaagagacataggtggtag
agtggatggggaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_92659174_92660272
seq2: B6Ng01-149G21.b_44_1136 (reverse)

seq1  GTACAT-GGTCTATTCATTGGATTCAGTAAATTATTGAAATGTG-ACGTT  48
      |||||| ||||||||||| | ||||||| ||||| ||||||||| |||||
seq2  GTACATGGGTCTATTCATGGAATTCAGT-AATTA-TGAAATGTGAACGTT  48

seq1  GGGACAGGA-GTATGGGCTTATCTAGAAGAA-CTGGAGGAAATGAAAGAG  96
      || |||||| ||||||||||||||||||||| |||||||||||| |||||
seq2  GGAACAGGAGGTATGGGCTTATCTAGAAGAACCTGGAGGAAATG-AAGAG  97

seq1  GTCAGTATGATAAGAATACATTATTTGCATGTATAAAATTCTCACGGAAT  146
      |||||||||||||| ||||| ||||||||||||||||| |||||||||||
seq2  GTCAGTATGATAAG-ATACA-TATTTGCATGTATAAAA-TCTCACGGAAT  144

seq1  AAAACAGTTATTTTTTAAGAGGATAGCTGAATGAAGAGAACAGTAGTTGC  196
      ||||||||   ||||||||||||||||||||||||||| |||||||||||
seq2  AAAACAGT--ATTTTTAAGAGGATAGCTGAATGAAGAG-ACAGTAGTTGC  191

seq1  TTAAGAATATTAGTTTAAAGGGATAGTTTTGGAATGGAAGAAACTTAAAT  246
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAG-ATATTAGTTTAAAGGGATAGTTTTGGAATGGAAGAAACTTAAAT  240

seq1  TGGCATTGCTGCTCCCCACAAGACAAGTTGTGCAAATGTAAGGTACGTGT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTGCTGCTCCCCACAAGACAAGTTGTGCAAATGTAAGGTACGTGT  290

seq1  ATTTCCCAAGATGAAGTACCATCTCTCCCAAAACTGTAGCTGTAATTCTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCAAGATGAAGTACCATCTCTCCCAAAACTGTAGCTGTAATTCTG  340

seq1  TTCATCAGCAAACACACTGTGGCACTGTCTACAAAGCTCTGCATTGAGGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCAGCAAACACACTGTGGCACTGTCTACAAAGCTCTGCATTGAGGT  390

seq1  TCCCAACTAAGGCTGCGACTTAGAAGTTGAAGAGCTACTAGAGCTACTTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACTAAGGCTGCGACTTAGAAGTTGAAGAGCTACTAGAGCTACTTC  440

seq1  TCTCCAGCTGATTGTTATTGCCTCACATGCTTGGGTATTTAAATAAGTTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGCTGATTGTTATTGCCTCACATGCTTGGGTATTTAAATAAGTTC  490

seq1  TATTCCACCCAACAAGACTCCCTTACCTCCGAGAAGAACTGATATCATCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCACCCAACAAGACTCCCTTACCTCCGAGAAGAACTGATATCATCT  540

seq1  GTTGTAATTAGGAGTGTTCATTTCATCCTGTTTTTCTTGGTGTTTTCAAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAATTAGGAGTGTTCATTTCATCCTGTTTTTCTTGGTGTTTTCAAT  590

seq1  TAAGGCCATTGGCTGATATATAAAAAGCTAGCAGAAGAATGAGACATGAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCCATTGGCTGATATATAAAAAGCTAGCAGAAGAATGAGACATGAC  640

seq1  TCATTTAAAAGTATGTGTTAAAACACTCTGCATGCAAAGCATCACACTAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAAAAGTATGTGTTAAAACACTCTGCATGCAAAGCATCACACTAA  690

seq1  ATGCATACAGTATCGGGAGATACTGGAAACCACCCTTATCATCAACAATG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATACAGTATCGGGAGATACTGGAAACCACCCTTATCATCAACAATG  740

seq1  TATCTACAAAACTTTCCATCTAGAAGTCCAAACAAGTACTGCACTACTTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTACAAAACTTTCCATCTAGAAGTCCAAACAAGTACTGCACTACTTT  790

seq1  AACACAAGACAGAAAGTAGTAATTACAGAGAAGGTTGTTTTTTGGGAAAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAGACAGAAAGTAGTAATTACAGAGAAGGTTGTTTTTTGGGAAAG  840

seq1  CAAGGTGTAACCATCTGTAGATAAAGACTACATGCTGAAAATGTGCAGAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTGTAACCATCTGTAGATAAAGACTACATGCTGAAAATGTGCAGAC  890

seq1  ATGGATGCAGAAATATGAATATCTAAGTGTATAAAAGAGGAAAGATAATA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGCAGAAATATGAATATCTAAGTGTATAAAAGAGGAAAGATAATA  940

seq1  GGGGAGAGTTTCTGCATCGTTAAAACAGCTACATCAAATACTGAAGAAGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGAGTTTCTGCATCGTTAAAACAGCTACATCAAATACTGAAGAAGA  990

seq1  GAATATGATATAAAGTGATATGAGGGATACAGTTAAAACTCTGATCATAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGATATAAAGTGATATGAGGGATACAGTTAAAACTCTGATCATAA  1040

seq1  CATAAAACATTAATCTCTGATTGAATTAATGCCTCTATGGGTTGTATGAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAACATTAATCTCTGATTGAATTAATGCCTCTATGGGTTGTATGAA  1090

seq1  TTC  1099
      |||
seq2  TTC  1093