BAC Information

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BAC

Clone NameB6Ng01-150E07
Chromosome3 (Build37)
Map Location 138,684,861 - 138,818,786
singlet/doubletdoublet
Overlap geneRap1gds1, EG229879
Upstream geneEG329763, LOC100039528, Mttp, Rg9mtd2, 4930579F01Rik, Adh7, Adh1, Adh6a, LOC639769, Adh4, Adh5, Metap1, EG383925, EG668879, Eif4e, EG545570, LOC668881, LOC668882, Ppia-ps3_1437.1, Tspan5, LOC620771
Downstream geneB930007M17Rik, LOC100039840, LOC229883
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150E07.bB6Ng01-150E07.g
ACCDH946391DH946392
length1,0901,108
definitionDH946391|Mus musculus domesticus DNA, BAC clone: B6Ng01-150E07, 5' end.DH946392|Mus musculus domesticus DNA, BAC clone: B6Ng01-150E07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(138,817,748 - 138,818,786)(138,684,861 - 138,685,980)
sequence
gaattcctaaatttatagtaattttaaagctcttttaataacactgcaat
ttagtcctttctgatagtcaaaactgcaatgagaattttgccagtcttta
gtgtcctggagttaactgcttctgatagtaagcaggcattctactactca
gagcatattccaagaggttgtaaagccattaaccaaagagcataaaaagg
gaacgaatgatttatcataggtgctaggacagaaaataaaatattggcag
agtttagctatgcaaaacatcactaataacttagttatggtttttaactc
tccatgaacctgtggatctgtgacaggtgatgaatgtttcgccagataaa
tactcctaatggtatgcgtgtaaatattatctgttaaaaacttctatttt
gatttatgatttaaatttatttgtaaacttgtgatgaactttttaccacg
tgatcatgtagcctgaaagatgtagaagtgctgaagacaaagagaagaat
cattcctctgtcccccgatttcttagagagctttcataggaaacgtttta
caacttagaaataaacccaaaattcacttctcaaagtgtccccttttctt
cctgtgcaggctgaaattagaggggcataactccgatggagatagaataa
aggcaacattacttaatctgttgttttaggatgaggtgctaagggccaga
gactgcagtttctgtcatcagaggatcacagaaggccagttagctacagt
accaaagcaacttagacttagataagcaaactttttattattatacagca
gccctaaatatcttgtaagacaaagtttttaccccacactcttccctctc
tgttgcctcaagaggaatcaagaataagaaagacctgtcaggctggcccc
aggcaactcagctgaatatttttgacacttttctatttggttgacatttg
aaatcactatgaaagaacaaccaaatgcaaactgatgaaaattacagaag
cacgtaaatgtcatgaatggtgttgaatgtcaatggccatgaatttccac
aatgaagaaattattcttgggtacattttaaggaaaatta
gaattccacttccttgtattttttcacttgtttctgcatctgaaagaaag
aaaaaatgccttctattaagttcagtaatacaaatgtgaactattcaaat
gacagcaaatgactcaagaacttcccctacctataatgaaagctcactca
tacacattggacctttcctctaaactatcttttgctgaataagctgcctt
tacctccagatttaatgtgcacaattcactacagcactatttgtttattt
ccagtcataccacaaatagagttttcttaatccatcaaccacaggacaac
cacttatttttagtcttagtttcaatggtatcaattcaggacaggaagtt
ttttcctacatcctttgtgaattcttagagcttgaacagtataattttat
atattttttatggttccctataaaggcatagtaccttgaaaatatcaatg
ataatgagtaaaactcctacctcataaacattttatgtaatgagtgatag
ctaagattacatacttccatatgatggccacattttaatataacttgtta
gaaatgctattaatataaagatctaggaaataaactccatgatattcaaa
actctgcttggtgatacagggattcaagagctcctagctgcttctcctac
agagccttaaataaacacaagttcctccaggtagctactactgaatgaat
aacctgttaaatcaaacggcaacgggttatctagatgatgacaaataagg
aaaagccaaaaaaattactatttgattatagtcaatgaggagaaatatgt
ttaatgagaaaattagagggctcattaaaatttccaattaaagcttgact
gtataatacactgacatactgttgttgtagatctctgaacacacacgtca
cagagatactgtgaattcttaccagacaggcagcacgcataatgaagcag
aaagtcatcccattcagtaactcaaaagcacacacagacgtgattcttca
tagctaatgcgaatgctgagaggtgttttgtttcagacacttttacattt
acttacttctgtgtgtgcgcagtgcacagccagctcttgcattacttgag
tatgtctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_138817748_138818786
seq2: B6Ng01-150E07.b_97_1133 (reverse)

seq1  TAATTTTCCTTTAAAAATGTA-CCAAGAATAATTTC-TCATTGTGGAAAA  48
      |||||||||||  |||||||| |||||||||||||| |||||||||||| 
seq2  TAATTTTCCTT--AAAATGTACCCAAGAATAATTTCTTCATTGTGGAAAT  48

seq1  TCAT-GCCAATGACATTCAACACCATTCATGACATTTACGTTGCTTCTGT  97
      |||| |||| |||||||||||||||||||||||||||||| |||||||||
seq2  TCATGGCCATTGACATTCAACACCATTCATGACATTTACG-TGCTTCTGT  97

seq1  AATTTTCATCAGTTTGCATTTTGTTGTTCTTTTCATAGTGATTTCAAATG  147
      ||||||||||||||||||||| ||||||| ||||||||||||||||||||
seq2  AATTTTCATCAGTTTGCATTTGGTTGTTC-TTTCATAGTGATTTCAAATG  146

seq1  TCAACCAAATAGAAAAGTGTCAAAAATATTCAGCTGAGTTGCCTGGGGCC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCAAATAGAAAAGTGTCAAAAATATTCAGCTGAGTTGCCTGGGGCC  196

seq1  AGCCCTGACAGGTCTTTCTTATTCTTGATTCCTCTTGAGGCAACAGAGAG  247
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AG-CCTGACAGGTCTTTCTTATTCTTGATTCCTCTTGAGGCAACAGAGAG  245

seq1  GGAAGAGTGTGGGGTAAAAACTTTGTCTTACAAGATATTTAGGGCTGCTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGTGTGGGGTAAAAACTTTGTCTTACAAGATATTTAGGGCTGCTG  295

seq1  TATAATAATAAAAAGTTTGCTTATCTAAGTCTAAGTTGCTTTGGTACTGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAATAAAAAGTTTGCTTATCTAAGTCTAAGTTGCTTTGGTACTGT  345

seq1  AGCTAACTGGCCTTCTGTGATCCTCTGATGACAGAAACTGCAGTCTCTGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAACTGGCCTTCTGTGATCCTCTGATGACAGAAACTGCAGTCTCTGG  395

seq1  CCCTTAGCACCTCATCCTAAAACAACAGATTAAGTAATGTTGCCTTTATT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAGCACCTCATCCTAAAACAACAGATTAAGTAATGTTGCCTTTATT  445

seq1  CTATCTCCATCGGAGTTATGCCCCTCTAATTTCAGCCTGCACAGGAAGAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTCCATCGGAGTTATGCCCCTCTAATTTCAGCCTGCACAGGAAGAA  495

seq1  AAGGGGACACTTTGAGAAGTGAATTTTGGGTTTATTTCTAAGTTGTAAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGACACTTTGAGAAGTGAATTTTGGGTTTATTTCTAAGTTGTAAAA  545

seq1  CGTTTCCTATGAAAGCTCTCTAAGAAATCGGGGGACAGAGGAATGATTCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTCCTATGAAAGCTCTCTAAGAAATCGGGGGACAGAGGAATGATTCT  595

seq1  TCTCTTTGTCTTCAGCACTTCTACATCTTTCAGGCTACATGATCACGTGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTGTCTTCAGCACTTCTACATCTTTCAGGCTACATGATCACGTGG  645

seq1  TAAAAAGTTCATCACAAGTTTACAAATAAATTTAAATCATAAATCAAAAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGTTCATCACAAGTTTACAAATAAATTTAAATCATAAATCAAAAT  695

seq1  AGAAGTTTTTAACAGATAATATTTACACGCATACCATTAGGAGTATTTAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTTTTAACAGATAATATTTACACGCATACCATTAGGAGTATTTAT  745

seq1  CTGGCGAAACATTCATCACCTGTCACAGATCCACAGGTTCATGGAGAGTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCGAAACATTCATCACCTGTCACAGATCCACAGGTTCATGGAGAGTT  795

seq1  AAAAACCATAACTAAGTTATTAGTGATGTTTTGCATAGCTAAACTCTGCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCATAACTAAGTTATTAGTGATGTTTTGCATAGCTAAACTCTGCC  845

seq1  AATATTTTATTTTCTGTCCTAGCACCTATGATAAATCATTCGTTCCCTTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTATTTTCTGTCCTAGCACCTATGATAAATCATTCGTTCCCTTT  895

seq1  TTATGCTCTTTGGTTAATGGCTTTACAACCTCTTGGAATATGCTCTGAGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCTCTTTGGTTAATGGCTTTACAACCTCTTGGAATATGCTCTGAGT  945

seq1  AGTAGAATGCCTGCTTACTATCAGAAGCAGTTAACTCCAGGACACTAAAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAATGCCTGCTTACTATCAGAAGCAGTTAACTCCAGGACACTAAAG  995

seq1  ACTGGCAAAATTCTCATTGCAGTTTTGACTATCAGAAAGGAC  1039
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCAAAATTCTCATTGCAGTTTTGACTATCAGAAAGGAC  1037

seq1: chr3_138684861_138685980
seq2: B6Ng01-150E07.g_69_1176

seq1  GAATTCCACTTCCTTGTATTTTTTCACTTGTTTCTGCATCTGAAAGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTTCCTTGTATTTTTTCACTTGTTTCTGCATCTGAAAGAAAG  50

seq1  AAAAAATGCCTTCTATTAAGTTCAGTAATACAAATGTGAACTATTCAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGCCTTCTATTAAGTTCAGTAATACAAATGTGAACTATTCAAAT  100

seq1  GACAGCAAATGACTCAAGAACTTCCCCTACCTATAATGAAAGCTCACTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCAAATGACTCAAGAACTTCCCCTACCTATAATGAAAGCTCACTCA  150

seq1  TACACATTGGACCTTTCCTCTAAACTATCTTTTGCTGAATAAGCTGCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATTGGACCTTTCCTCTAAACTATCTTTTGCTGAATAAGCTGCCTT  200

seq1  TACCTCCAGATTTAATGTGCACAATTCACTACAGCACTATTTGTTTATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCAGATTTAATGTGCACAATTCACTACAGCACTATTTGTTTATTT  250

seq1  CCAGTCATACCACAAATAGAGTTTTCTTAATCCATCAACCACAGGACAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCATACCACAAATAGAGTTTTCTTAATCCATCAACCACAGGACAAC  300

seq1  CACTTATTTTTAGTCTTAGTTTCAATGGTATCAATTCAGGACAGGAAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTATTTTTAGTCTTAGTTTCAATGGTATCAATTCAGGACAGGAAGTT  350

seq1  TTTTCCTACATCCTTTGTGAATTCTTAGAGCTTGAACAGTATAATTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTACATCCTTTGTGAATTCTTAGAGCTTGAACAGTATAATTTTAT  400

seq1  ATATTTTTTATGGTTCCCTATAAAGGCATAGTACCTTGAAAATATCAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTTATGGTTCCCTATAAAGGCATAGTACCTTGAAAATATCAATG  450

seq1  ATAATGAGTAAAACTCCTACCTCATAAACATTTTATGTAATGAGTGATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGAGTAAAACTCCTACCTCATAAACATTTTATGTAATGAGTGATAG  500

seq1  CTAAGATTACATACTTCCATATGATGGCCACATTTTAATATAACTTGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATTACATACTTCCATATGATGGCCACATTTTAATATAACTTGTTA  550

seq1  GAAATGCTATTAATATAAAGATCTAGGAAATAAACTCCATGATATTCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCTATTAATATAAAGATCTAGGAAATAAACTCCATGATATTCAAA  600

seq1  ACTCTGCTTGGTGATACAGGGATTCAAGAGCTCCTAGCTGCTTCTCCTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCTTGGTGATACAGGGATTCAAGAGCTCCTAGCTGCTTCTCCTAC  650

seq1  AGAGCCTTAAATAAACACAAGTTCCTCCAGGTAGCTACTACTGAATGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTTAAATAAACACAAGTTCCTCCAGGTAGCTACTACTGAATGAAT  700

seq1  AACCTGTTAAATCAAACGGCAACGGGTTATCTAGATGATGACAAATAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTTAAATCAAACGGCAACGGGTTATCTAGATGATGACAAATAAGG  750

seq1  AAAAGCCAAAAAAATTACTATTTGATTATAGTCAATGAGGAGAAATATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCAAAAAAATTACTATTTGATTATAGTCAATGAGGAGAAATATGT  800

seq1  TTAATGAGAAAATTAGAGGGCTCATTAAAATTTCCAATTAAAGCTTGACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGAGAAAATTAGAGGGCTCATTAAAATTTCCAATTAAAGCTTGACT  850

seq1  GTATAATACACTGACATACTGTTGTTGTAGATCTCTGAACACACACGTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAATACACTGACATACTGTTGTTGTAGATCTCTGAACACACACGTCA  900

seq1  CAGAGAATACTGTGAATTCTTACCAGACAGGCAGCACGCATAATGAAGCA  950
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAG-ATACTGTGAATTCTTACCAGACAGGCAGCACGCATAATGAAGCA  949

seq1  GGAAAGTCATCCCCATTCAGGTAACTCAAAAGCACACACAGACGTGGATT  1000
       ||||||||| |||||||| ||||||||||||||||||||||||| ||||
seq2  -GAAAGTCAT-CCCATTCA-GTAACTCAAAAGCACACACAGACGT-GATT  995

seq1  CCTTCATAGCTAATGCGGAATGCTGAGAGGTGTTTTTGTCTTCAAGACAC  1050
       ||||||||||||||| ||||||||||||||| |||||| ||| ||||||
seq2  -CTTCATAGCTAATGC-GAATGCTGAGAGGTG-TTTTGT-TTC-AGACAC  1040

seq1  TTTTACATTTACTTACTTCTGTGTGTGCGCAAGTGCACAGGCACGCTCTT  1100
      |||||||||||||||||||||||||||||| ||||||||| || ||||||
seq2  TTTTACATTTACTTACTTCTGTGTGTGCGC-AGTGCACAGCCA-GCTCTT  1088

seq1  GCATTACTAGAGTATGTCTG  1120
      |||||||| |||||||||||
seq2  GCATTACTTGAGTATGTCTG  1108